RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 DMAC1Q96GE9 116 aa6.47□□□□□ -1.37
VPS33A-202ENST00000451053 M0R2T5 61 aa6.45□□□□□ -1.38
VPS33A-202ENST00000451053 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
VPS33A-202ENST00000451053 ACYP2P14621 99 aa6.43□□□□□ -1.38
VPS33A-202ENST00000451053 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
VPS33A-202ENST00000451053 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
VPS33A-202ENST00000451053 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
VPS33A-202ENST00000451053 S4R3F8 94 aa6.35□□□□□ -1.39
VPS33A-202ENST00000451053 CHKB-CPT1BH3BT56 60 aa6.33□□□□□ -1.4
VPS33A-202ENST00000451053 COA5Q86WW8 74 aa6.31□□□□□ -1.4
VPS33A-202ENST00000451053 SPTSSBQ8NFR3 76 aa6.29□□□□□ -1.4
VPS33A-202ENST00000451053 LCA10Q71F78 164 aa6.28□□□□□ -1.4
VPS33A-202ENST00000451053 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
VPS33A-202ENST00000451053 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
VPS33A-202ENST00000451053 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
VPS33A-202ENST00000451053 MT2AP02795 61 aa6.22□□□□□ -1.41
VPS33A-202ENST00000451053 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
VPS33A-202ENST00000451053 MT1FP04733 61 aa6.17□□□□□ -1.42
VPS33A-202ENST00000451053 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
VPS33A-202ENST00000451053 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
VPS33A-202ENST00000451053 SMIM26A0A096LP01 95 aa6.09□□□□□ -1.43
VPS33A-202ENST00000451053 H0YAA0 97 aa6.08□□□□□ -1.44
VPS33A-202ENST00000451053 SEC61GP60059 68 aa6.06□□□□□ -1.44
VPS33A-202ENST00000451053 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
VPS33A-202ENST00000451053 V9GYY9 64 aa6.05□□□□□ -1.44
VPS33A-202ENST00000451053 ADM2Q7Z4H4 148 aa6.02□□□□□ -1.45
VPS33A-202ENST00000451053 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
VPS33A-202ENST00000451053 A0A1B0GU69 56 aa6.01□□□□□ -1.45
VPS33A-202ENST00000451053 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
VPS33A-202ENST00000451053 Q1T7F1 81 aa5.99□□□□□ -1.45
VPS33A-202ENST00000451053 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
VPS33A-202ENST00000451053 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
VPS33A-202ENST00000451053 P0C880 135 aa5.92□□□□□ -1.46
VPS33A-202ENST00000451053 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
VPS33A-202ENST00000451053 USH2AO75445 5202 aa5.92□□□□□ -1.46
VPS33A-202ENST00000451053 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
VPS33A-202ENST00000451053 A0A1B0GU33 70 aa5.87□□□□□ -1.47
VPS33A-202ENST00000451053 PSPHP1O15172 72 aa5.86□□□□□ -1.47
VPS33A-202ENST00000451053 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
VPS33A-202ENST00000451053 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
VPS33A-202ENST00000451053 M0QZ58 72 aa5.85□□□□□ -1.47
VPS33A-202ENST00000451053 R4GN34 69 aa5.85□□□□□ -1.47
VPS33A-202ENST00000451053 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
VPS33A-202ENST00000451053 Q5VV11 94 aa5.81□□□□□ -1.48
VPS33A-202ENST00000451053 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
VPS33A-202ENST00000451053 UQCR11O14957 56 aa5.8□□□□□ -1.48
VPS33A-202ENST00000451053 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
VPS33A-202ENST00000451053 KRTAP19-8Q3LI54 63 aa5.78□□□□□ -1.48
VPS33A-202ENST00000451053 MT1BP07438 61 aa5.75□□□□□ -1.49
VPS33A-202ENST00000451053 A6NED7 52 aa5.74□□□□□ -1.49
VPS33A-202ENST00000451053 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
VPS33A-202ENST00000451053 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
VPS33A-202ENST00000451053 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
VPS33A-202ENST00000451053 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
VPS33A-202ENST00000451053 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
VPS33A-202ENST00000451053 A6NN06 94 aa5.65□□□□□ -1.5
VPS33A-202ENST00000451053 A0A0D9SG42 100 aa5.64□□□□□ -1.51
VPS33A-202ENST00000451053 FCGBPQ9Y6R7 5405 aaPredicted RBP5.62□□□□□ -1.51
VPS33A-202ENST00000451053 A8MU10 97 aa5.61□□□□□ -1.51
VPS33A-202ENST00000451053 CDC42SE1Q9NRR8 79 aa5.61□□□□□ -1.51
VPS33A-202ENST00000451053 PLAC4Q8WY50 150 aa5.59□□□□□ -1.51
VPS33A-202ENST00000451053 K7ERS5 55 aa5.55□□□□□ -1.52
VPS33A-202ENST00000451053 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
VPS33A-202ENST00000451053 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
VPS33A-202ENST00000451053 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
VPS33A-202ENST00000451053 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
VPS33A-202ENST00000451053 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
VPS33A-202ENST00000451053 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
VPS33A-202ENST00000451053 MT1XP80297 61 aa5.47□□□□□ -1.53
VPS33A-202ENST00000451053 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
VPS33A-202ENST00000451053 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
VPS33A-202ENST00000451053 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
VPS33A-202ENST00000451053 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
VPS33A-202ENST00000451053 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
VPS33A-202ENST00000451053 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
VPS33A-202ENST00000451053 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
VPS33A-202ENST00000451053 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
VPS33A-202ENST00000451053 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
VPS33A-202ENST00000451053 ROMO1P60602 79 aa5.23□□□□□ -1.57
VPS33A-202ENST00000451053 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
VPS33A-202ENST00000451053 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
VPS33A-202ENST00000451053 KRTAP6-3Q3LI67 103 aa5.19□□□□□ -1.58
VPS33A-202ENST00000451053 TNP1P09430 55 aa5.18□□□□□ -1.58
VPS33A-202ENST00000451053 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
VPS33A-202ENST00000451053 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
VPS33A-202ENST00000451053 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
VPS33A-202ENST00000451053 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
VPS33A-202ENST00000451053 KMT2DO14686 5537 aa5.13□□□□□ -1.59
VPS33A-202ENST00000451053 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
VPS33A-202ENST00000451053 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
VPS33A-202ENST00000451053 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
VPS33A-202ENST00000451053 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
VPS33A-202ENST00000451053 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
VPS33A-202ENST00000451053 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
VPS33A-202ENST00000451053 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
VPS33A-202ENST00000451053 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
VPS33A-202ENST00000451053 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
VPS33A-202ENST00000451053 KTN1-AS1Q86SY8 53 aa4.96□□□□□ -1.62
VPS33A-202ENST00000451053 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
VPS33A-202ENST00000451053 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms