RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
HLA-DRB9-201ENST00000449413 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
HLA-DRB9-201ENST00000449413 ACYP2P14621 99 aa6.34□□□□□ -1.39
HLA-DRB9-201ENST00000449413 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
HLA-DRB9-201ENST00000449413 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
HLA-DRB9-201ENST00000449413 COA5Q86WW8 74 aa6.32□□□□□ -1.4
HLA-DRB9-201ENST00000449413 S4R3F8 94 aa6.29□□□□□ -1.4
HLA-DRB9-201ENST00000449413 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
HLA-DRB9-201ENST00000449413 MT1HP80294 61 aa6.28□□□□□ -1.4
HLA-DRB9-201ENST00000449413 SERP1Q9Y6X1 66 aa6.28□□□□□ -1.4
HLA-DRB9-201ENST00000449413 CHKB-CPT1BH3BT56 60 aa6.27□□□□□ -1.41
HLA-DRB9-201ENST00000449413 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
HLA-DRB9-201ENST00000449413 LCA10Q71F78 164 aa6.25□□□□□ -1.41
HLA-DRB9-201ENST00000449413 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
HLA-DRB9-201ENST00000449413 KRTAP3-3Q9BYR6 98 aa6.19□□□□□ -1.42
HLA-DRB9-201ENST00000449413 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
HLA-DRB9-201ENST00000449413 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
HLA-DRB9-201ENST00000449413 SSPOA2VEC9 5147 aa6.15□□□□□ -1.42
HLA-DRB9-201ENST00000449413 M0R2T5 61 aa6.12□□□□□ -1.43
HLA-DRB9-201ENST00000449413 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
HLA-DRB9-201ENST00000449413 USH2AO75445 5202 aa6.11□□□□□ -1.43
HLA-DRB9-201ENST00000449413 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
HLA-DRB9-201ENST00000449413 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
HLA-DRB9-201ENST00000449413 H0YAA0 97 aa6.01□□□□□ -1.45
HLA-DRB9-201ENST00000449413 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
HLA-DRB9-201ENST00000449413 Q1T7F1 81 aa5.99□□□□□ -1.45
HLA-DRB9-201ENST00000449413 V9GYY9 64 aa5.99□□□□□ -1.45
HLA-DRB9-201ENST00000449413 A0A1B0GU69 56 aa5.96□□□□□ -1.46
HLA-DRB9-201ENST00000449413 SEC61GP60059 68 aa5.96□□□□□ -1.46
HLA-DRB9-201ENST00000449413 ADM2Q7Z4H4 148 aa5.96□□□□□ -1.46
HLA-DRB9-201ENST00000449413 MACF1Q9UPN3 7388 aaKnown RBP5.95□□□□□ -1.46
HLA-DRB9-201ENST00000449413 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
HLA-DRB9-201ENST00000449413 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
HLA-DRB9-201ENST00000449413 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
HLA-DRB9-201ENST00000449413 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
HLA-DRB9-201ENST00000449413 P0C880 135 aa5.9□□□□□ -1.46
HLA-DRB9-201ENST00000449413 PSPHP1O15172 72 aa5.89□□□□□ -1.47
HLA-DRB9-201ENST00000449413 MT2AP02795 61 aa5.89□□□□□ -1.47
HLA-DRB9-201ENST00000449413 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
HLA-DRB9-201ENST00000449413 Q5VV11 94 aa5.86□□□□□ -1.47
HLA-DRB9-201ENST00000449413 MT1FP04733 61 aa5.85□□□□□ -1.47
HLA-DRB9-201ENST00000449413 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
HLA-DRB9-201ENST00000449413 A0A1B0GU33 70 aa5.8□□□□□ -1.48
HLA-DRB9-201ENST00000449413 LCE2BO14633 110 aa5.79□□□□□ -1.48
HLA-DRB9-201ENST00000449413 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
HLA-DRB9-201ENST00000449413 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
HLA-DRB9-201ENST00000449413 R4GN34 69 aa5.77□□□□□ -1.49
HLA-DRB9-201ENST00000449413 M0QZ58 72 aa5.76□□□□□ -1.49
HLA-DRB9-201ENST00000449413 UQCR11O14957 56 aa5.75□□□□□ -1.49
HLA-DRB9-201ENST00000449413 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
HLA-DRB9-201ENST00000449413 A6NED7 52 aa5.73□□□□□ -1.49
HLA-DRB9-201ENST00000449413 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
HLA-DRB9-201ENST00000449413 KRTAP9-3Q9BYQ3 159 aa5.71□□□□□ -1.5
HLA-DRB9-201ENST00000449413 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
HLA-DRB9-201ENST00000449413 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
HLA-DRB9-201ENST00000449413 MIR22HGQ0VDD5 57 aa5.67□□□□□ -1.5
HLA-DRB9-201ENST00000449413 NEBP20929 6669 aa5.66□□□□□ -1.5
HLA-DRB9-201ENST00000449413 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
HLA-DRB9-201ENST00000449413 A8MU10 97 aa5.63□□□□□ -1.51
HLA-DRB9-201ENST00000449413 A0A0D9SG42 100 aa5.62□□□□□ -1.51
HLA-DRB9-201ENST00000449413 CDC42SE1Q9NRR8 79 aa5.61□□□□□ -1.51
HLA-DRB9-201ENST00000449413 KRTAP20-1Q3LI63 56 aa5.59□□□□□ -1.51
HLA-DRB9-201ENST00000449413 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
HLA-DRB9-201ENST00000449413 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
HLA-DRB9-201ENST00000449413 A6NN06 94 aa5.56□□□□□ -1.52
HLA-DRB9-201ENST00000449413 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
HLA-DRB9-201ENST00000449413 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
HLA-DRB9-201ENST00000449413 MT1BP07438 61 aa5.51□□□□□ -1.53
HLA-DRB9-201ENST00000449413 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
HLA-DRB9-201ENST00000449413 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
HLA-DRB9-201ENST00000449413 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
HLA-DRB9-201ENST00000449413 K7ERS5 55 aa5.45□□□□□ -1.54
HLA-DRB9-201ENST00000449413 MDN1Q9NU22 5596 aa5.4□□□□□ -1.55
HLA-DRB9-201ENST00000449413 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
HLA-DRB9-201ENST00000449413 PRO0628Q9UI54 55 aa5.35□□□□□ -1.55
HLA-DRB9-201ENST00000449413 KMT2DO14686 5537 aa5.34□□□□□ -1.55
HLA-DRB9-201ENST00000449413 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
HLA-DRB9-201ENST00000449413 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
HLA-DRB9-201ENST00000449413 MT1XP80297 61 aa5.3□□□□□ -1.56
HLA-DRB9-201ENST00000449413 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
HLA-DRB9-201ENST00000449413 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
HLA-DRB9-201ENST00000449413 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
HLA-DRB9-201ENST00000449413 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
HLA-DRB9-201ENST00000449413 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
HLA-DRB9-201ENST00000449413 ROMO1P60602 79 aa5.2□□□□□ -1.58
HLA-DRB9-201ENST00000449413 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
HLA-DRB9-201ENST00000449413 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
HLA-DRB9-201ENST00000449413 TNP1P09430 55 aa5.09□□□□□ -1.59
HLA-DRB9-201ENST00000449413 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
HLA-DRB9-201ENST00000449413 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
HLA-DRB9-201ENST00000449413 SPRR2EP22531 72 aa5.03□□□□□ -1.6
HLA-DRB9-201ENST00000449413 SPRR2BP35325 72 aa5.03□□□□□ -1.6
HLA-DRB9-201ENST00000449413 SPRR2AP35326 72 aa5.03□□□□□ -1.6
HLA-DRB9-201ENST00000449413 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
HLA-DRB9-201ENST00000449413 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
HLA-DRB9-201ENST00000449413 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
HLA-DRB9-201ENST00000449413 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
HLA-DRB9-201ENST00000449413 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
HLA-DRB9-201ENST00000449413 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
HLA-DRB9-201ENST00000449413 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms