RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
VIPAS39-203ENST00000448935 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
VIPAS39-203ENST00000448935 DMBT1Q9UGM3 2413 aaPredicted RBP5.68□□□□□ -1.5
VIPAS39-203ENST00000448935 V9GYY9 64 aa5.66□□□□□ -1.5
VIPAS39-203ENST00000448935 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
VIPAS39-203ENST00000448935 A8MUN3 132 aa5.64□□□□□ -1.51
VIPAS39-203ENST00000448935 Q1T7F1 81 aa5.64□□□□□ -1.51
VIPAS39-203ENST00000448935 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
VIPAS39-203ENST00000448935 SEC61GP60059 68 aa5.63□□□□□ -1.51
VIPAS39-203ENST00000448935 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
VIPAS39-203ENST00000448935 SPINK7P58062 85 aa5.63□□□□□ -1.51
VIPAS39-203ENST00000448935 CHKB-CPT1BH3BT56 60 aa5.62□□□□□ -1.51
VIPAS39-203ENST00000448935 PRO0628Q9UI54 55 aa5.62□□□□□ -1.51
VIPAS39-203ENST00000448935 KRTAP9-9Q9BYP9 154 aa5.61□□□□□ -1.51
VIPAS39-203ENST00000448935 C4orf26Q17RF5 130 aa5.59□□□□□ -1.51
VIPAS39-203ENST00000448935 MYCBP2O75592 4640 aa5.56□□□□□ -1.52
VIPAS39-203ENST00000448935 KRTAP9-3Q9BYQ3 159 aa5.56□□□□□ -1.52
VIPAS39-203ENST00000448935 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
VIPAS39-203ENST00000448935 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
VIPAS39-203ENST00000448935 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
VIPAS39-203ENST00000448935 KRTAP9-2Q9BYQ4 174 aa5.52□□□□□ -1.53
VIPAS39-203ENST00000448935 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
VIPAS39-203ENST00000448935 PSPHP1O15172 72 aa5.49□□□□□ -1.53
VIPAS39-203ENST00000448935 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
VIPAS39-203ENST00000448935 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
VIPAS39-203ENST00000448935 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
VIPAS39-203ENST00000448935 Q5VV11 94 aa5.45□□□□□ -1.54
VIPAS39-203ENST00000448935 A0A1B0GU69 56 aa5.42□□□□□ -1.54
VIPAS39-203ENST00000448935 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
VIPAS39-203ENST00000448935 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
VIPAS39-203ENST00000448935 A6NED7 52 aa5.37□□□□□ -1.55
VIPAS39-203ENST00000448935 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
VIPAS39-203ENST00000448935 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
VIPAS39-203ENST00000448935 S4R3F8 94 aa5.34□□□□□ -1.55
VIPAS39-203ENST00000448935 LRP2P98164 4655 aa5.31□□□□□ -1.56
VIPAS39-203ENST00000448935 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
VIPAS39-203ENST00000448935 LCA10Q71F78 164 aa5.3□□□□□ -1.56
VIPAS39-203ENST00000448935 LPAP08519 4548 aa5.29□□□□□ -1.56
VIPAS39-203ENST00000448935 UQCR11O14957 56 aa5.29□□□□□ -1.56
VIPAS39-203ENST00000448935 PMAIP1Q13794 54 aa5.29□□□□□ -1.56
VIPAS39-203ENST00000448935 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
VIPAS39-203ENST00000448935 CSAG1Q6PB30 78 aa5.23□□□□□ -1.57
VIPAS39-203ENST00000448935 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
VIPAS39-203ENST00000448935 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
VIPAS39-203ENST00000448935 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
VIPAS39-203ENST00000448935 A0A1B0GU33 70 aa5.2□□□□□ -1.58
VIPAS39-203ENST00000448935 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
VIPAS39-203ENST00000448935 NDUFAF8A1L188 74 aa5.17□□□□□ -1.58
VIPAS39-203ENST00000448935 A8MU10 97 aa5.17□□□□□ -1.58
VIPAS39-203ENST00000448935 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
VIPAS39-203ENST00000448935 H0YAA0 97 aa5.13□□□□□ -1.59
VIPAS39-203ENST00000448935 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
VIPAS39-203ENST00000448935 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
VIPAS39-203ENST00000448935 ADM2Q7Z4H4 148 aa5.11□□□□□ -1.59
VIPAS39-203ENST00000448935 KRTAP19-2Q3LHN2 52 aa5.1□□□□□ -1.59
VIPAS39-203ENST00000448935 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
VIPAS39-203ENST00000448935 P0C880 135 aa5.06□□□□□ -1.6
VIPAS39-203ENST00000448935 A6NN06 94 aa5.04□□□□□ -1.6
VIPAS39-203ENST00000448935 K7ERS5 55 aa5.03□□□□□ -1.6
VIPAS39-203ENST00000448935 M0QZ58 72 aa5.02□□□□□ -1.61
VIPAS39-203ENST00000448935 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
VIPAS39-203ENST00000448935 KRTAP13-4Q3LI77 160 aa4.98□□□□□ -1.61
VIPAS39-203ENST00000448935 R4GN34 69 aa4.95□□□□□ -1.62
VIPAS39-203ENST00000448935 A0A0D9SG42 100 aa4.94□□□□□ -1.62
VIPAS39-203ENST00000448935 MUC2Q02817 5179 aa4.91□□□□□ -1.62
VIPAS39-203ENST00000448935 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.62
VIPAS39-203ENST00000448935 CRIPTQ9P021 101 aa4.89□□□□□ -1.63
VIPAS39-203ENST00000448935 M0R2T5 61 aa4.87□□□□□ -1.63
VIPAS39-203ENST00000448935 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
VIPAS39-203ENST00000448935 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
VIPAS39-203ENST00000448935 MT1HP80294 61 aa4.85□□□□□ -1.63
VIPAS39-203ENST00000448935 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
VIPAS39-203ENST00000448935 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
VIPAS39-203ENST00000448935 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
VIPAS39-203ENST00000448935 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
VIPAS39-203ENST00000448935 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
VIPAS39-203ENST00000448935 MT3P25713 68 aa4.81□□□□□ -1.64
VIPAS39-203ENST00000448935 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
VIPAS39-203ENST00000448935 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
VIPAS39-203ENST00000448935 ROMO1P60602 79 aa4.78□□□□□ -1.64
VIPAS39-203ENST00000448935 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
VIPAS39-203ENST00000448935 FSIP2Q5CZC0 6907 aa4.73□□□□□ -1.65
VIPAS39-203ENST00000448935 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
VIPAS39-203ENST00000448935 MT2AP02795 61 aa4.69□□□□□ -1.66
VIPAS39-203ENST00000448935 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
VIPAS39-203ENST00000448935 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
VIPAS39-203ENST00000448935 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
VIPAS39-203ENST00000448935 MT1FP04733 61 aa4.65□□□□□ -1.66
VIPAS39-203ENST00000448935 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
VIPAS39-203ENST00000448935 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
VIPAS39-203ENST00000448935 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
VIPAS39-203ENST00000448935 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
VIPAS39-203ENST00000448935 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
VIPAS39-203ENST00000448935 TNP1P09430 55 aa4.46□□□□□ -1.69
VIPAS39-203ENST00000448935 MT1BP07438 61 aa4.44□□□□□ -1.7
VIPAS39-203ENST00000448935 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
VIPAS39-203ENST00000448935 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
VIPAS39-203ENST00000448935 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
VIPAS39-203ENST00000448935 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
VIPAS39-203ENST00000448935 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms