RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 S4R3F8 94 aa6.72□□□□□ -1.33
GTF3C3-206ENST00000448539 H3BPC8 53 aa6.69□□□□□ -1.34
GTF3C3-206ENST00000448539 MT1FP04733 61 aa6.69□□□□□ -1.34
GTF3C3-206ENST00000448539 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
GTF3C3-206ENST00000448539 FAM236AA0A1B0GUQ0 79 aa6.66□□□□□ -1.34
GTF3C3-206ENST00000448539 FAM236BA0A1B0GV22 79 aa6.66□□□□□ -1.34
GTF3C3-206ENST00000448539 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
GTF3C3-206ENST00000448539 LCA10Q71F78 164 aa6.65□□□□□ -1.34
GTF3C3-206ENST00000448539 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
GTF3C3-206ENST00000448539 KLKP1Q107X0 134 aa6.64□□□□□ -1.35
GTF3C3-206ENST00000448539 USH2AO75445 5202 aa6.63□□□□□ -1.35
GTF3C3-206ENST00000448539 SSPOA2VEC9 5147 aa6.61□□□□□ -1.35
GTF3C3-206ENST00000448539 A8MUN3 132 aa6.61□□□□□ -1.35
GTF3C3-206ENST00000448539 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
GTF3C3-206ENST00000448539 LCE3BQ5TA77 95 aa6.6□□□□□ -1.35
GTF3C3-206ENST00000448539 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
GTF3C3-206ENST00000448539 NDUFC1O43677 76 aa6.55□□□□□ -1.36
GTF3C3-206ENST00000448539 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
GTF3C3-206ENST00000448539 DMAC1Q96GE9 116 aa6.47□□□□□ -1.37
GTF3C3-206ENST00000448539 SERP2Q8N6R1 65 aa6.46□□□□□ -1.38
GTF3C3-206ENST00000448539 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.38
GTF3C3-206ENST00000448539 SNURFQ9Y675 71 aa6.44□□□□□ -1.38
GTF3C3-206ENST00000448539 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
GTF3C3-206ENST00000448539 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
GTF3C3-206ENST00000448539 C20orf197Q8N268 126 aa6.42□□□□□ -1.38
GTF3C3-206ENST00000448539 ACYP2P14621 99 aa6.4□□□□□ -1.38
GTF3C3-206ENST00000448539 H0YAA0 97 aa6.38□□□□□ -1.39
GTF3C3-206ENST00000448539 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.39
GTF3C3-206ENST00000448539 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
GTF3C3-206ENST00000448539 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
GTF3C3-206ENST00000448539 COX7CP15954 63 aa6.32□□□□□ -1.4
GTF3C3-206ENST00000448539 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
GTF3C3-206ENST00000448539 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
GTF3C3-206ENST00000448539 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
GTF3C3-206ENST00000448539 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
GTF3C3-206ENST00000448539 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
GTF3C3-206ENST00000448539 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-206ENST00000448539 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
GTF3C3-206ENST00000448539 Q5VV11 94 aa6.27□□□□□ -1.41
GTF3C3-206ENST00000448539 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
GTF3C3-206ENST00000448539 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
GTF3C3-206ENST00000448539 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
GTF3C3-206ENST00000448539 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
GTF3C3-206ENST00000448539 MT1BP07438 61 aa6.19□□□□□ -1.42
GTF3C3-206ENST00000448539 P0C880 135 aa6.19□□□□□ -1.42
GTF3C3-206ENST00000448539 R4GN34 69 aa6.19□□□□□ -1.42
GTF3C3-206ENST00000448539 H7BZZ5 65 aa6.15□□□□□ -1.42
GTF3C3-206ENST00000448539 M0QZ58 72 aa6.14□□□□□ -1.43
GTF3C3-206ENST00000448539 COA5Q86WW8 74 aa6.14□□□□□ -1.43
GTF3C3-206ENST00000448539 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
GTF3C3-206ENST00000448539 A6NN06 94 aa6.1□□□□□ -1.43
GTF3C3-206ENST00000448539 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
GTF3C3-206ENST00000448539 KRTAP6-3Q3LI67 103 aa6.07□□□□□ -1.44
GTF3C3-206ENST00000448539 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
GTF3C3-206ENST00000448539 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
GTF3C3-206ENST00000448539 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
GTF3C3-206ENST00000448539 SEC61GP60059 68 aa6.02□□□□□ -1.45
GTF3C3-206ENST00000448539 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
GTF3C3-206ENST00000448539 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
GTF3C3-206ENST00000448539 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
GTF3C3-206ENST00000448539 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
GTF3C3-206ENST00000448539 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
GTF3C3-206ENST00000448539 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
GTF3C3-206ENST00000448539 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
GTF3C3-206ENST00000448539 TMEM258P61165 79 aa5.88□□□□□ -1.47
GTF3C3-206ENST00000448539 A0A1B0GU69 56 aa5.86□□□□□ -1.47
GTF3C3-206ENST00000448539 MT1XP80297 61 aa5.86□□□□□ -1.47
GTF3C3-206ENST00000448539 NEBP20929 6669 aa5.85□□□□□ -1.47
GTF3C3-206ENST00000448539 MUC12Q9UKN1 5478 aa5.85□□□□□ -1.47
GTF3C3-206ENST00000448539 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
GTF3C3-206ENST00000448539 A0A1B0GU33 70 aa5.84□□□□□ -1.47
GTF3C3-206ENST00000448539 KRTAP4-11Q9BYQ6 195 aa5.82□□□□□ -1.48
GTF3C3-206ENST00000448539 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
GTF3C3-206ENST00000448539 KRTAP4-2Q9BYR5 136 aa5.78□□□□□ -1.48
GTF3C3-206ENST00000448539 A0A0D9SG42 100 aa5.77□□□□□ -1.49
GTF3C3-206ENST00000448539 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
GTF3C3-206ENST00000448539 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
GTF3C3-206ENST00000448539 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
GTF3C3-206ENST00000448539 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
GTF3C3-206ENST00000448539 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
GTF3C3-206ENST00000448539 KRTAP20-1Q3LI63 56 aa5.7□□□□□ -1.5
GTF3C3-206ENST00000448539 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
GTF3C3-206ENST00000448539 SPINT4Q6UDR6 99 aa5.69□□□□□ -1.5
GTF3C3-206ENST00000448539 KMT2DO14686 5537 aa5.67□□□□□ -1.5
GTF3C3-206ENST00000448539 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
GTF3C3-206ENST00000448539 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
GTF3C3-206ENST00000448539 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
GTF3C3-206ENST00000448539 A8MU10 97 aa5.6□□□□□ -1.51
GTF3C3-206ENST00000448539 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
GTF3C3-206ENST00000448539 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
GTF3C3-206ENST00000448539 UQCR11O14957 56 aa5.56□□□□□ -1.52
GTF3C3-206ENST00000448539 PCP4P48539 62 aa5.56□□□□□ -1.52
GTF3C3-206ENST00000448539 V9GYY9 64 aa5.56□□□□□ -1.52
GTF3C3-206ENST00000448539 SPRR2FQ96RM1 72 aa5.54□□□□□ -1.52
GTF3C3-206ENST00000448539 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
GTF3C3-206ENST00000448539 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
GTF3C3-206ENST00000448539 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
GTF3C3-206ENST00000448539 SPRR2EP22531 72 aa5.49□□□□□ -1.53
GTF3C3-206ENST00000448539 SPRR2BP35325 72 aa5.49□□□□□ -1.53
GTF3C3-206ENST00000448539 SPRR2AP35326 72 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms