RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 FLGP20930 4061 aaPredicted RBP9.67□□□□□ -0.86
SGCE-207ENST00000447873 ACYP2P14621 99 aa9.65□□□□□ -0.86
SGCE-207ENST00000447873 TMEM258P61165 79 aa9.63□□□□□ -0.87
SGCE-207ENST00000447873 S4R3F8 94 aa9.6□□□□□ -0.87
SGCE-207ENST00000447873 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
SGCE-207ENST00000447873 MT1HP80294 61 aa9.56□□□□□ -0.88
SGCE-207ENST00000447873 LCA10Q71F78 164 aa9.54□□□□□ -0.88
SGCE-207ENST00000447873 M0R2T5 61 aa9.5□□□□□ -0.89
SGCE-207ENST00000447873 CHKB-CPT1BH3BT56 60 aa9.5□□□□□ -0.89
SGCE-207ENST00000447873 COA5Q86WW8 74 aa9.48□□□□□ -0.89
SGCE-207ENST00000447873 CSAG1Q6PB30 78 aa9.43□□□□□ -0.9
SGCE-207ENST00000447873 LCE2AQ5TA79 106 aaPredicted RBP9.41□□□□□ -0.9
SGCE-207ENST00000447873 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
SGCE-207ENST00000447873 SERP1Q9Y6X1 66 aa9.33□□□□□ -0.92
SGCE-207ENST00000447873 KRTAP10-6P60371 365 aaPredicted RBP9.26□□□□□ -0.93
SGCE-207ENST00000447873 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.93
SGCE-207ENST00000447873 H0YAA0 97 aa9.16□□□□□ -0.94
SGCE-207ENST00000447873 KRTAP9-8Q9BYQ0 159 aa9.16□□□□□ -0.94
SGCE-207ENST00000447873 RPS28P62857 69 aaKnown RBP9.15□□□□□ -0.95
SGCE-207ENST00000447873 ADM2Q7Z4H4 148 aa9.13□□□□□ -0.95
SGCE-207ENST00000447873 MT2AP02795 61 aa9.11□□□□□ -0.95
SGCE-207ENST00000447873 SEC61GP60059 68 aa9.06□□□□□ -0.96
SGCE-207ENST00000447873 KRTAP10-10P60014 251 aa9.05□□□□□ -0.96
SGCE-207ENST00000447873 SMIM26A0A096LP01 95 aa9.04□□□□□ -0.96
SGCE-207ENST00000447873 MT1FP04733 61 aa9.04□□□□□ -0.96
SGCE-207ENST00000447873 P0C880 135 aa9.01□□□□□ -0.97
SGCE-207ENST00000447873 A0A1B0GU69 56 aa9□□□□□ -0.97
SGCE-207ENST00000447873 LINC01558Q9Y6Z2 57 aa9□□□□□ -0.97
SGCE-207ENST00000447873 V9GYY9 64 aa8.95□□□□□ -0.98
SGCE-207ENST00000447873 PRR15LQ9BU68 103 aa8.95□□□□□ -0.98
SGCE-207ENST00000447873 Q1T7F1 81 aa8.94□□□□□ -0.98
SGCE-207ENST00000447873 CRIPTQ9P021 101 aa8.9□□□□□ -0.99
SGCE-207ENST00000447873 KRTAP9-3Q9BYQ3 159 aa8.84□□□□□ -0.99
SGCE-207ENST00000447873 R4GN34 69 aa8.84□□□□□ -0.99
SGCE-207ENST00000447873 A0A1B0GU33 70 aa8.82□□□□□ -1
SGCE-207ENST00000447873 PSPHP1O15172 72 aa8.82□□□□□ -1
SGCE-207ENST00000447873 M0QZ58 72 aa8.81□□□□□ -1
SGCE-207ENST00000447873 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
SGCE-207ENST00000447873 SPRR2GQ9BYE4 73 aa8.76□□□□□ -1.01
SGCE-207ENST00000447873 KRTAP13-4Q3LI77 160 aa8.71□□□□□ -1.02
SGCE-207ENST00000447873 Q5VV11 94 aa8.71□□□□□ -1.02
SGCE-207ENST00000447873 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
SGCE-207ENST00000447873 KRTAP4-8Q9BYQ9 185 aa8.68□□□□□ -1.02
SGCE-207ENST00000447873 UQCR11O14957 56 aa8.66□□□□□ -1.02
SGCE-207ENST00000447873 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
SGCE-207ENST00000447873 KRTAP19-8Q3LI54 63 aa8.57□□□□□ -1.04
SGCE-207ENST00000447873 A6NED7 52 aa8.56□□□□□ -1.04
SGCE-207ENST00000447873 A0A0D9SG42 100 aa8.56□□□□□ -1.04
SGCE-207ENST00000447873 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.56□□□□□ -1.04
SGCE-207ENST00000447873 USH2AO75445 5202 aa8.55□□□□□ -1.04
SGCE-207ENST00000447873 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
SGCE-207ENST00000447873 KRTAP9-2Q9BYQ4 174 aa8.53□□□□□ -1.04
SGCE-207ENST00000447873 A8MU10 97 aa8.51□□□□□ -1.05
SGCE-207ENST00000447873 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
SGCE-207ENST00000447873 MT1BP07438 61 aa8.48□□□□□ -1.05
SGCE-207ENST00000447873 A6NN06 94 aa8.47□□□□□ -1.05
SGCE-207ENST00000447873 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
SGCE-207ENST00000447873 FSIP2Q5CZC0 6907 aa8.42□□□□□ -1.06
SGCE-207ENST00000447873 SPINT4Q6UDR6 99 aa8.39□□□□□ -1.07
SGCE-207ENST00000447873 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
SGCE-207ENST00000447873 KRTAP12-2P59991 146 aa8.34□□□□□ -1.07
SGCE-207ENST00000447873 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.07
SGCE-207ENST00000447873 SSPOA2VEC9 5147 aa8.3□□□□□ -1.08
SGCE-207ENST00000447873 CAMK2N1Q7Z7J9 78 aa8.26□□□□□ -1.09
SGCE-207ENST00000447873 K7ERS5 55 aa8.24□□□□□ -1.09
SGCE-207ENST00000447873 BRK1Q8WUW1 75 aa8.22□□□□□ -1.09
SGCE-207ENST00000447873 KRTAP19-6Q3LI70 58 aa8.2□□□□□ -1.1
SGCE-207ENST00000447873 LCE3BQ5TA77 95 aa8.18□□□□□ -1.1
SGCE-207ENST00000447873 CRCT1Q9UGL9 99 aa8.18□□□□□ -1.1
SGCE-207ENST00000447873 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
SGCE-207ENST00000447873 MT1XP80297 61 aa8.14□□□□□ -1.11
SGCE-207ENST00000447873 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
SGCE-207ENST00000447873 KRTAP4-8A0A0G2JLE6 195 aa8.1□□□□□ -1.11
SGCE-207ENST00000447873 KRTAP9-9Q9BYP9 154 aa8.1□□□□□ -1.11
SGCE-207ENST00000447873 KRTAP9-4Q9BYQ2 154 aa8.1□□□□□ -1.11
SGCE-207ENST00000447873 KRTAP4-12Q9BQ66 201 aa8.06□□□□□ -1.12
SGCE-207ENST00000447873 FCGBPQ9Y6R7 5405 aaPredicted RBP8.01□□□□□ -1.13
SGCE-207ENST00000447873 C10orf95Q9H7T3 257 aa7.94□□□□□ -1.14
SGCE-207ENST00000447873 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
SGCE-207ENST00000447873 PRO0628Q9UI54 55 aa7.84□□□□□ -1.15
SGCE-207ENST00000447873 ROMO1P60602 79 aa7.81□□□□□ -1.16
SGCE-207ENST00000447873 KRTAP10-7P60409 375 aaPredicted RBP7.8□□□□□ -1.16
SGCE-207ENST00000447873 TNP1P09430 55 aa7.79□□□□□ -1.16
SGCE-207ENST00000447873 PMAIP1Q13794 54 aa7.76□□□□□ -1.17
SGCE-207ENST00000447873 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
SGCE-207ENST00000447873 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
SGCE-207ENST00000447873 MACF1Q9UPN3 7388 aaKnown RBP7.68□□□□□ -1.18
SGCE-207ENST00000447873 LCE1DQ5T752 114 aa7.67□□□□□ -1.18
SGCE-207ENST00000447873 KMT2DO14686 5537 aa7.63□□□□□ -1.19
SGCE-207ENST00000447873 KRTAP4-9Q9BYQ8 210 aa7.54□□□□□ -1.2
SGCE-207ENST00000447873 KRTAP4-2Q9BYR5 136 aa7.54□□□□□ -1.2
SGCE-207ENST00000447873 SYNE2Q8WXH0 6885 aaKnown RBP7.51□□□□□ -1.21
SGCE-207ENST00000447873 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
SGCE-207ENST00000447873 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
SGCE-207ENST00000447873 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
SGCE-207ENST00000447873 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
SGCE-207ENST00000447873 KTN1-AS1Q86SY8 53 aa7.32□□□□□ -1.24
SGCE-207ENST00000447873 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
SGCE-207ENST00000447873 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
SGCE-207ENST00000447873 SVIPQ8NHG7 77 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms