RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 H3BPC8 53 aa5.29□□□□□ -1.56
CDCA3-203ENST00000446553 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
CDCA3-203ENST00000446553 H0Y9P7 68 aa5.27□□□□□ -1.57
CDCA3-203ENST00000446553 COX7CP15954 63 aa5.27□□□□□ -1.57
CDCA3-203ENST00000446553 LOC101927531A0A1B0GV80 90 aa5.25□□□□□ -1.57
CDCA3-203ENST00000446553 C4orf26Q17RF5 130 aa5.25□□□□□ -1.57
CDCA3-203ENST00000446553 C1orf64Q8NEQ6 169 aa5.24□□□□□ -1.57
CDCA3-203ENST00000446553 LINC00208Q96KT6 92 aa5.23□□□□□ -1.57
CDCA3-203ENST00000446553 C20orf197Q8N268 126 aa5.21□□□□□ -1.58
CDCA3-203ENST00000446553 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
CDCA3-203ENST00000446553 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
CDCA3-203ENST00000446553 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
CDCA3-203ENST00000446553 CYP4F30PQ9H0H9 118 aa5.2□□□□□ -1.58
CDCA3-203ENST00000446553 NDUFC1O43677 76 aa5.17□□□□□ -1.58
CDCA3-203ENST00000446553 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
CDCA3-203ENST00000446553 S4R3F8 94 aa5.17□□□□□ -1.58
CDCA3-203ENST00000446553 CCDC179H3BU77 68 aa5.16□□□□□ -1.58
CDCA3-203ENST00000446553 SNURFQ9Y675 71 aa5.16□□□□□ -1.58
CDCA3-203ENST00000446553 LCA10Q71F78 164 aa5.13□□□□□ -1.59
CDCA3-203ENST00000446553 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
CDCA3-203ENST00000446553 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
CDCA3-203ENST00000446553 H7BZZ5 65 aa5.1□□□□□ -1.59
CDCA3-203ENST00000446553 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
CDCA3-203ENST00000446553 SPANXA2-OT1Q8N9U9 137 aa5.08□□□□□ -1.6
CDCA3-203ENST00000446553 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
CDCA3-203ENST00000446553 MT1BP07438 61 aa5.07□□□□□ -1.6
CDCA3-203ENST00000446553 Q5VV11 94 aa5.07□□□□□ -1.6
CDCA3-203ENST00000446553 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
CDCA3-203ENST00000446553 A8MUN3 132 aa5.05□□□□□ -1.6
CDCA3-203ENST00000446553 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
CDCA3-203ENST00000446553 A6NN06 94 aa5.03□□□□□ -1.6
CDCA3-203ENST00000446553 TMEM258P61165 79 aa5.03□□□□□ -1.6
CDCA3-203ENST00000446553 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
CDCA3-203ENST00000446553 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
CDCA3-203ENST00000446553 H0YAA0 97 aa4.99□□□□□ -1.61
CDCA3-203ENST00000446553 ACYP2P14621 99 aa4.99□□□□□ -1.61
CDCA3-203ENST00000446553 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
CDCA3-203ENST00000446553 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
CDCA3-203ENST00000446553 NEBP20929 6669 aa4.92□□□□□ -1.62
CDCA3-203ENST00000446553 CHKB-CPT1BH3BT56 60 aa4.89□□□□□ -1.63
CDCA3-203ENST00000446553 COA5Q86WW8 74 aa4.89□□□□□ -1.63
CDCA3-203ENST00000446553 KMT2DO14686 5537 aa4.87□□□□□ -1.63
CDCA3-203ENST00000446553 KRTAP5-9P26371 169 aa4.87□□□□□ -1.63
CDCA3-203ENST00000446553 RPS28P62857 69 aaKnown RBP4.87□□□□□ -1.63
CDCA3-203ENST00000446553 SPTSSBQ8NFR3 76 aa4.87□□□□□ -1.63
CDCA3-203ENST00000446553 SERP1Q9Y6X1 66 aa4.87□□□□□ -1.63
CDCA3-203ENST00000446553 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
CDCA3-203ENST00000446553 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
CDCA3-203ENST00000446553 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
CDCA3-203ENST00000446553 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
CDCA3-203ENST00000446553 R4GN34 69 aa4.75□□□□□ -1.65
CDCA3-203ENST00000446553 MT1XP80297 61 aa4.74□□□□□ -1.65
CDCA3-203ENST00000446553 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
CDCA3-203ENST00000446553 P0C880 135 aa4.72□□□□□ -1.65
CDCA3-203ENST00000446553 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
CDCA3-203ENST00000446553 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
CDCA3-203ENST00000446553 SEC61GP60059 68 aa4.7□□□□□ -1.66
CDCA3-203ENST00000446553 V9GYY9 64 aa4.7□□□□□ -1.66
CDCA3-203ENST00000446553 KRTAP3-2Q9BYR7 98 aa4.69□□□□□ -1.66
CDCA3-203ENST00000446553 M0QZ58 72 aa4.68□□□□□ -1.66
CDCA3-203ENST00000446553 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
CDCA3-203ENST00000446553 Q1T7F1 81 aa4.67□□□□□ -1.66
CDCA3-203ENST00000446553 A0A1B0GU69 56 aa4.65□□□□□ -1.67
CDCA3-203ENST00000446553 PRR15LQ9BU68 103 aa4.65□□□□□ -1.67
CDCA3-203ENST00000446553 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
CDCA3-203ENST00000446553 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
CDCA3-203ENST00000446553 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
CDCA3-203ENST00000446553 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
CDCA3-203ENST00000446553 SPRR2EP22531 72 aa4.58□□□□□ -1.68
CDCA3-203ENST00000446553 SPRR2BP35325 72 aa4.58□□□□□ -1.68
CDCA3-203ENST00000446553 SPRR2AP35326 72 aa4.58□□□□□ -1.68
CDCA3-203ENST00000446553 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
CDCA3-203ENST00000446553 A0A1B0GU33 70 aa4.56□□□□□ -1.68
CDCA3-203ENST00000446553 PSPHP1O15172 72 aa4.55□□□□□ -1.68
CDCA3-203ENST00000446553 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
CDCA3-203ENST00000446553 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
CDCA3-203ENST00000446553 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
CDCA3-203ENST00000446553 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
CDCA3-203ENST00000446553 UQCR11O14957 56 aa4.5□□□□□ -1.69
CDCA3-203ENST00000446553 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
CDCA3-203ENST00000446553 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
CDCA3-203ENST00000446553 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
CDCA3-203ENST00000446553 A6NED7 52 aa4.44□□□□□ -1.7
CDCA3-203ENST00000446553 SPRR2DP22532 72 aa4.44□□□□□ -1.7
CDCA3-203ENST00000446553 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
CDCA3-203ENST00000446553 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
CDCA3-203ENST00000446553 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
CDCA3-203ENST00000446553 A0A0D9SG42 100 aa4.36□□□□□ -1.71
CDCA3-203ENST00000446553 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
CDCA3-203ENST00000446553 A8MU10 97 aa4.34□□□□□ -1.71
CDCA3-203ENST00000446553 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
CDCA3-203ENST00000446553 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
CDCA3-203ENST00000446553 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
CDCA3-203ENST00000446553 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
CDCA3-203ENST00000446553 K7ERS5 55 aa4.29□□□□□ -1.72
CDCA3-203ENST00000446553 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
CDCA3-203ENST00000446553 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
CDCA3-203ENST00000446553 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
CDCA3-203ENST00000446553 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
CDCA3-203ENST00000446553 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms