RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
SSBP3-208ENST00000444533 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
SSBP3-208ENST00000444533 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
SSBP3-208ENST00000444533 LCA10Q71F78 164 aa6.74□□□□□ -1.33
SSBP3-208ENST00000444533 SERP2Q8N6R1 65 aa6.73□□□□□ -1.33
SSBP3-208ENST00000444533 MT2AP02795 61 aa6.72□□□□□ -1.33
SSBP3-208ENST00000444533 NDUFC1O43677 76 aa6.71□□□□□ -1.34
SSBP3-208ENST00000444533 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
SSBP3-208ENST00000444533 MT1FP04733 61 aa6.66□□□□□ -1.34
SSBP3-208ENST00000444533 C20orf197Q8N268 126 aa6.66□□□□□ -1.34
SSBP3-208ENST00000444533 DMAC1Q96GE9 116 aa6.65□□□□□ -1.34
SSBP3-208ENST00000444533 SNURFQ9Y675 71 aa6.65□□□□□ -1.34
SSBP3-208ENST00000444533 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
SSBP3-208ENST00000444533 ACYP2P14621 99 aa6.62□□□□□ -1.35
SSBP3-208ENST00000444533 COX7CP15954 63 aa6.59□□□□□ -1.35
SSBP3-208ENST00000444533 KRTAP4-12Q9BQ66 201 aa6.57□□□□□ -1.36
SSBP3-208ENST00000444533 SPANXA2-OT1Q8N9U9 137 aa6.56□□□□□ -1.36
SSBP3-208ENST00000444533 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
SSBP3-208ENST00000444533 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
SSBP3-208ENST00000444533 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
SSBP3-208ENST00000444533 CHKB-CPT1BH3BT56 60 aa6.54□□□□□ -1.36
SSBP3-208ENST00000444533 H0YAA0 97 aa6.51□□□□□ -1.37
SSBP3-208ENST00000444533 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
SSBP3-208ENST00000444533 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
SSBP3-208ENST00000444533 CRIPTQ9P021 101 aa6.47□□□□□ -1.37
SSBP3-208ENST00000444533 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
SSBP3-208ENST00000444533 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
SSBP3-208ENST00000444533 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
SSBP3-208ENST00000444533 SEC61GP60059 68 aa6.42□□□□□ -1.38
SSBP3-208ENST00000444533 H7BZZ5 65 aa6.39□□□□□ -1.39
SSBP3-208ENST00000444533 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
SSBP3-208ENST00000444533 COA5Q86WW8 74 aa6.34□□□□□ -1.39
SSBP3-208ENST00000444533 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
SSBP3-208ENST00000444533 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
SSBP3-208ENST00000444533 Q5VV11 94 aa6.33□□□□□ -1.4
SSBP3-208ENST00000444533 R4GN34 69 aa6.33□□□□□ -1.4
SSBP3-208ENST00000444533 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
SSBP3-208ENST00000444533 CYSTM1Q9H1C7 97 aa6.32□□□□□ -1.4
SSBP3-208ENST00000444533 USH2AO75445 5202 aa6.29□□□□□ -1.4
SSBP3-208ENST00000444533 P0C880 135 aa6.28□□□□□ -1.4
SSBP3-208ENST00000444533 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
SSBP3-208ENST00000444533 M0QZ58 72 aa6.25□□□□□ -1.41
SSBP3-208ENST00000444533 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
SSBP3-208ENST00000444533 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
SSBP3-208ENST00000444533 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
SSBP3-208ENST00000444533 KRTAP19-6Q3LI70 58 aa6.21□□□□□ -1.42
SSBP3-208ENST00000444533 TMEM258P61165 79 aa6.18□□□□□ -1.42
SSBP3-208ENST00000444533 MT1BP07438 61 aa6.17□□□□□ -1.42
SSBP3-208ENST00000444533 LINC01554Q52M75 96 aa6.17□□□□□ -1.42
SSBP3-208ENST00000444533 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
SSBP3-208ENST00000444533 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
SSBP3-208ENST00000444533 V9GYY9 64 aa6.15□□□□□ -1.42
SSBP3-208ENST00000444533 A6NN06 94 aa6.13□□□□□ -1.43
SSBP3-208ENST00000444533 H3BS24 57 aa6.09□□□□□ -1.43
SSBP3-208ENST00000444533 A0A1B0GU69 56 aa6.08□□□□□ -1.44
SSBP3-208ENST00000444533 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
SSBP3-208ENST00000444533 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
SSBP3-208ENST00000444533 PRR15LQ9BU68 103 aa6.04□□□□□ -1.44
SSBP3-208ENST00000444533 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
SSBP3-208ENST00000444533 A0A1B0GU33 70 aa6.03□□□□□ -1.44
SSBP3-208ENST00000444533 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
SSBP3-208ENST00000444533 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
SSBP3-208ENST00000444533 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
SSBP3-208ENST00000444533 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
SSBP3-208ENST00000444533 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
SSBP3-208ENST00000444533 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
SSBP3-208ENST00000444533 A0A0D9SG42 100 aa5.91□□□□□ -1.46
SSBP3-208ENST00000444533 SPATA8Q6RVD6 105 aa5.91□□□□□ -1.46
SSBP3-208ENST00000444533 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
SSBP3-208ENST00000444533 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
SSBP3-208ENST00000444533 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
SSBP3-208ENST00000444533 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
SSBP3-208ENST00000444533 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
SSBP3-208ENST00000444533 MT1XP80297 61 aa5.87□□□□□ -1.47
SSBP3-208ENST00000444533 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
SSBP3-208ENST00000444533 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
SSBP3-208ENST00000444533 SPINT4Q6UDR6 99 aa5.84□□□□□ -1.47
SSBP3-208ENST00000444533 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
SSBP3-208ENST00000444533 UQCR11O14957 56 aa5.8□□□□□ -1.48
SSBP3-208ENST00000444533 Q1T7F1 81 aa5.74□□□□□ -1.49
SSBP3-208ENST00000444533 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
SSBP3-208ENST00000444533 A8MU10 97 aa5.73□□□□□ -1.49
SSBP3-208ENST00000444533 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
SSBP3-208ENST00000444533 KRTAP6-3Q3LI67 103 aa5.73□□□□□ -1.49
SSBP3-208ENST00000444533 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
SSBP3-208ENST00000444533 PSPHP1O15172 72 aa5.7□□□□□ -1.5
SSBP3-208ENST00000444533 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
SSBP3-208ENST00000444533 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
SSBP3-208ENST00000444533 MIR22HGQ0VDD5 57 aa5.67□□□□□ -1.5
SSBP3-208ENST00000444533 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
SSBP3-208ENST00000444533 K7ERS5 55 aa5.63□□□□□ -1.51
SSBP3-208ENST00000444533 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
SSBP3-208ENST00000444533 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
SSBP3-208ENST00000444533 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
SSBP3-208ENST00000444533 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
SSBP3-208ENST00000444533 A6NED7 52 aa5.58□□□□□ -1.52
SSBP3-208ENST00000444533 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
SSBP3-208ENST00000444533 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
SSBP3-208ENST00000444533 TNP1P09430 55 aa5.49□□□□□ -1.53
SSBP3-208ENST00000444533 KMT2DO14686 5537 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms