RNA–Protein interactions for RNA: ENST00000442929.1

FAM3A-214, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-214ENST00000442929 LCA10Q71F78 164 aa9.1□□□□□ -0.95
FAM3A-214ENST00000442929 SERP2Q8N6R1 65 aa9.08□□□□□ -0.96
FAM3A-214ENST00000442929 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
FAM3A-214ENST00000442929 MT1FP04733 61 aa9.02□□□□□ -0.97
FAM3A-214ENST00000442929 NDUFC1O43677 76 aa9.01□□□□□ -0.97
FAM3A-214ENST00000442929 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
FAM3A-214ENST00000442929 C20orf197Q8N268 126 aa8.96□□□□□ -0.98
FAM3A-214ENST00000442929 SNURFQ9Y675 71 aa8.95□□□□□ -0.98
FAM3A-214ENST00000442929 KRTAP3-3Q9BYR6 98 aa8.93□□□□□ -0.98
FAM3A-214ENST00000442929 ACYP2P14621 99 aa8.89□□□□□ -0.99
FAM3A-214ENST00000442929 COX7CP15954 63 aa8.89□□□□□ -0.99
FAM3A-214ENST00000442929 KRTAP9-3Q9BYQ3 159 aa8.87□□□□□ -0.99
FAM3A-214ENST00000442929 SPANXA2-OT1Q8N9U9 137 aa8.86□□□□□ -0.99
FAM3A-214ENST00000442929 ANAPC13Q9BS18 74 aa8.82□□□□□ -1
FAM3A-214ENST00000442929 SSPOA2VEC9 5147 aa8.82□□□□□ -1
FAM3A-214ENST00000442929 H0YAA0 97 aa8.81□□□□□ -1
FAM3A-214ENST00000442929 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
FAM3A-214ENST00000442929 FCGBPQ9Y6R7 5405 aaPredicted RBP8.76□□□□□ -1.01
FAM3A-214ENST00000442929 USH2AO75445 5202 aa8.76□□□□□ -1.01
FAM3A-214ENST00000442929 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
FAM3A-214ENST00000442929 CRIPTQ9P021 101 aa8.73□□□□□ -1.01
FAM3A-214ENST00000442929 LCE2BO14633 110 aa8.72□□□□□ -1.01
FAM3A-214ENST00000442929 ADM2Q7Z4H4 148 aa8.68□□□□□ -1.02
FAM3A-214ENST00000442929 MACF1Q9UPN3 7388 aaKnown RBP8.64□□□□□ -1.03
FAM3A-214ENST00000442929 H7BZZ5 65 aa8.63□□□□□ -1.03
FAM3A-214ENST00000442929 SYNE2Q8WXH0 6885 aaKnown RBP8.63□□□□□ -1.03
FAM3A-214ENST00000442929 SPRR2GQ9BYE4 73 aa8.61□□□□□ -1.03
FAM3A-214ENST00000442929 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
FAM3A-214ENST00000442929 CYSTM1Q9H1C7 97 aa8.56□□□□□ -1.04
FAM3A-214ENST00000442929 COA5Q86WW8 74 aa8.55□□□□□ -1.04
FAM3A-214ENST00000442929 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
FAM3A-214ENST00000442929 Q5VV11 94 aa8.52□□□□□ -1.05
FAM3A-214ENST00000442929 R4GN34 69 aa8.5□□□□□ -1.05
FAM3A-214ENST00000442929 ATP5EP56381 51 aaPredicted RBP8.49□□□□□ -1.05
FAM3A-214ENST00000442929 P0C880 135 aa8.47□□□□□ -1.05
FAM3A-214ENST00000442929 KRTAP19-8Q3LI54 63 aa8.47□□□□□ -1.05
FAM3A-214ENST00000442929 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
FAM3A-214ENST00000442929 KRTAP19-6Q3LI70 58 aa8.42□□□□□ -1.06
FAM3A-214ENST00000442929 M0QZ58 72 aa8.41□□□□□ -1.06
FAM3A-214ENST00000442929 SEC61GP60059 68 aa8.38□□□□□ -1.07
FAM3A-214ENST00000442929 MT1BP07438 61 aa8.37□□□□□ -1.07
FAM3A-214ENST00000442929 TMEM258P61165 79 aa8.35□□□□□ -1.07
FAM3A-214ENST00000442929 KRTAP6-3Q3LI67 103 aa8.33□□□□□ -1.08
FAM3A-214ENST00000442929 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
FAM3A-214ENST00000442929 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
FAM3A-214ENST00000442929 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
FAM3A-214ENST00000442929 A6NN06 94 aa8.24□□□□□ -1.09
FAM3A-214ENST00000442929 NEBP20929 6669 aa8.18□□□□□ -1.1
FAM3A-214ENST00000442929 A0A1B0GU69 56 aa8.17□□□□□ -1.1
FAM3A-214ENST00000442929 KRTAP10-5P60370 271 aa8.16□□□□□ -1.1
FAM3A-214ENST00000442929 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.1
FAM3A-214ENST00000442929 KRTAP20-1Q3LI63 56 aa8.12□□□□□ -1.11
FAM3A-214ENST00000442929 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
FAM3A-214ENST00000442929 A0A1B0GU33 70 aa8.09□□□□□ -1.11
FAM3A-214ENST00000442929 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
FAM3A-214ENST00000442929 LINC01558Q9Y6Z2 57 aa8□□□□□ -1.13
FAM3A-214ENST00000442929 PCP4P48539 62 aa7.98□□□□□ -1.13
FAM3A-214ENST00000442929 MUC12Q9UKN1 5478 aa7.98□□□□□ -1.13
FAM3A-214ENST00000442929 MT1XP80297 61 aa7.96□□□□□ -1.14
FAM3A-214ENST00000442929 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
FAM3A-214ENST00000442929 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
FAM3A-214ENST00000442929 A0A0D9SG42 100 aa7.91□□□□□ -1.14
FAM3A-214ENST00000442929 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
FAM3A-214ENST00000442929 V9GYY9 64 aa7.89□□□□□ -1.15
FAM3A-214ENST00000442929 SPINT4Q6UDR6 99 aa7.81□□□□□ -1.16
FAM3A-214ENST00000442929 UQCR11O14957 56 aa7.8□□□□□ -1.16
FAM3A-214ENST00000442929 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
FAM3A-214ENST00000442929 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
FAM3A-214ENST00000442929 Q1T7F1 81 aa7.75□□□□□ -1.17
FAM3A-214ENST00000442929 A8MU10 97 aa7.71□□□□□ -1.18
FAM3A-214ENST00000442929 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.18
FAM3A-214ENST00000442929 MDN1Q9NU22 5596 aa7.7□□□□□ -1.18
FAM3A-214ENST00000442929 KRTAP2-3P0C7H8 128 aa7.68□□□□□ -1.18
FAM3A-214ENST00000442929 KRTAP2-4Q9BYR9 128 aa7.68□□□□□ -1.18
FAM3A-214ENST00000442929 KMT2DO14686 5537 aa7.66□□□□□ -1.18
FAM3A-214ENST00000442929 PSPHP1O15172 72 aa7.65□□□□□ -1.18
FAM3A-214ENST00000442929 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
FAM3A-214ENST00000442929 KRTAP5-9P26371 169 aa7.61□□□□□ -1.19
FAM3A-214ENST00000442929 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
FAM3A-214ENST00000442929 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
FAM3A-214ENST00000442929 KRTAP8-1Q8IUC2 63 aa7.57□□□□□ -1.2
FAM3A-214ENST00000442929 K7ERS5 55 aa7.52□□□□□ -1.21
FAM3A-214ENST00000442929 A6NED7 52 aa7.49□□□□□ -1.21
FAM3A-214ENST00000442929 SPRR2FQ96RM1 72 aa7.44□□□□□ -1.22
FAM3A-214ENST00000442929 KRTAP4-8A0A0G2JLE6 195 aa7.43□□□□□ -1.22
FAM3A-214ENST00000442929 KRTAP4-8Q9BYQ9 185 aa7.43□□□□□ -1.22
FAM3A-214ENST00000442929 KRTAP2-2Q9BYT5 123 aa7.38□□□□□ -1.23
FAM3A-214ENST00000442929 KRTAP2-1Q9BYU5 128 aa7.38□□□□□ -1.23
FAM3A-214ENST00000442929 TNP1P09430 55 aa7.37□□□□□ -1.23
FAM3A-214ENST00000442929 C10orf95Q9H7T3 257 aa7.33□□□□□ -1.24
FAM3A-214ENST00000442929 GPR98Q8WXG9 6306 aa7.28□□□□□ -1.24
FAM3A-214ENST00000442929 SPRR2EP22531 72 aa7.27□□□□□ -1.25
FAM3A-214ENST00000442929 SPRR2BP35325 72 aa7.27□□□□□ -1.25
FAM3A-214ENST00000442929 SPRR2AP35326 72 aa7.27□□□□□ -1.25
FAM3A-214ENST00000442929 CDC42SE1Q9NRR8 79 aa7.22□□□□□ -1.25
FAM3A-214ENST00000442929 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
FAM3A-214ENST00000442929 LCE1AQ5T7P2 110 aa7.15□□□□□ -1.26
FAM3A-214ENST00000442929 KRTAP19-7Q3SYF9 63 aa7.09□□□□□ -1.27
FAM3A-214ENST00000442929 LCE3AQ5TA76 89 aa7.09□□□□□ -1.27
FAM3A-214ENST00000442929 MT1EP04732 61 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms