RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
LINC00642-202ENST00000442515 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
LINC00642-202ENST00000442515 SPRR2EP22531 72 aa6.27□□□□□ -1.41
LINC00642-202ENST00000442515 SPRR2BP35325 72 aa6.27□□□□□ -1.41
LINC00642-202ENST00000442515 SPRR2AP35326 72 aa6.27□□□□□ -1.41
LINC00642-202ENST00000442515 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
LINC00642-202ENST00000442515 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
LINC00642-202ENST00000442515 KRTAP2-2Q9BYT5 123 aa6.27□□□□□ -1.41
LINC00642-202ENST00000442515 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
LINC00642-202ENST00000442515 GPR98Q8WXG9 6306 aa6.26□□□□□ -1.41
LINC00642-202ENST00000442515 TRAV7A0A075B6U4 112 aa6.26□□□□□ -1.41
LINC00642-202ENST00000442515 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
LINC00642-202ENST00000442515 TMEM254Q8TBM7 123 aa6.25□□□□□ -1.41
LINC00642-202ENST00000442515 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
LINC00642-202ENST00000442515 UQCRQO14949 82 aa6.23□□□□□ -1.41
LINC00642-202ENST00000442515 COX7CP15954 63 aa6.23□□□□□ -1.41
LINC00642-202ENST00000442515 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
LINC00642-202ENST00000442515 MRPL34Q9BQ48 92 aaKnown RBP6.22□□□□□ -1.41
LINC00642-202ENST00000442515 SPRR2GQ9BYE4 73 aa6.21□□□□□ -1.42
LINC00642-202ENST00000442515 TP53AIP1Q9HCN2 124 aa6.19□□□□□ -1.42
LINC00642-202ENST00000442515 C5orf47Q569G3 176 aa6.16□□□□□ -1.42
LINC00642-202ENST00000442515 CCDC179H3BU77 68 aa6.15□□□□□ -1.42
LINC00642-202ENST00000442515 NDUFS5O43920 106 aa6.13□□□□□ -1.43
LINC00642-202ENST00000442515 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
LINC00642-202ENST00000442515 H3BPC8 53 aa6.12□□□□□ -1.43
LINC00642-202ENST00000442515 MP68P56378 58 aa6.12□□□□□ -1.43
LINC00642-202ENST00000442515 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
LINC00642-202ENST00000442515 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
LINC00642-202ENST00000442515 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
LINC00642-202ENST00000442515 H0Y9P7 68 aa6.09□□□□□ -1.43
LINC00642-202ENST00000442515 NDUFC1O43677 76 aa6.07□□□□□ -1.44
LINC00642-202ENST00000442515 SPRR2DP22532 72 aa6.07□□□□□ -1.44
LINC00642-202ENST00000442515 LINC00208Q96KT6 92 aa6.04□□□□□ -1.44
LINC00642-202ENST00000442515 SNURFQ9Y675 71 aa6.04□□□□□ -1.44
LINC00642-202ENST00000442515 C1orf64Q8NEQ6 169 aa6.03□□□□□ -1.44
LINC00642-202ENST00000442515 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
LINC00642-202ENST00000442515 LOC101927531A0A1B0GV80 90 aa6.02□□□□□ -1.45
LINC00642-202ENST00000442515 IGKV2-30P06310 120 aa6.02□□□□□ -1.45
LINC00642-202ENST00000442515 Q5W150 140 aa6.02□□□□□ -1.45
LINC00642-202ENST00000442515 CYSTM1Q9H1C7 97 aa6.02□□□□□ -1.45
LINC00642-202ENST00000442515 H7BZZ5 65 aa6.01□□□□□ -1.45
LINC00642-202ENST00000442515 TMEM258P61165 79 aa6□□□□□ -1.45
LINC00642-202ENST00000442515 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
LINC00642-202ENST00000442515 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
LINC00642-202ENST00000442515 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
LINC00642-202ENST00000442515 ATP5EP56381 51 aaPredicted RBP5.95□□□□□ -1.46
LINC00642-202ENST00000442515 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
LINC00642-202ENST00000442515 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
LINC00642-202ENST00000442515 S4R3F8 94 aa5.95□□□□□ -1.46
LINC00642-202ENST00000442515 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
LINC00642-202ENST00000442515 CYP4F30PQ9H0H9 118 aa5.94□□□□□ -1.46
LINC00642-202ENST00000442515 SPANXA2-OT1Q8N9U9 137 aa5.93□□□□□ -1.46
LINC00642-202ENST00000442515 LCA10Q71F78 164 aa5.91□□□□□ -1.46
LINC00642-202ENST00000442515 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
LINC00642-202ENST00000442515 KRTAP3-1Q9BYR8 98 aa5.88□□□□□ -1.47
LINC00642-202ENST00000442515 MT1XP80297 61 aa5.86□□□□□ -1.47
LINC00642-202ENST00000442515 CRIPTQ9P021 101 aa5.86□□□□□ -1.47
LINC00642-202ENST00000442515 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
LINC00642-202ENST00000442515 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
LINC00642-202ENST00000442515 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
LINC00642-202ENST00000442515 SERP1Q9Y6X1 66 aa5.8□□□□□ -1.48
LINC00642-202ENST00000442515 RPS28P62857 69 aaKnown RBP5.79□□□□□ -1.48
LINC00642-202ENST00000442515 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
LINC00642-202ENST00000442515 A8MUN3 132 aa5.76□□□□□ -1.49
LINC00642-202ENST00000442515 ACYP2P14621 99 aa5.73□□□□□ -1.49
LINC00642-202ENST00000442515 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
LINC00642-202ENST00000442515 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
LINC00642-202ENST00000442515 COA5Q86WW8 74 aa5.7□□□□□ -1.5
LINC00642-202ENST00000442515 SMIM26A0A096LP01 95 aa5.64□□□□□ -1.51
LINC00642-202ENST00000442515 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
LINC00642-202ENST00000442515 CHKB-CPT1BH3BT56 60 aa5.63□□□□□ -1.51
LINC00642-202ENST00000442515 AHNAK2Q8IVF2 5795 aa5.59□□□□□ -1.51
LINC00642-202ENST00000442515 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
LINC00642-202ENST00000442515 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
LINC00642-202ENST00000442515 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
LINC00642-202ENST00000442515 H0YAA0 97 aa5.57□□□□□ -1.52
LINC00642-202ENST00000442515 V9GYY9 64 aa5.56□□□□□ -1.52
LINC00642-202ENST00000442515 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
LINC00642-202ENST00000442515 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
LINC00642-202ENST00000442515 Q1T7F1 81 aa5.54□□□□□ -1.52
LINC00642-202ENST00000442515 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
LINC00642-202ENST00000442515 ADM2Q7Z4H4 148 aa5.52□□□□□ -1.53
LINC00642-202ENST00000442515 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
LINC00642-202ENST00000442515 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
LINC00642-202ENST00000442515 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
LINC00642-202ENST00000442515 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
LINC00642-202ENST00000442515 R4GN34 69 aa5.42□□□□□ -1.54
LINC00642-202ENST00000442515 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
LINC00642-202ENST00000442515 A0A1B0GU69 56 aa5.4□□□□□ -1.54
LINC00642-202ENST00000442515 SEC61GP60059 68 aa5.39□□□□□ -1.55
LINC00642-202ENST00000442515 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
LINC00642-202ENST00000442515 PSPHP1O15172 72 aa5.38□□□□□ -1.55
LINC00642-202ENST00000442515 M0QZ58 72 aa5.36□□□□□ -1.55
LINC00642-202ENST00000442515 MT4P47944 62 aa5.36□□□□□ -1.55
LINC00642-202ENST00000442515 P0C880 135 aa5.32□□□□□ -1.56
LINC00642-202ENST00000442515 LINC01554Q52M75 96 aa5.32□□□□□ -1.56
LINC00642-202ENST00000442515 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
LINC00642-202ENST00000442515 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
LINC00642-202ENST00000442515 KRTAP5-7Q6L8G8 165 aa5.27□□□□□ -1.57
LINC00642-202ENST00000442515 A6NED7 52 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms