RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
CPSF4-205ENST00000440514 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
CPSF4-205ENST00000440514 LCA10Q71F78 164 aa8.49□□□□□ -1.05
CPSF4-205ENST00000440514 USH2AO75445 5202 aa8.47□□□□□ -1.05
CPSF4-205ENST00000440514 LCE2BO14633 110 aa8.47□□□□□ -1.05
CPSF4-205ENST00000440514 KLKP1Q107X0 134 aa8.44□□□□□ -1.06
CPSF4-205ENST00000440514 NDUFC1O43677 76 aa8.39□□□□□ -1.07
CPSF4-205ENST00000440514 SERP2Q8N6R1 65 aa8.35□□□□□ -1.07
CPSF4-205ENST00000440514 SSPOA2VEC9 5147 aa8.34□□□□□ -1.07
CPSF4-205ENST00000440514 DMAC1Q96GE9 116 aa8.31□□□□□ -1.08
CPSF4-205ENST00000440514 ACYP2P14621 99 aa8.26□□□□□ -1.09
CPSF4-205ENST00000440514 H0YAA0 97 aa8.23□□□□□ -1.09
CPSF4-205ENST00000440514 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
CPSF4-205ENST00000440514 C20orf197Q8N268 126 aa8.22□□□□□ -1.09
CPSF4-205ENST00000440514 SPANXA2-OT1Q8N9U9 137 aa8.2□□□□□ -1.1
CPSF4-205ENST00000440514 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
CPSF4-205ENST00000440514 SNURFQ9Y675 71 aa8.2□□□□□ -1.1
CPSF4-205ENST00000440514 SPTSSBQ8NFR3 76 aa8.19□□□□□ -1.1
CPSF4-205ENST00000440514 COX7CP15954 63 aa8.17□□□□□ -1.1
CPSF4-205ENST00000440514 FCGBPQ9Y6R7 5405 aaPredicted RBP8.12□□□□□ -1.11
CPSF4-205ENST00000440514 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
CPSF4-205ENST00000440514 KRTAP19-6Q3LI70 58 aa8.11□□□□□ -1.11
CPSF4-205ENST00000440514 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
CPSF4-205ENST00000440514 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
CPSF4-205ENST00000440514 ANAPC13Q9BS18 74 aa8.05□□□□□ -1.12
CPSF4-205ENST00000440514 MT1BP07438 61 aa8.04□□□□□ -1.12
CPSF4-205ENST00000440514 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
CPSF4-205ENST00000440514 Q5VV11 94 aa8.02□□□□□ -1.13
CPSF4-205ENST00000440514 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.01□□□□□ -1.13
CPSF4-205ENST00000440514 H7BZZ5 65 aa7.92□□□□□ -1.14
CPSF4-205ENST00000440514 P0C880 135 aa7.92□□□□□ -1.14
CPSF4-205ENST00000440514 R4GN34 69 aa7.91□□□□□ -1.14
CPSF4-205ENST00000440514 MACF1Q9UPN3 7388 aaKnown RBP7.87□□□□□ -1.15
CPSF4-205ENST00000440514 COA5Q86WW8 74 aa7.85□□□□□ -1.15
CPSF4-205ENST00000440514 A6NN06 94 aa7.83□□□□□ -1.16
CPSF4-205ENST00000440514 KRTAP9-7A8MTY7 169 aa7.83□□□□□ -1.16
CPSF4-205ENST00000440514 ATP5EP56381 51 aaPredicted RBP7.8□□□□□ -1.16
CPSF4-205ENST00000440514 M0QZ58 72 aa7.79□□□□□ -1.16
CPSF4-205ENST00000440514 SEC61GP60059 68 aa7.79□□□□□ -1.16
CPSF4-205ENST00000440514 CYSTM1Q9H1C7 97 aa7.79□□□□□ -1.16
CPSF4-205ENST00000440514 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
CPSF4-205ENST00000440514 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
CPSF4-205ENST00000440514 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
CPSF4-205ENST00000440514 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
CPSF4-205ENST00000440514 SERP1Q9Y6X1 66 aa7.73□□□□□ -1.17
CPSF4-205ENST00000440514 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
CPSF4-205ENST00000440514 TMEM258P61165 79 aa7.65□□□□□ -1.18
CPSF4-205ENST00000440514 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
CPSF4-205ENST00000440514 MT1XP80297 61 aa7.59□□□□□ -1.19
CPSF4-205ENST00000440514 A0A1B0GU69 56 aa7.54□□□□□ -1.2
CPSF4-205ENST00000440514 KRTAP6-3Q3LI67 103 aa7.54□□□□□ -1.2
CPSF4-205ENST00000440514 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
CPSF4-205ENST00000440514 PRR15LQ9BU68 103 aa7.51□□□□□ -1.21
CPSF4-205ENST00000440514 A0A1B0GU33 70 aa7.5□□□□□ -1.21
CPSF4-205ENST00000440514 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
CPSF4-205ENST00000440514 LINC01558Q9Y6Z2 57 aa7.37□□□□□ -1.23
CPSF4-205ENST00000440514 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
CPSF4-205ENST00000440514 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
CPSF4-205ENST00000440514 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
CPSF4-205ENST00000440514 KMT2DO14686 5537 aa7.31□□□□□ -1.24
CPSF4-205ENST00000440514 A0A0D9SG42 100 aa7.3□□□□□ -1.24
CPSF4-205ENST00000440514 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
CPSF4-205ENST00000440514 NEBP20929 6669 aa7.3□□□□□ -1.24
CPSF4-205ENST00000440514 V9GYY9 64 aa7.29□□□□□ -1.24
CPSF4-205ENST00000440514 MUC12Q9UKN1 5478 aa7.26□□□□□ -1.25
CPSF4-205ENST00000440514 KRTAP10-7P60409 375 aaPredicted RBP7.25□□□□□ -1.25
CPSF4-205ENST00000440514 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
CPSF4-205ENST00000440514 PCP4P48539 62 aa7.22□□□□□ -1.25
CPSF4-205ENST00000440514 UQCR11O14957 56 aa7.21□□□□□ -1.26
CPSF4-205ENST00000440514 KRTAP8-1Q8IUC2 63 aa7.2□□□□□ -1.26
CPSF4-205ENST00000440514 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
CPSF4-205ENST00000440514 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
CPSF4-205ENST00000440514 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
CPSF4-205ENST00000440514 SPRR2FQ96RM1 72 aa7.16□□□□□ -1.26
CPSF4-205ENST00000440514 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
CPSF4-205ENST00000440514 Q1T7F1 81 aa7.13□□□□□ -1.27
CPSF4-205ENST00000440514 A8MU10 97 aa7.11□□□□□ -1.27
CPSF4-205ENST00000440514 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
CPSF4-205ENST00000440514 MDN1Q9NU22 5596 aa7.09□□□□□ -1.27
CPSF4-205ENST00000440514 MIR22HGQ0VDD5 57 aa7.02□□□□□ -1.29
CPSF4-205ENST00000440514 SPRR2EP22531 72 aa7.01□□□□□ -1.29
CPSF4-205ENST00000440514 SPRR2BP35325 72 aa7.01□□□□□ -1.29
CPSF4-205ENST00000440514 SPRR2AP35326 72 aa7.01□□□□□ -1.29
CPSF4-205ENST00000440514 K7ERS5 55 aa6.99□□□□□ -1.29
CPSF4-205ENST00000440514 PSPHP1O15172 72 aa6.98□□□□□ -1.29
CPSF4-205ENST00000440514 LCE1AQ5T7P2 110 aa6.94□□□□□ -1.3
CPSF4-205ENST00000440514 KRTAP20-1Q3LI63 56 aa6.89□□□□□ -1.31
CPSF4-205ENST00000440514 A6NED7 52 aa6.86□□□□□ -1.31
CPSF4-205ENST00000440514 TNP1P09430 55 aa6.86□□□□□ -1.31
CPSF4-205ENST00000440514 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
CPSF4-205ENST00000440514 SPRR2DP22532 72 aa6.77□□□□□ -1.33
CPSF4-205ENST00000440514 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
CPSF4-205ENST00000440514 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
CPSF4-205ENST00000440514 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
CPSF4-205ENST00000440514 MT1EP04732 61 aa6.71□□□□□ -1.34
CPSF4-205ENST00000440514 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
CPSF4-205ENST00000440514 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
CPSF4-205ENST00000440514 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
CPSF4-205ENST00000440514 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.34
CPSF4-205ENST00000440514 LCE3AQ5TA76 89 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 743.4 ms