RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 MUC2Q02817 5179 aa9.8□□□□□ -0.84
APTR-204ENST00000440088 LCA10Q71F78 164 aa9.78□□□□□ -0.84
APTR-204ENST00000440088 LINC01558Q9Y6Z2 57 aa9.78□□□□□ -0.84
APTR-204ENST00000440088 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
APTR-204ENST00000440088 PSPHP1O15172 72 aa9.72□□□□□ -0.85
APTR-204ENST00000440088 PRR15LQ9BU68 103 aa9.7□□□□□ -0.86
APTR-204ENST00000440088 KRTAP19-2Q3LHN2 52 aa9.7□□□□□ -0.86
APTR-204ENST00000440088 UBR4Q5T4S7 5183 aa9.69□□□□□ -0.86
APTR-204ENST00000440088 A0A1B0GU69 56 aa9.65□□□□□ -0.87
APTR-204ENST00000440088 Q5VV11 94 aa9.61□□□□□ -0.87
APTR-204ENST00000440088 SEC61GP60059 68 aa9.6□□□□□ -0.87
APTR-204ENST00000440088 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
APTR-204ENST00000440088 RNF213Q63HN8 5207 aa9.58□□□□□ -0.88
APTR-204ENST00000440088 FLGP20930 4061 aaPredicted RBP9.5□□□□□ -0.89
APTR-204ENST00000440088 LCE2CQ5TA81 110 aa9.47□□□□□ -0.89
APTR-204ENST00000440088 A6NED7 52 aa9.43□□□□□ -0.9
APTR-204ENST00000440088 H0YAA0 97 aa9.38□□□□□ -0.91
APTR-204ENST00000440088 KRTAP10-6P60371 365 aaPredicted RBP9.38□□□□□ -0.91
APTR-204ENST00000440088 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
APTR-204ENST00000440088 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
APTR-204ENST00000440088 FAT4Q6V0I7 4981 aa9.38□□□□□ -0.91
APTR-204ENST00000440088 UQCR11O14957 56 aa9.36□□□□□ -0.91
APTR-204ENST00000440088 A0A1B0GU33 70 aa9.34□□□□□ -0.91
APTR-204ENST00000440088 BRK1Q8WUW1 75 aa9.33□□□□□ -0.92
APTR-204ENST00000440088 P0C880 135 aa9.32□□□□□ -0.92
APTR-204ENST00000440088 MT1HP80294 61 aa9.29□□□□□ -0.92
APTR-204ENST00000440088 CDC42SE1Q9NRR8 79 aa9.25□□□□□ -0.93
APTR-204ENST00000440088 M0R2T5 61 aa9.24□□□□□ -0.93
APTR-204ENST00000440088 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
APTR-204ENST00000440088 SPATA8Q6RVD6 105 aa9.22□□□□□ -0.93
APTR-204ENST00000440088 A8MU10 97 aa9.19□□□□□ -0.94
APTR-204ENST00000440088 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
APTR-204ENST00000440088 PRO0628Q9UI54 55 aa9.12□□□□□ -0.95
APTR-204ENST00000440088 M0QZ58 72 aa9.1□□□□□ -0.95
APTR-204ENST00000440088 R4GN34 69 aa9.07□□□□□ -0.96
APTR-204ENST00000440088 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
APTR-204ENST00000440088 A0A0D9SG42 100 aa8.98□□□□□ -0.97
APTR-204ENST00000440088 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
APTR-204ENST00000440088 KRTAP9-8Q9BYQ0 159 aa8.95□□□□□ -0.98
APTR-204ENST00000440088 MT2AP02795 61 aa8.92□□□□□ -0.98
APTR-204ENST00000440088 LCE2AQ5TA79 106 aaPredicted RBP8.91□□□□□ -0.98
APTR-204ENST00000440088 LINC01554Q52M75 96 aa8.89□□□□□ -0.99
APTR-204ENST00000440088 KRTAP10-10P60014 251 aa8.88□□□□□ -0.99
APTR-204ENST00000440088 MT1FP04733 61 aa8.87□□□□□ -0.99
APTR-204ENST00000440088 K7ERS5 55 aa8.85□□□□□ -0.99
APTR-204ENST00000440088 PMAIP1Q13794 54 aa8.83□□□□□ -1
APTR-204ENST00000440088 KRTAP12-1P59990 96 aa8.78□□□□□ -1
APTR-204ENST00000440088 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
APTR-204ENST00000440088 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
APTR-204ENST00000440088 KRTAP12-2P59991 146 aa8.76□□□□□ -1.01
APTR-204ENST00000440088 A6NN06 94 aa8.75□□□□□ -1.01
APTR-204ENST00000440088 KRTAP19-1Q8IUB9 90 aa8.73□□□□□ -1.01
APTR-204ENST00000440088 KRTAP9-3Q9BYQ3 159 aa8.63□□□□□ -1.03
APTR-204ENST00000440088 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
APTR-204ENST00000440088 KRTAP19-8Q3LI54 63 aa8.52□□□□□ -1.05
APTR-204ENST00000440088 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
APTR-204ENST00000440088 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
APTR-204ENST00000440088 ROMO1P60602 79 aa8.46□□□□□ -1.05
APTR-204ENST00000440088 KTN1-AS1Q86SY8 53 aa8.45□□□□□ -1.06
APTR-204ENST00000440088 MT1BP07438 61 aa8.4□□□□□ -1.06
APTR-204ENST00000440088 LCE2BO14633 110 aa8.37□□□□□ -1.07
APTR-204ENST00000440088 SVIPQ8NHG7 77 aa8.32□□□□□ -1.08
APTR-204ENST00000440088 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
APTR-204ENST00000440088 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
APTR-204ENST00000440088 USH2AO75445 5202 aa8.14□□□□□ -1.11
APTR-204ENST00000440088 MT1XP80297 61 aa8.14□□□□□ -1.11
APTR-204ENST00000440088 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
APTR-204ENST00000440088 KRTAP25-1Q3LHN0 102 aa8.11□□□□□ -1.11
APTR-204ENST00000440088 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
APTR-204ENST00000440088 TNP1P09430 55 aa8.08□□□□□ -1.12
APTR-204ENST00000440088 SSPOA2VEC9 5147 aa7.87□□□□□ -1.15
APTR-204ENST00000440088 KRTAP19-6Q3LI70 58 aa7.86□□□□□ -1.15
APTR-204ENST00000440088 FSIP2Q5CZC0 6907 aa7.86□□□□□ -1.15
APTR-204ENST00000440088 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
APTR-204ENST00000440088 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
APTR-204ENST00000440088 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
APTR-204ENST00000440088 KRTAP9-2Q9BYQ4 174 aa7.76□□□□□ -1.17
APTR-204ENST00000440088 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
APTR-204ENST00000440088 LCE3AQ5TA76 89 aa7.71□□□□□ -1.17
APTR-204ENST00000440088 FCGBPQ9Y6R7 5405 aaPredicted RBP7.56□□□□□ -1.2
APTR-204ENST00000440088 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
APTR-204ENST00000440088 KMT2DO14686 5537 aa7.52□□□□□ -1.21
APTR-204ENST00000440088 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
APTR-204ENST00000440088 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
APTR-204ENST00000440088 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
APTR-204ENST00000440088 KRTAP12-3P60328 96 aa7.41□□□□□ -1.22
APTR-204ENST00000440088 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
APTR-204ENST00000440088 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
APTR-204ENST00000440088 KRTAP19-7Q3SYF9 63 aa7.26□□□□□ -1.25
APTR-204ENST00000440088 MACF1Q9UPN3 7388 aaKnown RBP7.18□□□□□ -1.26
APTR-204ENST00000440088 KRTAP9-6A0A140TA67 174 aa7.13□□□□□ -1.27
APTR-204ENST00000440088 MT1EP04732 61 aa7.13□□□□□ -1.27
APTR-204ENST00000440088 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
APTR-204ENST00000440088 MT1LQ93083 61 aa7□□□□□ -1.29
APTR-204ENST00000440088 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
APTR-204ENST00000440088 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
APTR-204ENST00000440088 MUC12Q9UKN1 5478 aa6.94□□□□□ -1.3
APTR-204ENST00000440088 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
APTR-204ENST00000440088 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
APTR-204ENST00000440088 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms