RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 COA5Q86WW8 74 aa5.76□□□□□ -1.49
HMGCL-204ENST00000436439 V9GYY9 64 aa5.75□□□□□ -1.49
HMGCL-204ENST00000436439 MPLKIPQ8TAP9 179 aa5.74□□□□□ -1.49
HMGCL-204ENST00000436439 HRES1P13985 223 aa5.73□□□□□ -1.49
HMGCL-204ENST00000436439 LORP23490 312 aaPredicted RBP5.72□□□□□ -1.49
HMGCL-204ENST00000436439 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.5
HMGCL-204ENST00000436439 ACYP2P14621 99 aa5.7□□□□□ -1.5
HMGCL-204ENST00000436439 DMAC1Q96GE9 116 aa5.7□□□□□ -1.5
HMGCL-204ENST00000436439 FLGP20930 4061 aaPredicted RBP5.7□□□□□ -1.5
HMGCL-204ENST00000436439 IGKV2D-30A0A075B6S6 120 aa5.69□□□□□ -1.5
HMGCL-204ENST00000436439 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
HMGCL-204ENST00000436439 SPINK7P58062 85 aa5.65□□□□□ -1.51
HMGCL-204ENST00000436439 M0R2T5 61 aa5.64□□□□□ -1.51
HMGCL-204ENST00000436439 COX6B2Q6YFQ2 88 aa5.63□□□□□ -1.51
HMGCL-204ENST00000436439 CHKB-CPT1BH3BT56 60 aa5.62□□□□□ -1.51
HMGCL-204ENST00000436439 A8MUN3 132 aa5.61□□□□□ -1.51
HMGCL-204ENST00000436439 LINC01558Q9Y6Z2 57 aa5.61□□□□□ -1.51
HMGCL-204ENST00000436439 PSPHP1O15172 72 aa5.59□□□□□ -1.51
HMGCL-204ENST00000436439 Q5VV11 94 aa5.57□□□□□ -1.52
HMGCL-204ENST00000436439 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
HMGCL-204ENST00000436439 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
HMGCL-204ENST00000436439 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
HMGCL-204ENST00000436439 SPTSSBQ8NFR3 76 aa5.5□□□□□ -1.53
HMGCL-204ENST00000436439 RBM12B-AS1Q9P1G2 102 aa5.49□□□□□ -1.53
HMGCL-204ENST00000436439 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
HMGCL-204ENST00000436439 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.54
HMGCL-204ENST00000436439 USH2AO75445 5202 aa5.45□□□□□ -1.54
HMGCL-204ENST00000436439 A0A1B0GU69 56 aa5.44□□□□□ -1.54
HMGCL-204ENST00000436439 A6NED7 52 aa5.44□□□□□ -1.54
HMGCL-204ENST00000436439 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
HMGCL-204ENST00000436439 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
HMGCL-204ENST00000436439 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
HMGCL-204ENST00000436439 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
HMGCL-204ENST00000436439 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
HMGCL-204ENST00000436439 MT2AP02795 61 aa5.38□□□□□ -1.55
HMGCL-204ENST00000436439 SEC61GP60059 68 aa5.38□□□□□ -1.55
HMGCL-204ENST00000436439 LCA10Q71F78 164 aa5.37□□□□□ -1.55
HMGCL-204ENST00000436439 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
HMGCL-204ENST00000436439 MT1FP04733 61 aa5.34□□□□□ -1.55
HMGCL-204ENST00000436439 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
HMGCL-204ENST00000436439 S4R3F8 94 aa5.33□□□□□ -1.56
HMGCL-204ENST00000436439 UQCR11O14957 56 aa5.32□□□□□ -1.56
HMGCL-204ENST00000436439 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
HMGCL-204ENST00000436439 A8MU10 97 aa5.31□□□□□ -1.56
HMGCL-204ENST00000436439 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
HMGCL-204ENST00000436439 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
HMGCL-204ENST00000436439 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
HMGCL-204ENST00000436439 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
HMGCL-204ENST00000436439 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
HMGCL-204ENST00000436439 PMAIP1Q13794 54 aa5.24□□□□□ -1.57
HMGCL-204ENST00000436439 CSAG1Q6PB30 78 aa5.23□□□□□ -1.57
HMGCL-204ENST00000436439 A0A1B0GU33 70 aa5.22□□□□□ -1.57
HMGCL-204ENST00000436439 A6NN06 94 aa5.19□□□□□ -1.58
HMGCL-204ENST00000436439 H0YAA0 97 aa5.16□□□□□ -1.58
HMGCL-204ENST00000436439 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
HMGCL-204ENST00000436439 MACF1Q9UPN3 7388 aaKnown RBP5.14□□□□□ -1.59
HMGCL-204ENST00000436439 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
HMGCL-204ENST00000436439 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
HMGCL-204ENST00000436439 ADM2Q7Z4H4 148 aa5.06□□□□□ -1.6
HMGCL-204ENST00000436439 P0C880 135 aa5.04□□□□□ -1.6
HMGCL-204ENST00000436439 K7ERS5 55 aa5.04□□□□□ -1.6
HMGCL-204ENST00000436439 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
HMGCL-204ENST00000436439 M0QZ58 72 aa4.99□□□□□ -1.61
HMGCL-204ENST00000436439 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
HMGCL-204ENST00000436439 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
HMGCL-204ENST00000436439 A0A0D9SG42 100 aa4.93□□□□□ -1.62
HMGCL-204ENST00000436439 R4GN34 69 aa4.91□□□□□ -1.62
HMGCL-204ENST00000436439 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
HMGCL-204ENST00000436439 MT1BP07438 61 aa4.87□□□□□ -1.63
HMGCL-204ENST00000436439 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
HMGCL-204ENST00000436439 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
HMGCL-204ENST00000436439 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
HMGCL-204ENST00000436439 ROMO1P60602 79 aa4.84□□□□□ -1.63
HMGCL-204ENST00000436439 KRTAP12-2P59991 146 aa4.83□□□□□ -1.64
HMGCL-204ENST00000436439 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
HMGCL-204ENST00000436439 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
HMGCL-204ENST00000436439 SPINT4Q6UDR6 99 aa4.81□□□□□ -1.64
HMGCL-204ENST00000436439 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
HMGCL-204ENST00000436439 NEBP20929 6669 aa4.76□□□□□ -1.65
HMGCL-204ENST00000436439 LINC01554Q52M75 96 aa4.76□□□□□ -1.65
HMGCL-204ENST00000436439 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
HMGCL-204ENST00000436439 KRTAP5-9P26371 169 aa4.7□□□□□ -1.66
HMGCL-204ENST00000436439 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
HMGCL-204ENST00000436439 H3BS24 57 aa4.67□□□□□ -1.66
HMGCL-204ENST00000436439 KMT2DO14686 5537 aa4.65□□□□□ -1.66
HMGCL-204ENST00000436439 MDN1Q9NU22 5596 aa4.65□□□□□ -1.66
HMGCL-204ENST00000436439 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
HMGCL-204ENST00000436439 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
HMGCL-204ENST00000436439 CAMK2N1Q7Z7J9 78 aa4.59□□□□□ -1.67
HMGCL-204ENST00000436439 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
HMGCL-204ENST00000436439 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
HMGCL-204ENST00000436439 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.69
HMGCL-204ENST00000436439 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.69
HMGCL-204ENST00000436439 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
HMGCL-204ENST00000436439 MT1XP80297 61 aa4.52□□□□□ -1.69
HMGCL-204ENST00000436439 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
HMGCL-204ENST00000436439 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
HMGCL-204ENST00000436439 SPRR2EP22531 72 aa4.5□□□□□ -1.69
HMGCL-204ENST00000436439 SPRR2BP35325 72 aa4.5□□□□□ -1.69
HMGCL-204ENST00000436439 SPRR2AP35326 72 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms