RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 SPANXA2-OT1Q8N9U9 137 aa4.49□□□□□ -1.69
SMC6-204ENST00000428868 COX6B2Q6YFQ2 88 aa4.48□□□□□ -1.69
SMC6-204ENST00000428868 DMAC1Q96GE9 116 aa4.47□□□□□ -1.69
SMC6-204ENST00000428868 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
SMC6-204ENST00000428868 ATP5EP56381 51 aaPredicted RBP4.43□□□□□ -1.7
SMC6-204ENST00000428868 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
SMC6-204ENST00000428868 RBM12B-AS1Q9P1G2 102 aa4.42□□□□□ -1.7
SMC6-204ENST00000428868 COA5Q86WW8 74 aa4.41□□□□□ -1.7
SMC6-204ENST00000428868 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
SMC6-204ENST00000428868 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
SMC6-204ENST00000428868 LCE2CQ5TA81 110 aa4.4□□□□□ -1.71
SMC6-204ENST00000428868 A8MUN3 132 aa4.39□□□□□ -1.71
SMC6-204ENST00000428868 ACYP2P14621 99 aa4.39□□□□□ -1.71
SMC6-204ENST00000428868 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
SMC6-204ENST00000428868 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
SMC6-204ENST00000428868 LCA10Q71F78 164 aa4.36□□□□□ -1.71
SMC6-204ENST00000428868 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
SMC6-204ENST00000428868 S4R3F8 94 aa4.35□□□□□ -1.71
SMC6-204ENST00000428868 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
SMC6-204ENST00000428868 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
SMC6-204ENST00000428868 CHKB-CPT1BH3BT56 60 aa4.32□□□□□ -1.72
SMC6-204ENST00000428868 MT1HP80294 61 aa4.3□□□□□ -1.72
SMC6-204ENST00000428868 RPS28P62857 69 aaKnown RBP4.28□□□□□ -1.72
SMC6-204ENST00000428868 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
SMC6-204ENST00000428868 LORP23490 312 aaPredicted RBP4.26□□□□□ -1.73
SMC6-204ENST00000428868 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
SMC6-204ENST00000428868 SMIM26A0A096LP01 95 aa4.22□□□□□ -1.73
SMC6-204ENST00000428868 CSAG1Q6PB30 78 aa4.22□□□□□ -1.73
SMC6-204ENST00000428868 SPTSSBQ8NFR3 76 aa4.2□□□□□ -1.74
SMC6-204ENST00000428868 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
SMC6-204ENST00000428868 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
SMC6-204ENST00000428868 M0R2T5 61 aa4.18□□□□□ -1.74
SMC6-204ENST00000428868 Q1T7F1 81 aa4.17□□□□□ -1.74
SMC6-204ENST00000428868 P0C880 135 aa4.16□□□□□ -1.74
SMC6-204ENST00000428868 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
SMC6-204ENST00000428868 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
SMC6-204ENST00000428868 PRR15LQ9BU68 103 aa4.15□□□□□ -1.75
SMC6-204ENST00000428868 PSPHP1O15172 72 aa4.14□□□□□ -1.75
SMC6-204ENST00000428868 KRTAP9-8Q9BYQ0 159 aa4.13□□□□□ -1.75
SMC6-204ENST00000428868 A0A1B0GU69 56 aa4.12□□□□□ -1.75
SMC6-204ENST00000428868 H0YAA0 97 aa4.12□□□□□ -1.75
SMC6-204ENST00000428868 MT2AP02795 61 aa4.12□□□□□ -1.75
SMC6-204ENST00000428868 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
SMC6-204ENST00000428868 Q5VV11 94 aa4.12□□□□□ -1.75
SMC6-204ENST00000428868 MT1FP04733 61 aa4.11□□□□□ -1.75
SMC6-204ENST00000428868 V9GYY9 64 aa4.1□□□□□ -1.75
SMC6-204ENST00000428868 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
SMC6-204ENST00000428868 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
SMC6-204ENST00000428868 SEC61GP60059 68 aa4.07□□□□□ -1.76
SMC6-204ENST00000428868 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
SMC6-204ENST00000428868 A0A1B0GU33 70 aa4.03□□□□□ -1.76
SMC6-204ENST00000428868 KRTAP10-10P60014 251 aa4.03□□□□□ -1.76
SMC6-204ENST00000428868 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
SMC6-204ENST00000428868 KRTAP19-1Q8IUB9 90 aa4.03□□□□□ -1.76
SMC6-204ENST00000428868 A8MU10 97 aa4□□□□□ -1.77
SMC6-204ENST00000428868 M0QZ58 72 aa4□□□□□ -1.77
SMC6-204ENST00000428868 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
SMC6-204ENST00000428868 A6NED7 52 aa3.98□□□□□ -1.77
SMC6-204ENST00000428868 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
SMC6-204ENST00000428868 R4GN34 69 aa3.97□□□□□ -1.77
SMC6-204ENST00000428868 UQCR11O14957 56 aa3.96□□□□□ -1.78
SMC6-204ENST00000428868 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
SMC6-204ENST00000428868 USH2AO75445 5202 aa3.94□□□□□ -1.78
SMC6-204ENST00000428868 A0A0D9SG42 100 aa3.94□□□□□ -1.78
SMC6-204ENST00000428868 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
SMC6-204ENST00000428868 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
SMC6-204ENST00000428868 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
SMC6-204ENST00000428868 CRIPTQ9P021 101 aa3.94□□□□□ -1.78
SMC6-204ENST00000428868 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
SMC6-204ENST00000428868 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.79
SMC6-204ENST00000428868 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
SMC6-204ENST00000428868 MT1BP07438 61 aa3.87□□□□□ -1.79
SMC6-204ENST00000428868 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
SMC6-204ENST00000428868 KRTAP12-2P59991 146 aa3.87□□□□□ -1.79
SMC6-204ENST00000428868 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
SMC6-204ENST00000428868 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
SMC6-204ENST00000428868 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
SMC6-204ENST00000428868 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
SMC6-204ENST00000428868 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
SMC6-204ENST00000428868 A6NN06 94 aa3.8□□□□□ -1.8
SMC6-204ENST00000428868 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
SMC6-204ENST00000428868 MT1XP80297 61 aa3.72□□□□□ -1.81
SMC6-204ENST00000428868 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
SMC6-204ENST00000428868 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
SMC6-204ENST00000428868 K7ERS5 55 aa3.7□□□□□ -1.82
SMC6-204ENST00000428868 KRTAP10-5P60370 271 aa3.7□□□□□ -1.82
SMC6-204ENST00000428868 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
SMC6-204ENST00000428868 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
SMC6-204ENST00000428868 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.83
SMC6-204ENST00000428868 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
SMC6-204ENST00000428868 NEBP20929 6669 aa3.63□□□□□ -1.83
SMC6-204ENST00000428868 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
SMC6-204ENST00000428868 ROMO1P60602 79 aa3.61□□□□□ -1.83
SMC6-204ENST00000428868 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
SMC6-204ENST00000428868 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
SMC6-204ENST00000428868 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
SMC6-204ENST00000428868 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
SMC6-204ENST00000428868 KMT2DO14686 5537 aa3.51□□□□□ -1.85
SMC6-204ENST00000428868 TNP1P09430 55 aa3.5□□□□□ -1.85
SMC6-204ENST00000428868 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms