RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
HPS4-204ENST00000422379 RNF213Q63HN8 5207 aa4.77□□□□□ -1.65
HPS4-204ENST00000422379 COA5Q86WW8 74 aa4.76□□□□□ -1.65
HPS4-204ENST00000422379 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
HPS4-204ENST00000422379 CHKB-CPT1BH3BT56 60 aa4.75□□□□□ -1.65
HPS4-204ENST00000422379 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
HPS4-204ENST00000422379 Q5VV11 94 aa4.73□□□□□ -1.65
HPS4-204ENST00000422379 ATP11AUNQ6ZP68 121 aa4.71□□□□□ -1.66
HPS4-204ENST00000422379 C7orf65Q6ZTY9 151 aa4.71□□□□□ -1.66
HPS4-204ENST00000422379 DMAC1Q96GE9 116 aa4.71□□□□□ -1.66
HPS4-204ENST00000422379 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
HPS4-204ENST00000422379 A6NED7 52 aa4.69□□□□□ -1.66
HPS4-204ENST00000422379 ACYP2P14621 99 aa4.68□□□□□ -1.66
HPS4-204ENST00000422379 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
HPS4-204ENST00000422379 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
HPS4-204ENST00000422379 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
HPS4-204ENST00000422379 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
HPS4-204ENST00000422379 SPINK7P58062 85 aa4.64□□□□□ -1.67
HPS4-204ENST00000422379 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
HPS4-204ENST00000422379 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
HPS4-204ENST00000422379 CDC42SE1Q9NRR8 79 aa4.62□□□□□ -1.67
HPS4-204ENST00000422379 LCA10Q71F78 164 aa4.6□□□□□ -1.67
HPS4-204ENST00000422379 A8MU10 97 aa4.58□□□□□ -1.68
HPS4-204ENST00000422379 SEC61GP60059 68 aa4.58□□□□□ -1.68
HPS4-204ENST00000422379 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
HPS4-204ENST00000422379 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
HPS4-204ENST00000422379 A0A1B0GU69 56 aa4.54□□□□□ -1.68
HPS4-204ENST00000422379 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
HPS4-204ENST00000422379 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
HPS4-204ENST00000422379 A6NN06 94 aa4.51□□□□□ -1.69
HPS4-204ENST00000422379 RBM12B-AS1Q9P1G2 102 aa4.49□□□□□ -1.69
HPS4-204ENST00000422379 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
HPS4-204ENST00000422379 UQCR11O14957 56 aa4.46□□□□□ -1.7
HPS4-204ENST00000422379 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
HPS4-204ENST00000422379 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
HPS4-204ENST00000422379 H1FX-AS1Q4G0G2 97 aa4.42□□□□□ -1.7
HPS4-204ENST00000422379 S4R3F8 94 aa4.4□□□□□ -1.7
HPS4-204ENST00000422379 MT1HP80294 61 aa4.38□□□□□ -1.71
HPS4-204ENST00000422379 A0A1B0GU33 70 aa4.31□□□□□ -1.72
HPS4-204ENST00000422379 CSAG1Q6PB30 78 aa4.31□□□□□ -1.72
HPS4-204ENST00000422379 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
HPS4-204ENST00000422379 H0YAA0 97 aa4.29□□□□□ -1.72
HPS4-204ENST00000422379 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
HPS4-204ENST00000422379 ADM2Q7Z4H4 148 aa4.26□□□□□ -1.73
HPS4-204ENST00000422379 M0R2T5 61 aa4.24□□□□□ -1.73
HPS4-204ENST00000422379 P0C880 135 aa4.23□□□□□ -1.73
HPS4-204ENST00000422379 K7ERS5 55 aa4.23□□□□□ -1.73
HPS4-204ENST00000422379 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
HPS4-204ENST00000422379 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
HPS4-204ENST00000422379 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
HPS4-204ENST00000422379 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
HPS4-204ENST00000422379 MT2AP02795 61 aa4.18□□□□□ -1.74
HPS4-204ENST00000422379 MT1FP04733 61 aa4.17□□□□□ -1.74
HPS4-204ENST00000422379 A0A0D9SG42 100 aa4.13□□□□□ -1.75
HPS4-204ENST00000422379 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
HPS4-204ENST00000422379 M0QZ58 72 aa4.09□□□□□ -1.75
HPS4-204ENST00000422379 KRTAP10-10P60014 251 aa4.09□□□□□ -1.76
HPS4-204ENST00000422379 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
HPS4-204ENST00000422379 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
HPS4-204ENST00000422379 R4GN34 69 aa4.07□□□□□ -1.76
HPS4-204ENST00000422379 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
HPS4-204ENST00000422379 ROMO1P60602 79 aa4.05□□□□□ -1.76
HPS4-204ENST00000422379 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
HPS4-204ENST00000422379 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
HPS4-204ENST00000422379 USH2AO75445 5202 aa4.04□□□□□ -1.76
HPS4-204ENST00000422379 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
HPS4-204ENST00000422379 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
HPS4-204ENST00000422379 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
HPS4-204ENST00000422379 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
HPS4-204ENST00000422379 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
HPS4-204ENST00000422379 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
HPS4-204ENST00000422379 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
HPS4-204ENST00000422379 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
HPS4-204ENST00000422379 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
HPS4-204ENST00000422379 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
HPS4-204ENST00000422379 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
HPS4-204ENST00000422379 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
HPS4-204ENST00000422379 MT1BP07438 61 aa3.91□□□□□ -1.78
HPS4-204ENST00000422379 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
HPS4-204ENST00000422379 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
HPS4-204ENST00000422379 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
HPS4-204ENST00000422379 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
HPS4-204ENST00000422379 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
HPS4-204ENST00000422379 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
HPS4-204ENST00000422379 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
HPS4-204ENST00000422379 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
HPS4-204ENST00000422379 MT1XP80297 61 aa3.76□□□□□ -1.81
HPS4-204ENST00000422379 KRTAP10-5P60370 271 aa3.75□□□□□ -1.81
HPS4-204ENST00000422379 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
HPS4-204ENST00000422379 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
HPS4-204ENST00000422379 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
HPS4-204ENST00000422379 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
HPS4-204ENST00000422379 KMT2DO14686 5537 aa3.66□□□□□ -1.82
HPS4-204ENST00000422379 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
HPS4-204ENST00000422379 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
HPS4-204ENST00000422379 TNP1P09430 55 aa3.64□□□□□ -1.83
HPS4-204ENST00000422379 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
HPS4-204ENST00000422379 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
HPS4-204ENST00000422379 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
HPS4-204ENST00000422379 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms