RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 CSAG1Q6PB30 78 aa7.9□□□□□ -1.14
NDUFA3-206ENST00000419113 H7BZZ5 65 aa7.86□□□□□ -1.15
NDUFA3-206ENST00000419113 CCDC179H3BU77 68 aa7.85□□□□□ -1.15
NDUFA3-206ENST00000419113 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
NDUFA3-206ENST00000419113 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
NDUFA3-206ENST00000419113 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
NDUFA3-206ENST00000419113 CHKB-CPT1BH3BT56 60 aa7.76□□□□□ -1.17
NDUFA3-206ENST00000419113 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
NDUFA3-206ENST00000419113 MT2AP02795 61 aa7.75□□□□□ -1.17
NDUFA3-206ENST00000419113 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
NDUFA3-206ENST00000419113 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
NDUFA3-206ENST00000419113 H0YAA0 97 aa7.69□□□□□ -1.18
NDUFA3-206ENST00000419113 MT1FP04733 61 aa7.67□□□□□ -1.18
NDUFA3-206ENST00000419113 COA5Q86WW8 74 aa7.67□□□□□ -1.18
NDUFA3-206ENST00000419113 TMEM258P61165 79 aa7.66□□□□□ -1.18
NDUFA3-206ENST00000419113 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
NDUFA3-206ENST00000419113 LCE2DQ5TA82 110 aaPredicted RBP7.64□□□□□ -1.19
NDUFA3-206ENST00000419113 PCP4P48539 62 aa7.57□□□□□ -1.2
NDUFA3-206ENST00000419113 ADM2Q7Z4H4 148 aa7.56□□□□□ -1.2
NDUFA3-206ENST00000419113 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
NDUFA3-206ENST00000419113 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
NDUFA3-206ENST00000419113 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
NDUFA3-206ENST00000419113 P0C880 135 aa7.42□□□□□ -1.22
NDUFA3-206ENST00000419113 SEC61GP60059 68 aa7.42□□□□□ -1.22
NDUFA3-206ENST00000419113 SPRR2GQ9BYE4 73 aa7.42□□□□□ -1.22
NDUFA3-206ENST00000419113 KRTAP9-6A0A140TA67 174 aa7.41□□□□□ -1.22
NDUFA3-206ENST00000419113 SERP1Q9Y6X1 66 aa7.41□□□□□ -1.22
NDUFA3-206ENST00000419113 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
NDUFA3-206ENST00000419113 LCE2BO14633 110 aa7.38□□□□□ -1.23
NDUFA3-206ENST00000419113 R4GN34 69 aa7.37□□□□□ -1.23
NDUFA3-206ENST00000419113 M0QZ58 72 aa7.31□□□□□ -1.24
NDUFA3-206ENST00000419113 A0A1B0GU69 56 aa7.3□□□□□ -1.24
NDUFA3-206ENST00000419113 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
NDUFA3-206ENST00000419113 Q5VV11 94 aa7.27□□□□□ -1.25
NDUFA3-206ENST00000419113 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
NDUFA3-206ENST00000419113 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
NDUFA3-206ENST00000419113 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
NDUFA3-206ENST00000419113 FSIP2Q5CZC0 6907 aa7.25□□□□□ -1.25
NDUFA3-206ENST00000419113 USH2AO75445 5202 aa7.23□□□□□ -1.25
NDUFA3-206ENST00000419113 A0A1B0GU33 70 aa7.2□□□□□ -1.26
NDUFA3-206ENST00000419113 RPS28P62857 69 aaKnown RBP7.2□□□□□ -1.26
NDUFA3-206ENST00000419113 V9GYY9 64 aa7.2□□□□□ -1.26
NDUFA3-206ENST00000419113 MT1BP07438 61 aa7.18□□□□□ -1.26
NDUFA3-206ENST00000419113 SMIM26A0A096LP01 95 aa7.16□□□□□ -1.26
NDUFA3-206ENST00000419113 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
NDUFA3-206ENST00000419113 Q1T7F1 81 aa7.12□□□□□ -1.27
NDUFA3-206ENST00000419113 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
NDUFA3-206ENST00000419113 KRTAP19-6Q3LI70 58 aa7.11□□□□□ -1.27
NDUFA3-206ENST00000419113 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
NDUFA3-206ENST00000419113 A6NN06 94 aa7.09□□□□□ -1.27
NDUFA3-206ENST00000419113 SSPOA2VEC9 5147 aa7.07□□□□□ -1.28
NDUFA3-206ENST00000419113 SPATA8Q6RVD6 105 aa7.05□□□□□ -1.28
NDUFA3-206ENST00000419113 UQCR11O14957 56 aa7.01□□□□□ -1.29
NDUFA3-206ENST00000419113 A0A0D9SG42 100 aa6.97□□□□□ -1.29
NDUFA3-206ENST00000419113 PSPHP1O15172 72 aa6.97□□□□□ -1.29
NDUFA3-206ENST00000419113 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
NDUFA3-206ENST00000419113 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
NDUFA3-206ENST00000419113 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
NDUFA3-206ENST00000419113 A8MU10 97 aa6.87□□□□□ -1.31
NDUFA3-206ENST00000419113 MIR22HGQ0VDD5 57 aa6.87□□□□□ -1.31
NDUFA3-206ENST00000419113 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
NDUFA3-206ENST00000419113 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
NDUFA3-206ENST00000419113 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
NDUFA3-206ENST00000419113 MT1XP80297 61 aa6.85□□□□□ -1.31
NDUFA3-206ENST00000419113 A6NED7 52 aa6.81□□□□□ -1.32
NDUFA3-206ENST00000419113 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
NDUFA3-206ENST00000419113 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
NDUFA3-206ENST00000419113 K7ERS5 55 aa6.72□□□□□ -1.33
NDUFA3-206ENST00000419113 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
NDUFA3-206ENST00000419113 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
NDUFA3-206ENST00000419113 MACF1Q9UPN3 7388 aaKnown RBP6.54□□□□□ -1.36
NDUFA3-206ENST00000419113 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
NDUFA3-206ENST00000419113 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
NDUFA3-206ENST00000419113 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
NDUFA3-206ENST00000419113 TNP1P09430 55 aa6.46□□□□□ -1.38
NDUFA3-206ENST00000419113 SYNE2Q8WXH0 6885 aaKnown RBP6.45□□□□□ -1.38
NDUFA3-206ENST00000419113 KRTAP6-3Q3LI67 103 aa6.44□□□□□ -1.38
NDUFA3-206ENST00000419113 SVIPQ8NHG7 77 aa6.42□□□□□ -1.38
NDUFA3-206ENST00000419113 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
NDUFA3-206ENST00000419113 BRK1Q8WUW1 75 aa6.39□□□□□ -1.39
NDUFA3-206ENST00000419113 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
NDUFA3-206ENST00000419113 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
NDUFA3-206ENST00000419113 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
NDUFA3-206ENST00000419113 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
NDUFA3-206ENST00000419113 KMT2DO14686 5537 aa6.33□□□□□ -1.4
NDUFA3-206ENST00000419113 ROMO1P60602 79 aa6.3□□□□□ -1.4
NDUFA3-206ENST00000419113 SPRR2FQ96RM1 72 aa6.25□□□□□ -1.41
NDUFA3-206ENST00000419113 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
NDUFA3-206ENST00000419113 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
NDUFA3-206ENST00000419113 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
NDUFA3-206ENST00000419113 NEBP20929 6669 aa6.11□□□□□ -1.43
NDUFA3-206ENST00000419113 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.43
NDUFA3-206ENST00000419113 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
NDUFA3-206ENST00000419113 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
NDUFA3-206ENST00000419113 MT1EP04732 61 aa6.05□□□□□ -1.44
NDUFA3-206ENST00000419113 SPRR2EP22531 72 aa6.05□□□□□ -1.44
NDUFA3-206ENST00000419113 SPRR2BP35325 72 aa6.05□□□□□ -1.44
NDUFA3-206ENST00000419113 SPRR2AP35326 72 aa6.05□□□□□ -1.44
NDUFA3-206ENST00000419113 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
NDUFA3-206ENST00000419113 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms