RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 LCA10Q71F78 164 aa5.59□□□□□ -1.51
SYNC-203ENST00000417633 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
SYNC-203ENST00000417633 KRTAP3-3Q9BYR6 98 aa5.57□□□□□ -1.52
SYNC-203ENST00000417633 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
SYNC-203ENST00000417633 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
SYNC-203ENST00000417633 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
SYNC-203ENST00000417633 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
SYNC-203ENST00000417633 PCP4P48539 62 aa5.48□□□□□ -1.53
SYNC-203ENST00000417633 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
SYNC-203ENST00000417633 TMEM258P61165 79 aa5.47□□□□□ -1.53
SYNC-203ENST00000417633 CHKB-CPT1BH3BT56 60 aa5.45□□□□□ -1.54
SYNC-203ENST00000417633 COA5Q86WW8 74 aa5.45□□□□□ -1.54
SYNC-203ENST00000417633 MT2AP02795 61 aa5.44□□□□□ -1.54
SYNC-203ENST00000417633 SPTSSBQ8NFR3 76 aa5.43□□□□□ -1.54
SYNC-203ENST00000417633 H0YAA0 97 aa5.41□□□□□ -1.54
SYNC-203ENST00000417633 MT1FP04733 61 aa5.4□□□□□ -1.54
SYNC-203ENST00000417633 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
SYNC-203ENST00000417633 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
SYNC-203ENST00000417633 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
SYNC-203ENST00000417633 ADM2Q7Z4H4 148 aa5.32□□□□□ -1.56
SYNC-203ENST00000417633 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
SYNC-203ENST00000417633 KRTAP3-2Q9BYR7 98 aa5.3□□□□□ -1.56
SYNC-203ENST00000417633 SERP1Q9Y6X1 66 aa5.3□□□□□ -1.56
SYNC-203ENST00000417633 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
SYNC-203ENST00000417633 P0C880 135 aa5.26□□□□□ -1.57
SYNC-203ENST00000417633 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
SYNC-203ENST00000417633 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
SYNC-203ENST00000417633 SEC61GP60059 68 aa5.21□□□□□ -1.58
SYNC-203ENST00000417633 LCE2BO14633 110 aa5.2□□□□□ -1.58
SYNC-203ENST00000417633 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
SYNC-203ENST00000417633 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
SYNC-203ENST00000417633 LINC01558Q9Y6Z2 57 aa5.18□□□□□ -1.58
SYNC-203ENST00000417633 R4GN34 69 aa5.16□□□□□ -1.58
SYNC-203ENST00000417633 A0A1B0GU69 56 aa5.15□□□□□ -1.59
SYNC-203ENST00000417633 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
SYNC-203ENST00000417633 M0QZ58 72 aa5.14□□□□□ -1.59
SYNC-203ENST00000417633 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
SYNC-203ENST00000417633 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
SYNC-203ENST00000417633 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
SYNC-203ENST00000417633 V9GYY9 64 aa5.11□□□□□ -1.59
SYNC-203ENST00000417633 A0A1B0GU33 70 aa5.1□□□□□ -1.59
SYNC-203ENST00000417633 Q1T7F1 81 aa5.1□□□□□ -1.59
SYNC-203ENST00000417633 Q5VV11 94 aa5.08□□□□□ -1.6
SYNC-203ENST00000417633 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
SYNC-203ENST00000417633 MT1BP07438 61 aa5.06□□□□□ -1.6
SYNC-203ENST00000417633 USH2AO75445 5202 aa5.04□□□□□ -1.6
SYNC-203ENST00000417633 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
SYNC-203ENST00000417633 A6NN06 94 aa5□□□□□ -1.61
SYNC-203ENST00000417633 SPATA8Q6RVD6 105 aa5□□□□□ -1.61
SYNC-203ENST00000417633 PSPHP1O15172 72 aa4.98□□□□□ -1.61
SYNC-203ENST00000417633 UQCR11O14957 56 aa4.97□□□□□ -1.61
SYNC-203ENST00000417633 PLAC4Q8WY50 150 aa4.97□□□□□ -1.61
SYNC-203ENST00000417633 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
SYNC-203ENST00000417633 SSPOA2VEC9 5147 aa4.93□□□□□ -1.62
SYNC-203ENST00000417633 A0A0D9SG42 100 aa4.93□□□□□ -1.62
SYNC-203ENST00000417633 A8MU10 97 aa4.89□□□□□ -1.63
SYNC-203ENST00000417633 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
SYNC-203ENST00000417633 MIR22HGQ0VDD5 57 aa4.88□□□□□ -1.63
SYNC-203ENST00000417633 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
SYNC-203ENST00000417633 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
SYNC-203ENST00000417633 MT1XP80297 61 aa4.84□□□□□ -1.63
SYNC-203ENST00000417633 A6NED7 52 aa4.83□□□□□ -1.64
SYNC-203ENST00000417633 KRTAP12-2P59991 146 aa4.83□□□□□ -1.64
SYNC-203ENST00000417633 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
SYNC-203ENST00000417633 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
SYNC-203ENST00000417633 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
SYNC-203ENST00000417633 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
SYNC-203ENST00000417633 CAMK2N1Q7Z7J9 78 aa4.78□□□□□ -1.64
SYNC-203ENST00000417633 CDC42SE1Q9NRR8 79 aa4.74□□□□□ -1.65
SYNC-203ENST00000417633 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
SYNC-203ENST00000417633 K7ERS5 55 aa4.7□□□□□ -1.66
SYNC-203ENST00000417633 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
SYNC-203ENST00000417633 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
SYNC-203ENST00000417633 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
SYNC-203ENST00000417633 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
SYNC-203ENST00000417633 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
SYNC-203ENST00000417633 TNP1P09430 55 aa4.54□□□□□ -1.68
SYNC-203ENST00000417633 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.69
SYNC-203ENST00000417633 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
SYNC-203ENST00000417633 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
SYNC-203ENST00000417633 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
SYNC-203ENST00000417633 KMT2DO14686 5537 aa4.47□□□□□ -1.69
SYNC-203ENST00000417633 ROMO1P60602 79 aa4.47□□□□□ -1.69
SYNC-203ENST00000417633 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
SYNC-203ENST00000417633 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
SYNC-203ENST00000417633 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
SYNC-203ENST00000417633 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
SYNC-203ENST00000417633 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
SYNC-203ENST00000417633 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
SYNC-203ENST00000417633 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
SYNC-203ENST00000417633 PMAIP1Q13794 54 aa4.34□□□□□ -1.71
SYNC-203ENST00000417633 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
SYNC-203ENST00000417633 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
SYNC-203ENST00000417633 MT1EP04732 61 aa4.26□□□□□ -1.73
SYNC-203ENST00000417633 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
SYNC-203ENST00000417633 NEBP20929 6669 aa4.26□□□□□ -1.73
SYNC-203ENST00000417633 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
SYNC-203ENST00000417633 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
SYNC-203ENST00000417633 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
SYNC-203ENST00000417633 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms