RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	KRTAP9-3	Q9BYQ3	159 aa		7.9	□□□□□ -1.14
DDR1-231	ENST00000417521	SYNE2	Q8WXH0	6885 aa	Known RBP	7.9	□□□□□ -1.15
DDR1-231	ENST00000417521	H1FX-AS1	Q4G0G2	97 aa		7.89	□□□□□ -1.15
DDR1-231	ENST00000417521	SERP2	Q8N6R1	65 aa		7.87	□□□□□ -1.15
DDR1-231	ENST00000417521	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	7.86	□□□□□ -1.15
DDR1-231	ENST00000417521	KRTAP3-1	Q9BYR8	98 aa		7.86	□□□□□ -1.15
DDR1-231	ENST00000417521	LCE2B	O14633	110 aa		7.84	□□□□□ -1.15
DDR1-231	ENST00000417521	KLKP1	Q107X0	134 aa		7.84	□□□□□ -1.15
DDR1-231	ENST00000417521	MACF1	Q9UPN3	7388 aa	Known RBP	7.82	□□□□□ -1.16
DDR1-231	ENST00000417521	ANAPC13	Q9BS18	74 aa		7.77	□□□□□ -1.17
DDR1-231	ENST00000417521	COX7C	P15954	63 aa		7.76	□□□□□ -1.17
DDR1-231	ENST00000417521	C20orf197	Q8N268	126 aa		7.75	□□□□□ -1.17
DDR1-231	ENST00000417521	SNURF	Q9Y675	71 aa		7.71	□□□□□ -1.18
DDR1-231	ENST00000417521		S4R3F8	94 aa		7.7	□□□□□ -1.18
DDR1-231	ENST00000417521	KRTAP19-1	Q8IUB9	90 aa		7.69	□□□□□ -1.18
DDR1-231	ENST00000417521	LCA10	Q71F78	164 aa		7.68	□□□□□ -1.18
DDR1-231	ENST00000417521		A8MUN3	132 aa		7.64	□□□□□ -1.19
DDR1-231	ENST00000417521	KRTAP3-3	Q9BYR6	98 aa		7.62	□□□□□ -1.19
DDR1-231	ENST00000417521	NDUFC1	O43677	76 aa		7.61	□□□□□ -1.19
DDR1-231	ENST00000417521	DMAC1	Q96GE9	116 aa		7.6	□□□□□ -1.19
DDR1-231	ENST00000417521	KRTAP19-6	Q3LI70	58 aa		7.58	□□□□□ -1.2
DDR1-231	ENST00000417521	CSAG1	Q6PB30	78 aa		7.58	□□□□□ -1.2
DDR1-231	ENST00000417521	CCDC179	H3BU77	68 aa		7.55	□□□□□ -1.2
DDR1-231	ENST00000417521	SPANXA2-OT1	Q8N9U9	137 aa		7.55	□□□□□ -1.2
DDR1-231	ENST00000417521	KRTAP6-3	Q3LI67	103 aa		7.52	□□□□□ -1.21
DDR1-231	ENST00000417521	NEB	P20929	6669 aa		7.52	□□□□□ -1.21
DDR1-231	ENST00000417521	CYSTM1	Q9H1C7	97 aa		7.51	□□□□□ -1.21
DDR1-231	ENST00000417521	ACYP2	P14621	99 aa		7.5	□□□□□ -1.21
DDR1-231	ENST00000417521		H7BZZ5	65 aa		7.49	□□□□□ -1.21
DDR1-231	ENST00000417521	KRTAP20-1	Q3LI63	56 aa		7.49	□□□□□ -1.21
DDR1-231	ENST00000417521	SPRR2G	Q9BYE4	73 aa		7.39	□□□□□ -1.23
DDR1-231	ENST00000417521	CHKB-CPT1B	H3BT56	60 aa		7.37	□□□□□ -1.23
DDR1-231	ENST00000417521	ATP5E	P56381	51 aa	Predicted RBP	7.36	□□□□□ -1.23
DDR1-231	ENST00000417521	SPTSSB	Q8NFR3	76 aa		7.35	□□□□□ -1.23
DDR1-231	ENST00000417521	TMEM258	P61165	79 aa		7.34	□□□□□ -1.23
DDR1-231	ENST00000417521	KRTAP19-8	Q3LI54	63 aa		7.34	□□□□□ -1.23
DDR1-231	ENST00000417521		Q5VV11	94 aa		7.33	□□□□□ -1.24
DDR1-231	ENST00000417521		H0YAA0	97 aa		7.32	□□□□□ -1.24
DDR1-231	ENST00000417521	MT1B	P07438	61 aa		7.32	□□□□□ -1.24
DDR1-231	ENST00000417521	ADM2	Q7Z4H4	148 aa		7.31	□□□□□ -1.24
DDR1-231	ENST00000417521	COA5	Q86WW8	74 aa		7.3	□□□□□ -1.24
DDR1-231	ENST00000417521	CRIPT	Q9P021	101 aa		7.3	□□□□□ -1.24
DDR1-231	ENST00000417521	MUC12	Q9UKN1	5478 aa		7.29	□□□□□ -1.24
DDR1-231	ENST00000417521		A6NN06	94 aa		7.24	□□□□□ -1.25
DDR1-231	ENST00000417521	RPS28	P62857	69 aa	Known RBP	7.24	□□□□□ -1.25
DDR1-231	ENST00000417521	KRTAP3-2	Q9BYR7	98 aa		7.22	□□□□□ -1.25
DDR1-231	ENST00000417521		P0C880	135 aa		7.21	□□□□□ -1.26
DDR1-231	ENST00000417521	KRTAP10-5	P60370	271 aa		7.16	□□□□□ -1.26
DDR1-231	ENST00000417521	SERP1	Q9Y6X1	66 aa		7.11	□□□□□ -1.27
DDR1-231	ENST00000417521		R4GN34	69 aa		7.07	□□□□□ -1.28
DDR1-231	ENST00000417521	SEC61G	P60059	68 aa		7.06	□□□□□ -1.28
DDR1-231	ENST00000417521		M0QZ58	72 aa		7.05	□□□□□ -1.28
DDR1-231	ENST00000417521	KRTAP2-3	P0C7H8	128 aa		6.98	□□□□□ -1.29
DDR1-231	ENST00000417521	KRTAP2-4	Q9BYR9	128 aa		6.98	□□□□□ -1.29
DDR1-231	ENST00000417521	KMT2D	O14686	5537 aa		6.97	□□□□□ -1.29
DDR1-231	ENST00000417521		A0A1B0GU69	56 aa		6.95	□□□□□ -1.3
DDR1-231	ENST00000417521	LINC01554	Q52M75	96 aa		6.95	□□□□□ -1.3
DDR1-231	ENST00000417521	PLAC4	Q8WY50	150 aa		6.93	□□□□□ -1.3
DDR1-231	ENST00000417521	PRR15L	Q9BU68	103 aa		6.92	□□□□□ -1.3
DDR1-231	ENST00000417521	LINC01558	Q9Y6Z2	57 aa		6.92	□□□□□ -1.3
DDR1-231	ENST00000417521	MDN1	Q9NU22	5596 aa		6.92	□□□□□ -1.3
DDR1-231	ENST00000417521	PRO2289	Q9P1D8	64 aa		6.92	□□□□□ -1.3
DDR1-231	ENST00000417521	KRTAP13-4	Q3LI77	160 aa		6.91	□□□□□ -1.3
DDR1-231	ENST00000417521	GPR98	Q8WXG9	6306 aa		6.9	□□□□□ -1.3
DDR1-231	ENST00000417521	SMIM26	A0A096LP01	95 aa		6.89	□□□□□ -1.31
DDR1-231	ENST00000417521		V9GYY9	64 aa		6.89	□□□□□ -1.31
DDR1-231	ENST00000417521	KRTAP5-9	P26371	169 aa		6.87	□□□□□ -1.31
DDR1-231	ENST00000417521	MT1X	P80297	61 aa		6.87	□□□□□ -1.31
DDR1-231	ENST00000417521		A0A1B0GU33	70 aa		6.85	□□□□□ -1.31
DDR1-231	ENST00000417521	PRO0628	Q9UI54	55 aa		6.85	□□□□□ -1.31
DDR1-231	ENST00000417521		Q1T7F1	81 aa		6.83	□□□□□ -1.32
DDR1-231	ENST00000417521	SPATA8	Q6RVD6	105 aa		6.8	□□□□□ -1.32
DDR1-231	ENST00000417521		A0A0D9SG42	100 aa		6.73	□□□□□ -1.33
DDR1-231	ENST00000417521	KRTAP12-2	P59991	146 aa		6.73	□□□□□ -1.33
DDR1-231	ENST00000417521	PSPHP1	O15172	72 aa		6.71	□□□□□ -1.34
DDR1-231	ENST00000417521	KRTAP2-2	Q9BYT5	123 aa		6.71	□□□□□ -1.34
DDR1-231	ENST00000417521	KRTAP2-1	Q9BYU5	128 aa		6.71	□□□□□ -1.34
DDR1-231	ENST00000417521	UQCR11	O14957	56 aa		6.69	□□□□□ -1.34
DDR1-231	ENST00000417521	KRTAP8-1	Q8IUC2	63 aa		6.65	□□□□□ -1.35
DDR1-231	ENST00000417521	SPRR2F	Q96RM1	72 aa		6.65	□□□□□ -1.35
DDR1-231	ENST00000417521		A8MU10	97 aa		6.64	□□□□□ -1.35
DDR1-231	ENST00000417521	KRTAP12-1	P59990	96 aa		6.6	□□□□□ -1.35
DDR1-231	ENST00000417521	SPINT4	Q6UDR6	99 aa		6.6	□□□□□ -1.35
DDR1-231	ENST00000417521	CAMK2N1	Q7Z7J9	78 aa		6.57	□□□□□ -1.36
DDR1-231	ENST00000417521	KRTAP4-8	A0A0G2JLE6	195 aa		6.56	□□□□□ -1.36
DDR1-231	ENST00000417521	MIR22HG	Q0VDD5	57 aa		6.56	□□□□□ -1.36
DDR1-231	ENST00000417521	KRTAP4-8	Q9BYQ9	185 aa		6.56	□□□□□ -1.36
DDR1-231	ENST00000417521	KRTAP10-7	P60409	375 aa	Predicted RBP	6.55	□□□□□ -1.36
DDR1-231	ENST00000417521	SPRR2E	P22531	72 aa		6.54	□□□□□ -1.36
DDR1-231	ENST00000417521	SPRR2B	P35325	72 aa		6.54	□□□□□ -1.36
DDR1-231	ENST00000417521	SPRR2A	P35326	72 aa		6.54	□□□□□ -1.36
DDR1-231	ENST00000417521	KRTAP10-12	P60413	245 aa		6.54	□□□□□ -1.36
DDR1-231	ENST00000417521		A6NED7	52 aa		6.53	□□□□□ -1.36
DDR1-231	ENST00000417521	BRK1	Q8WUW1	75 aa		6.51	□□□□□ -1.37
DDR1-231	ENST00000417521	LCE1A	Q5T7P2	110 aa		6.47	□□□□□ -1.37
DDR1-231	ENST00000417521	PMAIP1	Q13794	54 aa		6.43	□□□□□ -1.38
DDR1-231	ENST00000417521		K7ERS5	55 aa		6.41	□□□□□ -1.38
DDR1-231	ENST00000417521	CDC42SE1	Q9NRR8	79 aa		6.35	□□□□□ -1.39
DDR1-231	ENST00000417521	SPRR2D	P22532	72 aa		6.33	□□□□□ -1.4
DDR1-231	ENST00000417521	C10orf95	Q9H7T3	257 aa		6.28	□□□□□ -1.4

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