RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 A0A1B0GU69 56 aa9.68□□□□□ -0.86
RAB3IP-205ENST00000417413 BRK1Q8WUW1 75 aa9.65□□□□□ -0.86
RAB3IP-205ENST00000417413 H1FX-AS1Q4G0G2 97 aa9.64□□□□□ -0.87
RAB3IP-205ENST00000417413 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
RAB3IP-205ENST00000417413 KRTAP4-1Q9BYQ7 146 aa9.64□□□□□ -0.87
RAB3IP-205ENST00000417413 RBM12B-AS1Q9P1G2 102 aa9.64□□□□□ -0.87
RAB3IP-205ENST00000417413 LCA10Q71F78 164 aa9.63□□□□□ -0.87
RAB3IP-205ENST00000417413 S4R3F8 94 aa9.61□□□□□ -0.87
RAB3IP-205ENST00000417413 A6NED7 52 aa9.59□□□□□ -0.87
RAB3IP-205ENST00000417413 PRO0628Q9UI54 55 aa9.56□□□□□ -0.88
RAB3IP-205ENST00000417413 SEC61GP60059 68 aa9.53□□□□□ -0.88
RAB3IP-205ENST00000417413 MUC17Q685J3 4493 aa9.53□□□□□ -0.88
RAB3IP-205ENST00000417413 A8MU10 97 aa9.52□□□□□ -0.89
RAB3IP-205ENST00000417413 CDC42SE1Q9NRR8 79 aa9.48□□□□□ -0.89
RAB3IP-205ENST00000417413 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
RAB3IP-205ENST00000417413 KRTAP19-2Q3LHN2 52 aa9.43□□□□□ -0.9
RAB3IP-205ENST00000417413 UQCR11O14957 56 aa9.42□□□□□ -0.9
RAB3IP-205ENST00000417413 SPATA8Q6RVD6 105 aa9.38□□□□□ -0.91
RAB3IP-205ENST00000417413 CSAG1Q6PB30 78 aa9.36□□□□□ -0.91
RAB3IP-205ENST00000417413 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
RAB3IP-205ENST00000417413 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-205ENST00000417413 MIR22HGQ0VDD5 57 aa9.35□□□□□ -0.91
RAB3IP-205ENST00000417413 UBR4Q5T4S7 5183 aa9.34□□□□□ -0.91
RAB3IP-205ENST00000417413 A0A1B0GU33 70 aa9.34□□□□□ -0.91
RAB3IP-205ENST00000417413 H0YAA0 97 aa9.26□□□□□ -0.93
RAB3IP-205ENST00000417413 MUC2Q02817 5179 aa9.25□□□□□ -0.93
RAB3IP-205ENST00000417413 SVIPQ8NHG7 77 aa9.24□□□□□ -0.93
RAB3IP-205ENST00000417413 P0C880 135 aa9.23□□□□□ -0.93
RAB3IP-205ENST00000417413 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
RAB3IP-205ENST00000417413 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
RAB3IP-205ENST00000417413 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
RAB3IP-205ENST00000417413 PMAIP1Q13794 54 aa9.13□□□□□ -0.95
RAB3IP-205ENST00000417413 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
RAB3IP-205ENST00000417413 A6NN06 94 aa9.09□□□□□ -0.95
RAB3IP-205ENST00000417413 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
RAB3IP-205ENST00000417413 M0QZ58 72 aa8.97□□□□□ -0.97
RAB3IP-205ENST00000417413 M0R2T5 61 aa8.97□□□□□ -0.97
RAB3IP-205ENST00000417413 MT1HP80294 61 aa8.94□□□□□ -0.98
RAB3IP-205ENST00000417413 A0A0D9SG42 100 aa8.93□□□□□ -0.98
RAB3IP-205ENST00000417413 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
RAB3IP-205ENST00000417413 FAT4Q6V0I7 4981 aa8.89□□□□□ -0.99
RAB3IP-205ENST00000417413 R4GN34 69 aa8.84□□□□□ -0.99
RAB3IP-205ENST00000417413 K7ERS5 55 aa8.83□□□□□ -1
RAB3IP-205ENST00000417413 KTN1-AS1Q86SY8 53 aa8.81□□□□□ -1
RAB3IP-205ENST00000417413 KRTAP12-1P59990 96 aa8.78□□□□□ -1
RAB3IP-205ENST00000417413 KRTAP12-2P59991 146 aa8.77□□□□□ -1.01
RAB3IP-205ENST00000417413 LINC01554Q52M75 96 aa8.71□□□□□ -1.02
RAB3IP-205ENST00000417413 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
RAB3IP-205ENST00000417413 CRIPTQ9P021 101 aa8.69□□□□□ -1.02
RAB3IP-205ENST00000417413 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
RAB3IP-205ENST00000417413 LOC100996750A0A140TA64 210 aa8.62□□□□□ -1.03
RAB3IP-205ENST00000417413 KRTAP4-6Q9BYQ5 205 aa8.62□□□□□ -1.03
RAB3IP-205ENST00000417413 KRTAP9-8Q9BYQ0 159 aa8.6□□□□□ -1.03
RAB3IP-205ENST00000417413 MT2AP02795 61 aa8.58□□□□□ -1.04
RAB3IP-205ENST00000417413 PRAC1Q96KF2 57 aa8.58□□□□□ -1.04
RAB3IP-205ENST00000417413 ROMO1P60602 79 aa8.56□□□□□ -1.04
RAB3IP-205ENST00000417413 MT1FP04733 61 aa8.55□□□□□ -1.04
RAB3IP-205ENST00000417413 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
RAB3IP-205ENST00000417413 SPRR2GQ9BYE4 73 aa8.51□□□□□ -1.05
RAB3IP-205ENST00000417413 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
RAB3IP-205ENST00000417413 KRTAP25-1Q3LHN0 102 aa8.31□□□□□ -1.08
RAB3IP-205ENST00000417413 C10orf95Q9H7T3 257 aa8.31□□□□□ -1.08
RAB3IP-205ENST00000417413 CAMK2N1Q7Z7J9 78 aa8.3□□□□□ -1.08
RAB3IP-205ENST00000417413 KRTAP9-3Q9BYQ3 159 aa8.28□□□□□ -1.08
RAB3IP-205ENST00000417413 KRTAP19-8Q3LI54 63 aa8.27□□□□□ -1.09
RAB3IP-205ENST00000417413 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
RAB3IP-205ENST00000417413 MT1BP07438 61 aa8.15□□□□□ -1.1
RAB3IP-205ENST00000417413 LCE2BO14633 110 aa8.03□□□□□ -1.12
RAB3IP-205ENST00000417413 TNP1P09430 55 aa7.95□□□□□ -1.14
RAB3IP-205ENST00000417413 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
RAB3IP-205ENST00000417413 MT1XP80297 61 aa7.92□□□□□ -1.14
RAB3IP-205ENST00000417413 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
RAB3IP-205ENST00000417413 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
RAB3IP-205ENST00000417413 USH2AO75445 5202 aa7.8□□□□□ -1.16
RAB3IP-205ENST00000417413 KRTAP23-1A1A580 65 aa7.79□□□□□ -1.16
RAB3IP-205ENST00000417413 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
RAB3IP-205ENST00000417413 KRTAP19-6Q3LI70 58 aa7.65□□□□□ -1.18
RAB3IP-205ENST00000417413 KRTAP10-7P60409 375 aaPredicted RBP7.63□□□□□ -1.19
RAB3IP-205ENST00000417413 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
RAB3IP-205ENST00000417413 FSIP2Q5CZC0 6907 aa7.59□□□□□ -1.19
RAB3IP-205ENST00000417413 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
RAB3IP-205ENST00000417413 SSPOA2VEC9 5147 aa7.53□□□□□ -1.2
RAB3IP-205ENST00000417413 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
RAB3IP-205ENST00000417413 CRCT1Q9UGL9 99 aa7.47□□□□□ -1.21
RAB3IP-205ENST00000417413 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.21
RAB3IP-205ENST00000417413 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
RAB3IP-205ENST00000417413 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
RAB3IP-205ENST00000417413 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
RAB3IP-205ENST00000417413 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
RAB3IP-205ENST00000417413 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
RAB3IP-205ENST00000417413 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
RAB3IP-205ENST00000417413 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
RAB3IP-205ENST00000417413 SPRR5A0A1B0GTR4 108 aa7.09□□□□□ -1.27
RAB3IP-205ENST00000417413 KMT2DO14686 5537 aa7.08□□□□□ -1.28
RAB3IP-205ENST00000417413 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
RAB3IP-205ENST00000417413 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
RAB3IP-205ENST00000417413 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
RAB3IP-205ENST00000417413 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
RAB3IP-205ENST00000417413 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
RAB3IP-205ENST00000417413 KRTAP4-7Q9BYR0 210 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms