RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 ATOX1O00244 68 aa5.2□□□□□ -1.58
HLA-DMB-257ENST00000414017 MP68P56378 58 aa5.2□□□□□ -1.58
HLA-DMB-257ENST00000414017 C1orf64Q8NEQ6 169 aa5.19□□□□□ -1.58
HLA-DMB-257ENST00000414017 LINC00208Q96KT6 92 aa5.19□□□□□ -1.58
HLA-DMB-257ENST00000414017 CYP4F30PQ9H0H9 118 aa5.19□□□□□ -1.58
HLA-DMB-257ENST00000414017 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.59
HLA-DMB-257ENST00000414017 C5orf47Q569G3 176 aa5.15□□□□□ -1.59
HLA-DMB-257ENST00000414017 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
HLA-DMB-257ENST00000414017 KRTAP10-6P60371 365 aaPredicted RBP5.13□□□□□ -1.59
HLA-DMB-257ENST00000414017 TRAV7A0A075B6U4 112 aa5.12□□□□□ -1.59
HLA-DMB-257ENST00000414017 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
HLA-DMB-257ENST00000414017 KLKP1Q107X0 134 aa5.11□□□□□ -1.59
HLA-DMB-257ENST00000414017 H3BPC8 53 aa5.1□□□□□ -1.59
HLA-DMB-257ENST00000414017 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
HLA-DMB-257ENST00000414017 S4R3F8 94 aa5.07□□□□□ -1.6
HLA-DMB-257ENST00000414017 SERP2Q8N6R1 65 aa5.04□□□□□ -1.6
HLA-DMB-257ENST00000414017 SNURFQ9Y675 71 aa5.04□□□□□ -1.6
HLA-DMB-257ENST00000414017 H3BS24 57 aa5.03□□□□□ -1.6
HLA-DMB-257ENST00000414017 LCA10Q71F78 164 aa5.02□□□□□ -1.61
HLA-DMB-257ENST00000414017 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
HLA-DMB-257ENST00000414017 PCP4P48539 62 aa5.01□□□□□ -1.61
HLA-DMB-257ENST00000414017 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
HLA-DMB-257ENST00000414017 A8MUN3 132 aa4.98□□□□□ -1.61
HLA-DMB-257ENST00000414017 MT2AP02795 61 aa4.98□□□□□ -1.61
HLA-DMB-257ENST00000414017 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
HLA-DMB-257ENST00000414017 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
HLA-DMB-257ENST00000414017 COX7CP15954 63 aa4.96□□□□□ -1.62
HLA-DMB-257ENST00000414017 ANAPC13Q9BS18 74 aa4.95□□□□□ -1.62
HLA-DMB-257ENST00000414017 NDUFC1O43677 76 aa4.94□□□□□ -1.62
HLA-DMB-257ENST00000414017 MT1FP04733 61 aa4.94□□□□□ -1.62
HLA-DMB-257ENST00000414017 DMAC1Q96GE9 116 aa4.94□□□□□ -1.62
HLA-DMB-257ENST00000414017 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
HLA-DMB-257ENST00000414017 ACYP2P14621 99 aa4.89□□□□□ -1.63
HLA-DMB-257ENST00000414017 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
HLA-DMB-257ENST00000414017 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
HLA-DMB-257ENST00000414017 CYSTM1Q9H1C7 97 aa4.85□□□□□ -1.63
HLA-DMB-257ENST00000414017 CCDC179H3BU77 68 aa4.84□□□□□ -1.63
HLA-DMB-257ENST00000414017 H7BZZ5 65 aa4.8□□□□□ -1.64
HLA-DMB-257ENST00000414017 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
HLA-DMB-257ENST00000414017 SPTSSBQ8NFR3 76 aa4.8□□□□□ -1.64
HLA-DMB-257ENST00000414017 COA5Q86WW8 74 aa4.77□□□□□ -1.65
HLA-DMB-257ENST00000414017 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
HLA-DMB-257ENST00000414017 USH2AO75445 5202 aa4.75□□□□□ -1.65
HLA-DMB-257ENST00000414017 H0YAA0 97 aa4.75□□□□□ -1.65
HLA-DMB-257ENST00000414017 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
HLA-DMB-257ENST00000414017 P0C880 135 aa4.7□□□□□ -1.66
HLA-DMB-257ENST00000414017 CRIPTQ9P021 101 aa4.69□□□□□ -1.66
HLA-DMB-257ENST00000414017 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
HLA-DMB-257ENST00000414017 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
HLA-DMB-257ENST00000414017 R4GN34 69 aa4.66□□□□□ -1.66
HLA-DMB-257ENST00000414017 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
HLA-DMB-257ENST00000414017 M0QZ58 72 aa4.65□□□□□ -1.67
HLA-DMB-257ENST00000414017 Q5VV11 94 aa4.64□□□□□ -1.67
HLA-DMB-257ENST00000414017 TMEM258P61165 79 aa4.63□□□□□ -1.67
HLA-DMB-257ENST00000414017 SEC61GP60059 68 aa4.61□□□□□ -1.67
HLA-DMB-257ENST00000414017 LINC01554Q52M75 96 aa4.61□□□□□ -1.67
HLA-DMB-257ENST00000414017 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.67
HLA-DMB-257ENST00000414017 SERP1Q9Y6X1 66 aa4.59□□□□□ -1.67
HLA-DMB-257ENST00000414017 MT1BP07438 61 aa4.58□□□□□ -1.68
HLA-DMB-257ENST00000414017 KRTAP19-6Q3LI70 58 aa4.54□□□□□ -1.68
HLA-DMB-257ENST00000414017 A0A1B0GU69 56 aa4.53□□□□□ -1.68
HLA-DMB-257ENST00000414017 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
HLA-DMB-257ENST00000414017 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
HLA-DMB-257ENST00000414017 A6NN06 94 aa4.49□□□□□ -1.69
HLA-DMB-257ENST00000414017 A0A1B0GU33 70 aa4.48□□□□□ -1.69
HLA-DMB-257ENST00000414017 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
HLA-DMB-257ENST00000414017 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
HLA-DMB-257ENST00000414017 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
HLA-DMB-257ENST00000414017 A0A0D9SG42 100 aa4.45□□□□□ -1.7
HLA-DMB-257ENST00000414017 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
HLA-DMB-257ENST00000414017 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
HLA-DMB-257ENST00000414017 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
HLA-DMB-257ENST00000414017 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
HLA-DMB-257ENST00000414017 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
HLA-DMB-257ENST00000414017 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
HLA-DMB-257ENST00000414017 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
HLA-DMB-257ENST00000414017 MT1XP80297 61 aa4.36□□□□□ -1.71
HLA-DMB-257ENST00000414017 A8MU10 97 aa4.35□□□□□ -1.71
HLA-DMB-257ENST00000414017 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
HLA-DMB-257ENST00000414017 V9GYY9 64 aa4.34□□□□□ -1.71
HLA-DMB-257ENST00000414017 PSPHP1O15172 72 aa4.33□□□□□ -1.72
HLA-DMB-257ENST00000414017 UQCR11O14957 56 aa4.3□□□□□ -1.72
HLA-DMB-257ENST00000414017 Q1T7F1 81 aa4.3□□□□□ -1.72
HLA-DMB-257ENST00000414017 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
HLA-DMB-257ENST00000414017 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
HLA-DMB-257ENST00000414017 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
HLA-DMB-257ENST00000414017 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
HLA-DMB-257ENST00000414017 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
HLA-DMB-257ENST00000414017 A6NED7 52 aa4.2□□□□□ -1.74
HLA-DMB-257ENST00000414017 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
HLA-DMB-257ENST00000414017 KMT2DO14686 5537 aa4.2□□□□□ -1.74
HLA-DMB-257ENST00000414017 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
HLA-DMB-257ENST00000414017 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.75
HLA-DMB-257ENST00000414017 K7ERS5 55 aa4.13□□□□□ -1.75
HLA-DMB-257ENST00000414017 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
HLA-DMB-257ENST00000414017 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
HLA-DMB-257ENST00000414017 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
HLA-DMB-257ENST00000414017 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
HLA-DMB-257ENST00000414017 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
HLA-DMB-257ENST00000414017 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms