RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
SF1-207ENST00000413951 H3BPC8 53 aa8.01□□□□□ -1.13
SF1-207ENST00000413951 SMIM20Q8N5G0 67 aa8.01□□□□□ -1.13
SF1-207ENST00000413951 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
SF1-207ENST00000413951 KRTAP19-6Q3LI70 58 aa8□□□□□ -1.13
SF1-207ENST00000413951 TRAV7A0A075B6U4 112 aa7.98□□□□□ -1.13
SF1-207ENST00000413951 SYNE2Q8WXH0 6885 aaKnown RBP7.97□□□□□ -1.13
SF1-207ENST00000413951 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
SF1-207ENST00000413951 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
SF1-207ENST00000413951 A8MUN3 132 aa7.84□□□□□ -1.15
SF1-207ENST00000413951 S4R3F8 94 aa7.83□□□□□ -1.16
SF1-207ENST00000413951 LCA10Q71F78 164 aa7.8□□□□□ -1.16
SF1-207ENST00000413951 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
SF1-207ENST00000413951 KRTAP3-3Q9BYR6 98 aa7.77□□□□□ -1.17
SF1-207ENST00000413951 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
SF1-207ENST00000413951 C20orf197Q8N268 126 aa7.74□□□□□ -1.17
SF1-207ENST00000413951 SNURFQ9Y675 71 aa7.74□□□□□ -1.17
SF1-207ENST00000413951 CSAG1Q6PB30 78 aa7.73□□□□□ -1.17
SF1-207ENST00000413951 COX7CP15954 63 aa7.72□□□□□ -1.17
SF1-207ENST00000413951 SPANXA2-OT1Q8N9U9 137 aa7.65□□□□□ -1.18
SF1-207ENST00000413951 NDUFC1O43677 76 aa7.64□□□□□ -1.19
SF1-207ENST00000413951 ANAPC13Q9BS18 74 aa7.62□□□□□ -1.19
SF1-207ENST00000413951 A6NN06 94 aa7.6□□□□□ -1.19
SF1-207ENST00000413951 ACYP2P14621 99 aa7.58□□□□□ -1.2
SF1-207ENST00000413951 Q5VV11 94 aa7.58□□□□□ -1.2
SF1-207ENST00000413951 CYSTM1Q9H1C7 97 aa7.56□□□□□ -1.2
SF1-207ENST00000413951 H0YAA0 97 aa7.55□□□□□ -1.2
SF1-207ENST00000413951 H7BZZ5 65 aa7.53□□□□□ -1.2
SF1-207ENST00000413951 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
SF1-207ENST00000413951 NEBP20929 6669 aa7.5□□□□□ -1.21
SF1-207ENST00000413951 KRTAP19-8Q3LI54 63 aa7.49□□□□□ -1.21
SF1-207ENST00000413951 MT1BP07438 61 aa7.48□□□□□ -1.21
SF1-207ENST00000413951 CCDC179H3BU77 68 aa7.47□□□□□ -1.21
SF1-207ENST00000413951 CRIPTQ9P021 101 aa7.42□□□□□ -1.22
SF1-207ENST00000413951 CHKB-CPT1BH3BT56 60 aa7.41□□□□□ -1.22
SF1-207ENST00000413951 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
SF1-207ENST00000413951 SPTSSBQ8NFR3 76 aa7.41□□□□□ -1.22
SF1-207ENST00000413951 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
SF1-207ENST00000413951 COA5Q86WW8 74 aa7.37□□□□□ -1.23
SF1-207ENST00000413951 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
SF1-207ENST00000413951 MUC12Q9UKN1 5478 aa7.35□□□□□ -1.23
SF1-207ENST00000413951 P0C880 135 aa7.32□□□□□ -1.24
SF1-207ENST00000413951 PCP4P48539 62 aa7.32□□□□□ -1.24
SF1-207ENST00000413951 KRTAP20-1Q3LI63 56 aa7.31□□□□□ -1.24
SF1-207ENST00000413951 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
SF1-207ENST00000413951 ATP5EP56381 51 aaPredicted RBP7.28□□□□□ -1.24
SF1-207ENST00000413951 TMEM258P61165 79 aa7.23□□□□□ -1.25
SF1-207ENST00000413951 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
SF1-207ENST00000413951 R4GN34 69 aa7.18□□□□□ -1.26
SF1-207ENST00000413951 KMT2DO14686 5537 aa7.15□□□□□ -1.26
SF1-207ENST00000413951 M0QZ58 72 aa7.14□□□□□ -1.27
SF1-207ENST00000413951 MDN1Q9NU22 5596 aa7.1□□□□□ -1.27
SF1-207ENST00000413951 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
SF1-207ENST00000413951 PLAC4Q8WY50 150 aa7.08□□□□□ -1.28
SF1-207ENST00000413951 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
SF1-207ENST00000413951 SEC61GP60059 68 aa7.05□□□□□ -1.28
SF1-207ENST00000413951 SPRR2FQ96RM1 72 aa7.04□□□□□ -1.28
SF1-207ENST00000413951 SERP1Q9Y6X1 66 aa7.03□□□□□ -1.28
SF1-207ENST00000413951 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
SF1-207ENST00000413951 SPRR2EP22531 72 aa6.99□□□□□ -1.29
SF1-207ENST00000413951 SPRR2BP35325 72 aa6.99□□□□□ -1.29
SF1-207ENST00000413951 SPRR2AP35326 72 aa6.99□□□□□ -1.29
SF1-207ENST00000413951 LINC01554Q52M75 96 aa6.98□□□□□ -1.29
SF1-207ENST00000413951 A0A1B0GU69 56 aa6.96□□□□□ -1.3
SF1-207ENST00000413951 MT1XP80297 61 aa6.96□□□□□ -1.3
SF1-207ENST00000413951 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.3
SF1-207ENST00000413951 A0A1B0GU33 70 aa6.93□□□□□ -1.3
SF1-207ENST00000413951 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
SF1-207ENST00000413951 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
SF1-207ENST00000413951 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
SF1-207ENST00000413951 SPATA8Q6RVD6 105 aa6.85□□□□□ -1.31
SF1-207ENST00000413951 KRTAP2-2Q9BYT5 123 aa6.85□□□□□ -1.31
SF1-207ENST00000413951 KRTAP2-1Q9BYU5 128 aa6.85□□□□□ -1.31
SF1-207ENST00000413951 LCE1AQ5T7P2 110 aa6.83□□□□□ -1.32
SF1-207ENST00000413951 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
SF1-207ENST00000413951 SPRR2DP22532 72 aa6.77□□□□□ -1.33
SF1-207ENST00000413951 A0A0D9SG42 100 aa6.76□□□□□ -1.33
SF1-207ENST00000413951 Q1T7F1 81 aa6.75□□□□□ -1.33
SF1-207ENST00000413951 V9GYY9 64 aa6.74□□□□□ -1.33
SF1-207ENST00000413951 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
SF1-207ENST00000413951 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
SF1-207ENST00000413951 KRTAP12-1P59990 96 aa6.7□□□□□ -1.34
SF1-207ENST00000413951 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
SF1-207ENST00000413951 A8MU10 97 aa6.68□□□□□ -1.34
SF1-207ENST00000413951 UQCR11O14957 56 aa6.66□□□□□ -1.34
SF1-207ENST00000413951 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
SF1-207ENST00000413951 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
SF1-207ENST00000413951 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
SF1-207ENST00000413951 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
SF1-207ENST00000413951 PSPHP1O15172 72 aa6.61□□□□□ -1.35
SF1-207ENST00000413951 LCE3BQ5TA77 95 aa6.6□□□□□ -1.35
SF1-207ENST00000413951 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
SF1-207ENST00000413951 A6NED7 52 aa6.41□□□□□ -1.38
SF1-207ENST00000413951 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
SF1-207ENST00000413951 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
SF1-207ENST00000413951 K7ERS5 55 aa6.31□□□□□ -1.4
SF1-207ENST00000413951 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
SF1-207ENST00000413951 TNP1P09430 55 aa6.25□□□□□ -1.41
SF1-207ENST00000413951 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
SF1-207ENST00000413951 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms