RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	LINC00208	Q96KT6	92 aa		6.54	□□□□□ -1.36
SF1-206	ENST00000413725		H3BPC8	53 aa		6.53	□□□□□ -1.36
SF1-206	ENST00000413725	TRAV7	A0A075B6U4	112 aa		6.52	□□□□□ -1.37
SF1-206	ENST00000413725	H1FX-AS1	Q4G0G2	97 aa		6.51	□□□□□ -1.37
SF1-206	ENST00000413725	KRTAP10-6	P60371	365 aa	Predicted RBP	6.45	□□□□□ -1.38
SF1-206	ENST00000413725	KRTAP4-9	Q9BYQ8	210 aa		6.45	□□□□□ -1.38
SF1-206	ENST00000413725	KLKP1	Q107X0	134 aa		6.44	□□□□□ -1.38
SF1-206	ENST00000413725	KRTAP3-1	Q9BYR8	98 aa		6.42	□□□□□ -1.38
SF1-206	ENST00000413725	SERP2	Q8N6R1	65 aa		6.41	□□□□□ -1.38
SF1-206	ENST00000413725	KRTAP4-2	Q9BYR5	136 aa		6.39	□□□□□ -1.39
SF1-206	ENST00000413725		S4R3F8	94 aa		6.38	□□□□□ -1.39
SF1-206	ENST00000413725		A8MUN3	132 aa		6.37	□□□□□ -1.39
SF1-206	ENST00000413725	KRTAP19-4	Q3LI73	84 aa		6.34	□□□□□ -1.39
SF1-206	ENST00000413725	C20orf197	Q8N268	126 aa		6.34	□□□□□ -1.39
SF1-206	ENST00000413725	SNURF	Q9Y675	71 aa		6.33	□□□□□ -1.4
SF1-206	ENST00000413725	LCA10	Q71F78	164 aa		6.32	□□□□□ -1.4
SF1-206	ENST00000413725	COX7C	P15954	63 aa		6.3	□□□□□ -1.4
SF1-206	ENST00000413725	KRTAP9-8	Q9BYQ0	159 aa		6.3	□□□□□ -1.4
SF1-206	ENST00000413725	CSAG1	Q6PB30	78 aa		6.29	□□□□□ -1.4
SF1-206	ENST00000413725	DMAC1	Q96GE9	116 aa		6.28	□□□□□ -1.4
SF1-206	ENST00000413725	ANAPC13	Q9BS18	74 aa		6.27	□□□□□ -1.41
SF1-206	ENST00000413725	MT2A	P02795	61 aa		6.26	□□□□□ -1.41
SF1-206	ENST00000413725	NDUFC1	O43677	76 aa		6.25	□□□□□ -1.41
SF1-206	ENST00000413725	PCP4	P48539	62 aa		6.22	□□□□□ -1.41
SF1-206	ENST00000413725	KRTAP10-10	P60014	251 aa		6.22	□□□□□ -1.41
SF1-206	ENST00000413725	SPANXA2-OT1	Q8N9U9	137 aa		6.22	□□□□□ -1.41
SF1-206	ENST00000413725	ACYP2	P14621	99 aa		6.21	□□□□□ -1.42
SF1-206	ENST00000413725	MT1F	P04733	61 aa		6.2	□□□□□ -1.42
SF1-206	ENST00000413725	FSIP2	Q5CZC0	6907 aa		6.17	□□□□□ -1.42
SF1-206	ENST00000413725	KRTAP4-11	Q9BYQ6	195 aa		6.16	□□□□□ -1.42
SF1-206	ENST00000413725	CHKB-CPT1B	H3BT56	60 aa		6.12	□□□□□ -1.43
SF1-206	ENST00000413725		H7BZZ5	65 aa		6.12	□□□□□ -1.43
SF1-206	ENST00000413725	CYSTM1	Q9H1C7	97 aa		6.11	□□□□□ -1.43
SF1-206	ENST00000413725	CCDC179	H3BU77	68 aa		6.1	□□□□□ -1.43
SF1-206	ENST00000413725	SPTSSB	Q8NFR3	76 aa		6.1	□□□□□ -1.43
SF1-206	ENST00000413725	KRTAP9-3	Q9BYQ3	159 aa		6.09	□□□□□ -1.43
SF1-206	ENST00000413725		H0YAA0	97 aa		6.08	□□□□□ -1.44
SF1-206	ENST00000413725	LCE4A	Q5TA78	99 aa		6.08	□□□□□ -1.44
SF1-206	ENST00000413725	CRCT1	Q9UGL9	99 aa		6.05	□□□□□ -1.44
SF1-206	ENST00000413725	ADM2	Q7Z4H4	148 aa		6.03	□□□□□ -1.44
SF1-206	ENST00000413725	SVIP	Q8NHG7	77 aa		6.03	□□□□□ -1.44
SF1-206	ENST00000413725	COA5	Q86WW8	74 aa		6.02	□□□□□ -1.45
SF1-206	ENST00000413725	CRIPT	Q9P021	101 aa		5.99	□□□□□ -1.45
SF1-206	ENST00000413725	ATP5E	P56381	51 aa	Predicted RBP	5.98	□□□□□ -1.45
SF1-206	ENST00000413725	KRTAP5-3	Q6L8H2	238 aa		5.96	□□□□□ -1.46
SF1-206	ENST00000413725	KRTAP9-7	A8MTY7	169 aa		5.94	□□□□□ -1.46
SF1-206	ENST00000413725	TMEM258	P61165	79 aa		5.93	□□□□□ -1.46
SF1-206	ENST00000413725	SPRR2G	Q9BYE4	73 aa		5.93	□□□□□ -1.46
SF1-206	ENST00000413725		P0C880	135 aa		5.91	□□□□□ -1.46
SF1-206	ENST00000413725	USH2A	O75445	5202 aa		5.91	□□□□□ -1.46
SF1-206	ENST00000413725		R4GN34	69 aa		5.87	□□□□□ -1.47
SF1-206	ENST00000413725	KRTAP23-1	A1A580	65 aa		5.85	□□□□□ -1.47
SF1-206	ENST00000413725		Q5VV11	94 aa		5.85	□□□□□ -1.47
SF1-206	ENST00000413725	KRTAP19-8	Q3LI54	63 aa		5.84	□□□□□ -1.47
SF1-206	ENST00000413725		M0QZ58	72 aa		5.83	□□□□□ -1.48
SF1-206	ENST00000413725	SEC61G	P60059	68 aa		5.83	□□□□□ -1.48
SF1-206	ENST00000413725	LCE5A	Q5TCM9	118 aa		5.83	□□□□□ -1.48
SF1-206	ENST00000413725	SERP1	Q9Y6X1	66 aa		5.81	□□□□□ -1.48
SF1-206	ENST00000413725	SSPO	A2VEC9	5147 aa		5.81	□□□□□ -1.48
SF1-206	ENST00000413725	MT1B	P07438	61 aa		5.78	□□□□□ -1.48
SF1-206	ENST00000413725	KRTAP19-6	Q3LI70	58 aa		5.74	□□□□□ -1.49
SF1-206	ENST00000413725		A0A1B0GU69	56 aa		5.73	□□□□□ -1.49
SF1-206	ENST00000413725	LINC01554	Q52M75	96 aa		5.73	□□□□□ -1.49
SF1-206	ENST00000413725	PLAC4	Q8WY50	150 aa		5.69	□□□□□ -1.5
SF1-206	ENST00000413725	PRR15L	Q9BU68	103 aa		5.68	□□□□□ -1.5
SF1-206	ENST00000413725		A0A1B0GU33	70 aa		5.67	□□□□□ -1.5
SF1-206	ENST00000413725	LINC01558	Q9Y6Z2	57 aa		5.65	□□□□□ -1.5
SF1-206	ENST00000413725	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.65	□□□□□ -1.5
SF1-206	ENST00000413725	KRTAP13-4	Q3LI77	160 aa		5.64	□□□□□ -1.51
SF1-206	ENST00000413725	MACF1	Q9UPN3	7388 aa	Known RBP	5.64	□□□□□ -1.51
SF1-206	ENST00000413725		A6NN06	94 aa		5.63	□□□□□ -1.51
SF1-206	ENST00000413725	RPS28	P62857	69 aa	Known RBP	5.61	□□□□□ -1.51
SF1-206	ENST00000413725	KRTAP10-5	P60370	271 aa		5.6	□□□□□ -1.51
SF1-206	ENST00000413725	SPATA8	Q6RVD6	105 aa		5.58	□□□□□ -1.52
SF1-206	ENST00000413725	PRO2289	Q9P1D8	64 aa		5.56	□□□□□ -1.52
SF1-206	ENST00000413725		V9GYY9	64 aa		5.56	□□□□□ -1.52
SF1-206	ENST00000413725	SYNE2	Q8WXH0	6885 aa	Known RBP	5.56	□□□□□ -1.52
SF1-206	ENST00000413725		A0A0D9SG42	100 aa		5.54	□□□□□ -1.52
SF1-206	ENST00000413725	SMIM26	A0A096LP01	95 aa		5.53	□□□□□ -1.52
SF1-206	ENST00000413725		Q1T7F1	81 aa		5.51	□□□□□ -1.53
SF1-206	ENST00000413725	MT1X	P80297	61 aa		5.5	□□□□□ -1.53
SF1-206	ENST00000413725	UQCR11	O14957	56 aa		5.47	□□□□□ -1.53
SF1-206	ENST00000413725	CAMK2N1	Q7Z7J9	78 aa		5.46	□□□□□ -1.54
SF1-206	ENST00000413725	SPINT4	Q6UDR6	99 aa		5.45	□□□□□ -1.54
SF1-206	ENST00000413725		A8MU10	97 aa		5.44	□□□□□ -1.54
SF1-206	ENST00000413725	PSPHP1	O15172	72 aa		5.44	□□□□□ -1.54
SF1-206	ENST00000413725	KRTAP12-1	P59990	96 aa		5.42	□□□□□ -1.54
SF1-206	ENST00000413725	KRTAP12-2	P59991	146 aa		5.38	□□□□□ -1.55
SF1-206	ENST00000413725	MIR22HG	Q0VDD5	57 aa		5.37	□□□□□ -1.55
SF1-206	ENST00000413725	KRTAP6-3	Q3LI67	103 aa		5.34	□□□□□ -1.55
SF1-206	ENST00000413725		A6NED7	52 aa		5.3	□□□□□ -1.56
SF1-206	ENST00000413725	KRTAP15-1	Q3LI76	137 aa		5.26	□□□□□ -1.57
SF1-206	ENST00000413725		K7ERS5	55 aa		5.25	□□□□□ -1.57
SF1-206	ENST00000413725	KRTAP10-7	P60409	375 aa	Predicted RBP	5.25	□□□□□ -1.57
SF1-206	ENST00000413725	KRTAP10-12	P60413	245 aa		5.23	□□□□□ -1.57
SF1-206	ENST00000413725	NEB	P20929	6669 aa		5.21	□□□□□ -1.58
SF1-206	ENST00000413725	KMT2D	O14686	5537 aa		5.18	□□□□□ -1.58
SF1-206	ENST00000413725	KRTAP8-1	Q8IUC2	63 aa		5.17	□□□□□ -1.58
SF1-206	ENST00000413725	C10orf95	Q9H7T3	257 aa		5.15	□□□□□ -1.59
SF1-206	ENST00000413725	KRTAP5-9	P26371	169 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms