RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 Q75L30 129 aa9.18□□□□□ -0.94
PTPRC-206ENST00000413409 MPLKIPQ8TAP9 179 aa9.18□□□□□ -0.94
PTPRC-206ENST00000413409 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
PTPRC-206ENST00000413409 ACYP2P14621 99 aa9.16□□□□□ -0.94
PTPRC-206ENST00000413409 A8MUN3 132 aa9.05□□□□□ -0.96
PTPRC-206ENST00000413409 MT1HP80294 61 aa9.03□□□□□ -0.96
PTPRC-206ENST00000413409 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.97
PTPRC-206ENST00000413409 RPL37P61927 97 aaKnown RBP9.02□□□□□ -0.97
PTPRC-206ENST00000413409 LINC01558Q9Y6Z2 57 aa9.02□□□□□ -0.97
PTPRC-206ENST00000413409 KRTAP19-2Q3LHN2 52 aa9.01□□□□□ -0.97
PTPRC-206ENST00000413409 XP32Q5T750 250 aa8.99□□□□□ -0.97
PTPRC-206ENST00000413409 SPINK7P58062 85 aa8.98□□□□□ -0.97
PTPRC-206ENST00000413409 PSPHP1O15172 72 aa8.97□□□□□ -0.97
PTPRC-206ENST00000413409 ATP11AUNQ6ZP68 121 aa8.97□□□□□ -0.97
PTPRC-206ENST00000413409 KRTAP10-6P60371 365 aaPredicted RBP8.96□□□□□ -0.98
PTPRC-206ENST00000413409 Q5VV11 94 aa8.95□□□□□ -0.98
PTPRC-206ENST00000413409 PRR15LQ9BU68 103 aa8.95□□□□□ -0.98
PTPRC-206ENST00000413409 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
PTPRC-206ENST00000413409 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
PTPRC-206ENST00000413409 USH2AO75445 5202 aa8.86□□□□□ -0.99
PTPRC-206ENST00000413409 LOC100996750A0A140TA64 210 aa8.85□□□□□ -0.99
PTPRC-206ENST00000413409 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
PTPRC-206ENST00000413409 KRTAP4-6Q9BYQ5 205 aa8.85□□□□□ -0.99
PTPRC-206ENST00000413409 PRO0628Q9UI54 55 aa8.84□□□□□ -0.99
PTPRC-206ENST00000413409 BRK1Q8WUW1 75 aa8.83□□□□□ -1
PTPRC-206ENST00000413409 SPTSSBQ8NFR3 76 aa8.82□□□□□ -1
PTPRC-206ENST00000413409 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
PTPRC-206ENST00000413409 FCGBPQ9Y6R7 5405 aaPredicted RBP8.81□□□□□ -1
PTPRC-206ENST00000413409 SVIPQ8NHG7 77 aa8.8□□□□□ -1
PTPRC-206ENST00000413409 FLGP20930 4061 aaPredicted RBP8.79□□□□□ -1
PTPRC-206ENST00000413409 A0A1B0GU69 56 aa8.74□□□□□ -1.01
PTPRC-206ENST00000413409 A6NED7 52 aa8.73□□□□□ -1.01
PTPRC-206ENST00000413409 SYNE2Q8WXH0 6885 aaKnown RBP8.71□□□□□ -1.01
PTPRC-206ENST00000413409 M0R2T5 61 aa8.7□□□□□ -1.02
PTPRC-206ENST00000413409 CDC42SE1Q9NRR8 79 aa8.66□□□□□ -1.02
PTPRC-206ENST00000413409 MACF1Q9UPN3 7388 aaKnown RBP8.62□□□□□ -1.03
PTPRC-206ENST00000413409 SEC61GP60059 68 aa8.61□□□□□ -1.03
PTPRC-206ENST00000413409 LCA10Q71F78 164 aa8.61□□□□□ -1.03
PTPRC-206ENST00000413409 H3BS24 57 aa8.58□□□□□ -1.04
PTPRC-206ENST00000413409 S4R3F8 94 aa8.55□□□□□ -1.04
PTPRC-206ENST00000413409 A8MU10 97 aa8.54□□□□□ -1.04
PTPRC-206ENST00000413409 UQCR11O14957 56 aa8.54□□□□□ -1.04
PTPRC-206ENST00000413409 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
PTPRC-206ENST00000413409 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
PTPRC-206ENST00000413409 KRTAP19-1Q8IUB9 90 aa8.53□□□□□ -1.04
PTPRC-206ENST00000413409 SPATA8Q6RVD6 105 aa8.51□□□□□ -1.05
PTPRC-206ENST00000413409 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
PTPRC-206ENST00000413409 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
PTPRC-206ENST00000413409 A0A1B0GU33 70 aa8.38□□□□□ -1.07
PTPRC-206ENST00000413409 PMAIP1Q13794 54 aa8.34□□□□□ -1.07
PTPRC-206ENST00000413409 A6NN06 94 aa8.32□□□□□ -1.08
PTPRC-206ENST00000413409 H0YAA0 97 aa8.31□□□□□ -1.08
PTPRC-206ENST00000413409 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
PTPRC-206ENST00000413409 KRTAP6-3Q3LI67 103 aa8.28□□□□□ -1.08
PTPRC-206ENST00000413409 NEBP20929 6669 aa8.26□□□□□ -1.09
PTPRC-206ENST00000413409 MT2AP02795 61 aa8.22□□□□□ -1.09
PTPRC-206ENST00000413409 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
PTPRC-206ENST00000413409 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
PTPRC-206ENST00000413409 MT1FP04733 61 aa8.16□□□□□ -1.1
PTPRC-206ENST00000413409 P0C880 135 aa8.16□□□□□ -1.1
PTPRC-206ENST00000413409 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
PTPRC-206ENST00000413409 KRTAP19-6Q3LI70 58 aa8.15□□□□□ -1.1
PTPRC-206ENST00000413409 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
PTPRC-206ENST00000413409 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
PTPRC-206ENST00000413409 MUC12Q9UKN1 5478 aa8.06□□□□□ -1.12
PTPRC-206ENST00000413409 K7ERS5 55 aa8.05□□□□□ -1.12
PTPRC-206ENST00000413409 M0QZ58 72 aa8.03□□□□□ -1.12
PTPRC-206ENST00000413409 KRTAP10-10P60014 251 aa8.03□□□□□ -1.12
PTPRC-206ENST00000413409 KRTAP20-1Q3LI63 56 aa8.03□□□□□ -1.12
PTPRC-206ENST00000413409 A0A0D9SG42 100 aa7.94□□□□□ -1.14
PTPRC-206ENST00000413409 R4GN34 69 aa7.86□□□□□ -1.15
PTPRC-206ENST00000413409 KRTAP4-12Q9BQ66 201 aa7.85□□□□□ -1.15
PTPRC-206ENST00000413409 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
PTPRC-206ENST00000413409 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
PTPRC-206ENST00000413409 PRAC1Q96KF2 57 aa7.78□□□□□ -1.16
PTPRC-206ENST00000413409 ROMO1P60602 79 aa7.77□□□□□ -1.17
PTPRC-206ENST00000413409 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
PTPRC-206ENST00000413409 MDN1Q9NU22 5596 aa7.74□□□□□ -1.17
PTPRC-206ENST00000413409 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
PTPRC-206ENST00000413409 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
PTPRC-206ENST00000413409 KMT2DO14686 5537 aa7.69□□□□□ -1.18
PTPRC-206ENST00000413409 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
PTPRC-206ENST00000413409 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
PTPRC-206ENST00000413409 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
PTPRC-206ENST00000413409 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
PTPRC-206ENST00000413409 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.19
PTPRC-206ENST00000413409 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
PTPRC-206ENST00000413409 KRTAP5-9P26371 169 aa7.56□□□□□ -1.2
PTPRC-206ENST00000413409 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.2
PTPRC-206ENST00000413409 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
PTPRC-206ENST00000413409 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
PTPRC-206ENST00000413409 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
PTPRC-206ENST00000413409 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
PTPRC-206ENST00000413409 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
PTPRC-206ENST00000413409 GPR98Q8WXG9 6306 aa7.33□□□□□ -1.24
PTPRC-206ENST00000413409 KRTAP2-2Q9BYT5 123 aa7.31□□□□□ -1.24
PTPRC-206ENST00000413409 KRTAP2-1Q9BYU5 128 aa7.31□□□□□ -1.24
PTPRC-206ENST00000413409 MT1BP07438 61 aa7.28□□□□□ -1.24
PTPRC-206ENST00000413409 PLAC4Q8WY50 150 aa7.27□□□□□ -1.24
PTPRC-206ENST00000413409 KRTAP19-8Q3LI54 63 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms