RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 H7BZZ5 65 aa3.5□□□□□ -1.85
VPS41-204ENST00000413141 PCOTHQ58A44 107 aa3.5□□□□□ -1.85
VPS41-204ENST00000413141 CYP4F30PQ9H0H9 118 aa3.5□□□□□ -1.85
VPS41-204ENST00000413141 SPINK7P58062 85 aa3.48□□□□□ -1.85
VPS41-204ENST00000413141 SEC61BP60468 96 aaKnown RBP3.48□□□□□ -1.85
VPS41-204ENST00000413141 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
VPS41-204ENST00000413141 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
VPS41-204ENST00000413141 TMEM258P61165 79 aa3.47□□□□□ -1.85
VPS41-204ENST00000413141 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
VPS41-204ENST00000413141 HRES1P13985 223 aa3.46□□□□□ -1.86
VPS41-204ENST00000413141 FAM236DA0A1B0GTK5 79 aa3.45□□□□□ -1.86
VPS41-204ENST00000413141 FAM236CP0DP71 79 aa3.45□□□□□ -1.86
VPS41-204ENST00000413141 SPANXA2-OT1Q8N9U9 137 aa3.45□□□□□ -1.86
VPS41-204ENST00000413141 ATP5EP56381 51 aaPredicted RBP3.44□□□□□ -1.86
VPS41-204ENST00000413141 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
VPS41-204ENST00000413141 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
VPS41-204ENST00000413141 DMAC1Q96GE9 116 aa3.41□□□□□ -1.86
VPS41-204ENST00000413141 MPLKIPQ8TAP9 179 aa3.39□□□□□ -1.87
VPS41-204ENST00000413141 UBR4Q5T4S7 5183 aa3.39□□□□□ -1.87
VPS41-204ENST00000413141 A8MUN3 132 aa3.38□□□□□ -1.87
VPS41-204ENST00000413141 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
VPS41-204ENST00000413141 KRTAP3-1Q9BYR8 98 aa3.38□□□□□ -1.87
VPS41-204ENST00000413141 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
VPS41-204ENST00000413141 ACYP2P14621 99 aa3.35□□□□□ -1.87
VPS41-204ENST00000413141 COA5Q86WW8 74 aa3.35□□□□□ -1.87
VPS41-204ENST00000413141 SERP1Q9Y6X1 66 aa3.35□□□□□ -1.87
VPS41-204ENST00000413141 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
VPS41-204ENST00000413141 MUC2Q02817 5179 aa3.33□□□□□ -1.88
VPS41-204ENST00000413141 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
VPS41-204ENST00000413141 H1FX-AS1Q4G0G2 97 aa3.32□□□□□ -1.88
VPS41-204ENST00000413141 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
VPS41-204ENST00000413141 CHKB-CPT1BH3BT56 60 aa3.31□□□□□ -1.88
VPS41-204ENST00000413141 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
VPS41-204ENST00000413141 S4R3F8 94 aa3.29□□□□□ -1.88
VPS41-204ENST00000413141 LCA10Q71F78 164 aa3.28□□□□□ -1.88
VPS41-204ENST00000413141 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
VPS41-204ENST00000413141 SMIM26A0A096LP01 95 aa3.24□□□□□ -1.89
VPS41-204ENST00000413141 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
VPS41-204ENST00000413141 FAT4Q6V0I7 4981 aa3.22□□□□□ -1.89
VPS41-204ENST00000413141 MT1HP80294 61 aa3.2□□□□□ -1.9
VPS41-204ENST00000413141 Q1T7F1 81 aa3.2□□□□□ -1.9
VPS41-204ENST00000413141 CSAG1Q6PB30 78 aa3.2□□□□□ -1.9
VPS41-204ENST00000413141 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
VPS41-204ENST00000413141 V9GYY9 64 aa3.19□□□□□ -1.9
VPS41-204ENST00000413141 A0A1B0GU69 56 aa3.16□□□□□ -1.9
VPS41-204ENST00000413141 PRR15LQ9BU68 103 aa3.16□□□□□ -1.9
VPS41-204ENST00000413141 H0YAA0 97 aa3.15□□□□□ -1.91
VPS41-204ENST00000413141 M0R2T5 61 aa3.15□□□□□ -1.91
VPS41-204ENST00000413141 PSPHP1O15172 72 aa3.14□□□□□ -1.91
VPS41-204ENST00000413141 SEC61GP60059 68 aa3.14□□□□□ -1.91
VPS41-204ENST00000413141 Q5VV11 94 aa3.13□□□□□ -1.91
VPS41-204ENST00000413141 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
VPS41-204ENST00000413141 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
VPS41-204ENST00000413141 P0C880 135 aa3.11□□□□□ -1.91
VPS41-204ENST00000413141 SVIPQ8NHG7 77 aa3.08□□□□□ -1.92
VPS41-204ENST00000413141 A0A1B0GU33 70 aa3.07□□□□□ -1.92
VPS41-204ENST00000413141 MT2AP02795 61 aa3.07□□□□□ -1.92
VPS41-204ENST00000413141 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
VPS41-204ENST00000413141 A6NED7 52 aa3.05□□□□□ -1.92
VPS41-204ENST00000413141 UQCR11O14957 56 aa3.05□□□□□ -1.92
VPS41-204ENST00000413141 MT1FP04733 61 aa3.05□□□□□ -1.92
VPS41-204ENST00000413141 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
VPS41-204ENST00000413141 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
VPS41-204ENST00000413141 M0QZ58 72 aa3.02□□□□□ -1.93
VPS41-204ENST00000413141 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
VPS41-204ENST00000413141 MIR22HGQ0VDD5 57 aa3.02□□□□□ -1.93
VPS41-204ENST00000413141 CRIPTQ9P021 101 aa3.02□□□□□ -1.93
VPS41-204ENST00000413141 R4GN34 69 aa3.02□□□□□ -1.93
VPS41-204ENST00000413141 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
VPS41-204ENST00000413141 A8MU10 97 aa2.98□□□□□ -1.93
VPS41-204ENST00000413141 BRK1Q8WUW1 75 aa2.98□□□□□ -1.93
VPS41-204ENST00000413141 SPRR2GQ9BYE4 73 aa2.98□□□□□ -1.93
VPS41-204ENST00000413141 A0A0D9SG42 100 aa2.97□□□□□ -1.93
VPS41-204ENST00000413141 LINC01554Q52M75 96 aa2.96□□□□□ -1.94
VPS41-204ENST00000413141 A6NN06 94 aa2.92□□□□□ -1.94
VPS41-204ENST00000413141 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
VPS41-204ENST00000413141 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
VPS41-204ENST00000413141 KRTAP19-8Q3LI54 63 aa2.91□□□□□ -1.94
VPS41-204ENST00000413141 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
VPS41-204ENST00000413141 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
VPS41-204ENST00000413141 K7ERS5 55 aa2.88□□□□□ -1.95
VPS41-204ENST00000413141 MT1BP07438 61 aa2.87□□□□□ -1.95
VPS41-204ENST00000413141 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
VPS41-204ENST00000413141 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
VPS41-204ENST00000413141 USH2AO75445 5202 aa2.81□□□□□ -1.96
VPS41-204ENST00000413141 PMAIP1Q13794 54 aa2.8□□□□□ -1.96
VPS41-204ENST00000413141 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
VPS41-204ENST00000413141 KRTAP10-5P60370 271 aa2.77□□□□□ -1.97
VPS41-204ENST00000413141 MT1XP80297 61 aa2.77□□□□□ -1.97
VPS41-204ENST00000413141 ROMO1P60602 79 aa2.76□□□□□ -1.97
VPS41-204ENST00000413141 C10orf95Q9H7T3 257 aa2.76□□□□□ -1.97
VPS41-204ENST00000413141 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
VPS41-204ENST00000413141 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
VPS41-204ENST00000413141 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
VPS41-204ENST00000413141 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
VPS41-204ENST00000413141 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
VPS41-204ENST00000413141 TNP1P09430 55 aa2.68□□□□□ -1.98
VPS41-204ENST00000413141 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
VPS41-204ENST00000413141 KRTAP10-7P60409 375 aaPredicted RBP2.65□□□□□ -1.99
VPS41-204ENST00000413141 PRAC1Q96KF2 57 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms