RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 H7BZZ5 65 aa5.25□□□□□ -1.57
SMARCAL1-204ENST00000412913 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
SMARCAL1-204ENST00000412913 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
SMARCAL1-204ENST00000412913 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
SMARCAL1-204ENST00000412913 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
SMARCAL1-204ENST00000412913 MT1HP80294 61 aa5.22□□□□□ -1.57
SMARCAL1-204ENST00000412913 DMAC1Q96GE9 116 aa5.22□□□□□ -1.57
SMARCAL1-204ENST00000412913 NDUFC1O43677 76 aa5.21□□□□□ -1.58
SMARCAL1-204ENST00000412913 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
SMARCAL1-204ENST00000412913 H1FX-AS1Q4G0G2 97 aa5.2□□□□□ -1.58
SMARCAL1-204ENST00000412913 A8MUN3 132 aa5.19□□□□□ -1.58
SMARCAL1-204ENST00000412913 PCP4P48539 62 aa5.18□□□□□ -1.58
SMARCAL1-204ENST00000412913 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
SMARCAL1-204ENST00000412913 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
SMARCAL1-204ENST00000412913 LCA10Q71F78 164 aa5.13□□□□□ -1.59
SMARCAL1-204ENST00000412913 S4R3F8 94 aa5.13□□□□□ -1.59
SMARCAL1-204ENST00000412913 H3BS24 57 aa5.1□□□□□ -1.59
SMARCAL1-204ENST00000412913 TMEM258P61165 79 aa5.1□□□□□ -1.59
SMARCAL1-204ENST00000412913 ACYP2P14621 99 aa5.09□□□□□ -1.59
SMARCAL1-204ENST00000412913 ATP5EP56381 51 aaPredicted RBP5.08□□□□□ -1.6
SMARCAL1-204ENST00000412913 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
SMARCAL1-204ENST00000412913 COA5Q86WW8 74 aa5.05□□□□□ -1.6
SMARCAL1-204ENST00000412913 M0R2T5 61 aa5.04□□□□□ -1.6
SMARCAL1-204ENST00000412913 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
SMARCAL1-204ENST00000412913 CSAG1Q6PB30 78 aa5□□□□□ -1.61
SMARCAL1-204ENST00000412913 CHKB-CPT1BH3BT56 60 aa4.99□□□□□ -1.61
SMARCAL1-204ENST00000412913 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
SMARCAL1-204ENST00000412913 MT2AP02795 61 aa4.96□□□□□ -1.62
SMARCAL1-204ENST00000412913 MT1FP04733 61 aa4.94□□□□□ -1.62
SMARCAL1-204ENST00000412913 SERP1Q9Y6X1 66 aa4.94□□□□□ -1.62
SMARCAL1-204ENST00000412913 H0YAA0 97 aa4.93□□□□□ -1.62
SMARCAL1-204ENST00000412913 SPTSSBQ8NFR3 76 aa4.92□□□□□ -1.62
SMARCAL1-204ENST00000412913 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
SMARCAL1-204ENST00000412913 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
SMARCAL1-204ENST00000412913 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
SMARCAL1-204ENST00000412913 P0C880 135 aa4.85□□□□□ -1.63
SMARCAL1-204ENST00000412913 KRTAP10-10P60014 251 aa4.84□□□□□ -1.63
SMARCAL1-204ENST00000412913 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
SMARCAL1-204ENST00000412913 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
SMARCAL1-204ENST00000412913 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
SMARCAL1-204ENST00000412913 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
SMARCAL1-204ENST00000412913 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
SMARCAL1-204ENST00000412913 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
SMARCAL1-204ENST00000412913 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
SMARCAL1-204ENST00000412913 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
SMARCAL1-204ENST00000412913 A0A1B0GU69 56 aa4.74□□□□□ -1.65
SMARCAL1-204ENST00000412913 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
SMARCAL1-204ENST00000412913 Q1T7F1 81 aa4.73□□□□□ -1.65
SMARCAL1-204ENST00000412913 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
SMARCAL1-204ENST00000412913 SEC61GP60059 68 aa4.72□□□□□ -1.65
SMARCAL1-204ENST00000412913 KRTAP13-4Q3LI77 160 aa4.72□□□□□ -1.65
SMARCAL1-204ENST00000412913 USH2AO75445 5202 aa4.69□□□□□ -1.66
SMARCAL1-204ENST00000412913 M0QZ58 72 aa4.69□□□□□ -1.66
SMARCAL1-204ENST00000412913 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
SMARCAL1-204ENST00000412913 R4GN34 69 aa4.69□□□□□ -1.66
SMARCAL1-204ENST00000412913 V9GYY9 64 aa4.69□□□□□ -1.66
SMARCAL1-204ENST00000412913 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
SMARCAL1-204ENST00000412913 A0A1B0GU33 70 aa4.66□□□□□ -1.66
SMARCAL1-204ENST00000412913 PSPHP1O15172 72 aa4.65□□□□□ -1.67
SMARCAL1-204ENST00000412913 Q5VV11 94 aa4.65□□□□□ -1.67
SMARCAL1-204ENST00000412913 MT1BP07438 61 aa4.64□□□□□ -1.67
SMARCAL1-204ENST00000412913 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
SMARCAL1-204ENST00000412913 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
SMARCAL1-204ENST00000412913 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
SMARCAL1-204ENST00000412913 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
SMARCAL1-204ENST00000412913 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SMARCAL1-204ENST00000412913 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
SMARCAL1-204ENST00000412913 UQCR11O14957 56 aa4.56□□□□□ -1.68
SMARCAL1-204ENST00000412913 A6NN06 94 aa4.55□□□□□ -1.68
SMARCAL1-204ENST00000412913 A8MU10 97 aa4.55□□□□□ -1.68
SMARCAL1-204ENST00000412913 A0A0D9SG42 100 aa4.53□□□□□ -1.68
SMARCAL1-204ENST00000412913 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
SMARCAL1-204ENST00000412913 MIR22HGQ0VDD5 57 aa4.5□□□□□ -1.69
SMARCAL1-204ENST00000412913 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
SMARCAL1-204ENST00000412913 A6NED7 52 aa4.48□□□□□ -1.69
SMARCAL1-204ENST00000412913 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
SMARCAL1-204ENST00000412913 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
SMARCAL1-204ENST00000412913 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
SMARCAL1-204ENST00000412913 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
SMARCAL1-204ENST00000412913 MT1XP80297 61 aa4.44□□□□□ -1.7
SMARCAL1-204ENST00000412913 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
SMARCAL1-204ENST00000412913 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
SMARCAL1-204ENST00000412913 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
SMARCAL1-204ENST00000412913 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.71
SMARCAL1-204ENST00000412913 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
SMARCAL1-204ENST00000412913 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
SMARCAL1-204ENST00000412913 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
SMARCAL1-204ENST00000412913 K7ERS5 55 aa4.27□□□□□ -1.73
SMARCAL1-204ENST00000412913 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
SMARCAL1-204ENST00000412913 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
SMARCAL1-204ENST00000412913 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
SMARCAL1-204ENST00000412913 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
SMARCAL1-204ENST00000412913 KMT2DO14686 5537 aa4.17□□□□□ -1.74
SMARCAL1-204ENST00000412913 TNP1P09430 55 aa4.12□□□□□ -1.75
SMARCAL1-204ENST00000412913 ROMO1P60602 79 aa4.12□□□□□ -1.75
SMARCAL1-204ENST00000412913 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
SMARCAL1-204ENST00000412913 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
SMARCAL1-204ENST00000412913 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
SMARCAL1-204ENST00000412913 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
SMARCAL1-204ENST00000412913 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms