RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 H7BZZ5 65 aa9.19□□□□□ -0.94
CDC42-204ENST00000411827 ACYP2P14621 99 aa9.17□□□□□ -0.94
CDC42-204ENST00000411827 S4R3F8 94 aa9.15□□□□□ -0.94
CDC42-204ENST00000411827 M0R2T5 61 aa9.14□□□□□ -0.95
CDC42-204ENST00000411827 FLGP20930 4061 aaPredicted RBP9.11□□□□□ -0.95
CDC42-204ENST00000411827 CYSTM1Q9H1C7 97 aa9.1□□□□□ -0.95
CDC42-204ENST00000411827 ATP5EP56381 51 aaPredicted RBP9.08□□□□□ -0.96
CDC42-204ENST00000411827 CSAG1Q6PB30 78 aa9.06□□□□□ -0.96
CDC42-204ENST00000411827 KRTAP9-6A0A140TA67 174 aa9.05□□□□□ -0.96
CDC42-204ENST00000411827 LCA10Q71F78 164 aa9.05□□□□□ -0.96
CDC42-204ENST00000411827 PCP4P48539 62 aa9.03□□□□□ -0.96
CDC42-204ENST00000411827 TMEM258P61165 79 aa9.03□□□□□ -0.96
CDC42-204ENST00000411827 SPTSSBQ8NFR3 76 aa9.01□□□□□ -0.97
CDC42-204ENST00000411827 CHKB-CPT1BH3BT56 60 aa8.99□□□□□ -0.97
CDC42-204ENST00000411827 LOC100996750A0A140TA64 210 aa8.96□□□□□ -0.98
CDC42-204ENST00000411827 KRTAP4-6Q9BYQ5 205 aa8.96□□□□□ -0.98
CDC42-204ENST00000411827 KRTAP10-6P60371 365 aaPredicted RBP8.94□□□□□ -0.98
CDC42-204ENST00000411827 COA5Q86WW8 74 aa8.9□□□□□ -0.98
CDC42-204ENST00000411827 FSIP2Q5CZC0 6907 aa8.86□□□□□ -0.99
CDC42-204ENST00000411827 H0YAA0 97 aa8.85□□□□□ -0.99
CDC42-204ENST00000411827 KRTAP9-8Q9BYQ0 159 aa8.8□□□□□ -1
CDC42-204ENST00000411827 CRCT1Q9UGL9 99 aa8.76□□□□□ -1.01
CDC42-204ENST00000411827 MT2AP02795 61 aa8.73□□□□□ -1.01
CDC42-204ENST00000411827 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
CDC42-204ENST00000411827 KRTAP10-10P60014 251 aa8.71□□□□□ -1.02
CDC42-204ENST00000411827 CRIPTQ9P021 101 aa8.66□□□□□ -1.02
CDC42-204ENST00000411827 ADM2Q7Z4H4 148 aa8.65□□□□□ -1.02
CDC42-204ENST00000411827 MT1FP04733 61 aa8.64□□□□□ -1.03
CDC42-204ENST00000411827 SEC61GP60059 68 aa8.64□□□□□ -1.03
CDC42-204ENST00000411827 RPS28P62857 69 aaKnown RBP8.59□□□□□ -1.03
CDC42-204ENST00000411827 H3BS24 57 aa8.56□□□□□ -1.04
CDC42-204ENST00000411827 KRTAP9-3Q9BYQ3 159 aa8.52□□□□□ -1.05
CDC42-204ENST00000411827 P0C880 135 aa8.5□□□□□ -1.05
CDC42-204ENST00000411827 USH2AO75445 5202 aa8.49□□□□□ -1.05
CDC42-204ENST00000411827 SSPOA2VEC9 5147 aa8.49□□□□□ -1.05
CDC42-204ENST00000411827 A0A1B0GU69 56 aa8.49□□□□□ -1.05
CDC42-204ENST00000411827 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
CDC42-204ENST00000411827 V9GYY9 64 aa8.49□□□□□ -1.05
CDC42-204ENST00000411827 LINC01558Q9Y6Z2 57 aa8.48□□□□□ -1.05
CDC42-204ENST00000411827 SMIM26A0A096LP01 95 aa8.47□□□□□ -1.05
CDC42-204ENST00000411827 SPRR2GQ9BYE4 73 aa8.45□□□□□ -1.06
CDC42-204ENST00000411827 R4GN34 69 aa8.45□□□□□ -1.06
CDC42-204ENST00000411827 M0QZ58 72 aa8.44□□□□□ -1.06
CDC42-204ENST00000411827 Q1T7F1 81 aa8.38□□□□□ -1.07
CDC42-204ENST00000411827 KRTAP19-1Q8IUB9 90 aa8.38□□□□□ -1.07
CDC42-204ENST00000411827 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
CDC42-204ENST00000411827 A0A1B0GU33 70 aa8.35□□□□□ -1.07
CDC42-204ENST00000411827 Q5VV11 94 aa8.33□□□□□ -1.08
CDC42-204ENST00000411827 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
CDC42-204ENST00000411827 FCGBPQ9Y6R7 5405 aaPredicted RBP8.23□□□□□ -1.09
CDC42-204ENST00000411827 A6NN06 94 aa8.19□□□□□ -1.1
CDC42-204ENST00000411827 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
CDC42-204ENST00000411827 UQCR11O14957 56 aa8.19□□□□□ -1.1
CDC42-204ENST00000411827 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
CDC42-204ENST00000411827 PSPHP1O15172 72 aa8.16□□□□□ -1.1
CDC42-204ENST00000411827 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
CDC42-204ENST00000411827 KRTAP4-12Q9BQ66 201 aa8.14□□□□□ -1.11
CDC42-204ENST00000411827 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
CDC42-204ENST00000411827 KRTAP9-7A8MTY7 169 aa8.12□□□□□ -1.11
CDC42-204ENST00000411827 MT1BP07438 61 aa8.11□□□□□ -1.11
CDC42-204ENST00000411827 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
CDC42-204ENST00000411827 MIR22HGQ0VDD5 57 aa8.02□□□□□ -1.13
CDC42-204ENST00000411827 LCE3BQ5TA77 95 aa8.02□□□□□ -1.13
CDC42-204ENST00000411827 A0A0D9SG42 100 aa8.01□□□□□ -1.13
CDC42-204ENST00000411827 A6NED7 52 aa7.99□□□□□ -1.13
CDC42-204ENST00000411827 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
CDC42-204ENST00000411827 KRTAP19-6Q3LI70 58 aa7.98□□□□□ -1.13
CDC42-204ENST00000411827 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
CDC42-204ENST00000411827 A8MU10 97 aa7.92□□□□□ -1.14
CDC42-204ENST00000411827 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
CDC42-204ENST00000411827 SPINT4Q6UDR6 99 aa7.89□□□□□ -1.15
CDC42-204ENST00000411827 MACF1Q9UPN3 7388 aaKnown RBP7.87□□□□□ -1.15
CDC42-204ENST00000411827 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
CDC42-204ENST00000411827 K7ERS5 55 aa7.86□□□□□ -1.15
CDC42-204ENST00000411827 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
CDC42-204ENST00000411827 SYNE2Q8WXH0 6885 aaKnown RBP7.83□□□□□ -1.16
CDC42-204ENST00000411827 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
CDC42-204ENST00000411827 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
CDC42-204ENST00000411827 KRTAP9-9Q9BYP9 154 aa7.78□□□□□ -1.16
CDC42-204ENST00000411827 KRTAP9-4Q9BYQ2 154 aa7.78□□□□□ -1.16
CDC42-204ENST00000411827 MT1XP80297 61 aa7.77□□□□□ -1.17
CDC42-204ENST00000411827 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
CDC42-204ENST00000411827 KRTAP6-3Q3LI67 103 aa7.57□□□□□ -1.2
CDC42-204ENST00000411827 BRK1Q8WUW1 75 aa7.56□□□□□ -1.2
CDC42-204ENST00000411827 LCE4AQ5TA78 99 aa7.53□□□□□ -1.2
CDC42-204ENST00000411827 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
CDC42-204ENST00000411827 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
CDC42-204ENST00000411827 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
CDC42-204ENST00000411827 TNP1P09430 55 aa7.45□□□□□ -1.22
CDC42-204ENST00000411827 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
CDC42-204ENST00000411827 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
CDC42-204ENST00000411827 NEBP20929 6669 aa7.39□□□□□ -1.23
CDC42-204ENST00000411827 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
CDC42-204ENST00000411827 ROMO1P60602 79 aa7.36□□□□□ -1.23
CDC42-204ENST00000411827 KRTAP4-7Q9BYR0 210 aa7.33□□□□□ -1.24
CDC42-204ENST00000411827 KMT2DO14686 5537 aa7.26□□□□□ -1.25
CDC42-204ENST00000411827 PRO0628Q9UI54 55 aa7.26□□□□□ -1.25
CDC42-204ENST00000411827 MDN1Q9NU22 5596 aa7.25□□□□□ -1.25
CDC42-204ENST00000411827 SVIPQ8NHG7 77 aa7.24□□□□□ -1.25
CDC42-204ENST00000411827 KRTAP4-9Q9BYQ8 210 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms