RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 CRCT1Q9UGL9 99 aa9.97□□□□□ -0.81
C4orf48-201ENST00000409248 KRTAP10-10P60014 251 aa9.96□□□□□ -0.82
C4orf48-201ENST00000409248 DMAC1Q96GE9 116 aa9.94□□□□□ -0.82
C4orf48-201ENST00000409248 LCA10Q71F78 164 aa9.93□□□□□ -0.82
C4orf48-201ENST00000409248 FSIP2Q5CZC0 6907 aa9.93□□□□□ -0.82
C4orf48-201ENST00000409248 CSAG1Q6PB30 78 aa9.87□□□□□ -0.83
C4orf48-201ENST00000409248 SPANXA2-OT1Q8N9U9 137 aa9.87□□□□□ -0.83
C4orf48-201ENST00000409248 NDUFC1O43677 76 aa9.86□□□□□ -0.83
C4orf48-201ENST00000409248 ACYP2P14621 99 aa9.82□□□□□ -0.84
C4orf48-201ENST00000409248 KRTAP9-3Q9BYQ3 159 aa9.82□□□□□ -0.84
C4orf48-201ENST00000409248 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
C4orf48-201ENST00000409248 CCDC179H3BU77 68 aa9.78□□□□□ -0.84
C4orf48-201ENST00000409248 CYSTM1Q9H1C7 97 aa9.77□□□□□ -0.85
C4orf48-201ENST00000409248 H7BZZ5 65 aa9.76□□□□□ -0.85
C4orf48-201ENST00000409248 LCE2BO14633 110 aa9.71□□□□□ -0.86
C4orf48-201ENST00000409248 CHKB-CPT1BH3BT56 60 aa9.68□□□□□ -0.86
C4orf48-201ENST00000409248 USH2AO75445 5202 aa9.66□□□□□ -0.86
C4orf48-201ENST00000409248 SPTSSBQ8NFR3 76 aa9.62□□□□□ -0.87
C4orf48-201ENST00000409248 H0YAA0 97 aa9.57□□□□□ -0.88
C4orf48-201ENST00000409248 COA5Q86WW8 74 aa9.56□□□□□ -0.88
C4orf48-201ENST00000409248 ATP5EP56381 51 aaPredicted RBP9.53□□□□□ -0.88
C4orf48-201ENST00000409248 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
C4orf48-201ENST00000409248 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
C4orf48-201ENST00000409248 TMEM258P61165 79 aa9.48□□□□□ -0.89
C4orf48-201ENST00000409248 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
C4orf48-201ENST00000409248 CRIPTQ9P021 101 aa9.39□□□□□ -0.91
C4orf48-201ENST00000409248 KRTAP19-6Q3LI70 58 aa9.38□□□□□ -0.91
C4orf48-201ENST00000409248 PCP4P48539 62 aa9.36□□□□□ -0.91
C4orf48-201ENST00000409248 SPRR2GQ9BYE4 73 aa9.36□□□□□ -0.91
C4orf48-201ENST00000409248 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
C4orf48-201ENST00000409248 P0C880 135 aa9.32□□□□□ -0.92
C4orf48-201ENST00000409248 FCGBPQ9Y6R7 5405 aaPredicted RBP9.3□□□□□ -0.92
C4orf48-201ENST00000409248 Q5VV11 94 aa9.28□□□□□ -0.92
C4orf48-201ENST00000409248 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.27□□□□□ -0.93
C4orf48-201ENST00000409248 KRTAP19-8Q3LI54 63 aa9.26□□□□□ -0.93
C4orf48-201ENST00000409248 SEC61GP60059 68 aa9.22□□□□□ -0.93
C4orf48-201ENST00000409248 R4GN34 69 aa9.22□□□□□ -0.93
C4orf48-201ENST00000409248 MT1BP07438 61 aa9.21□□□□□ -0.94
C4orf48-201ENST00000409248 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
C4orf48-201ENST00000409248 M0QZ58 72 aa9.17□□□□□ -0.94
C4orf48-201ENST00000409248 KRTAP9-7A8MTY7 169 aa9.09□□□□□ -0.95
C4orf48-201ENST00000409248 A0A1B0GU69 56 aa9.08□□□□□ -0.96
C4orf48-201ENST00000409248 A6NN06 94 aa9.06□□□□□ -0.96
C4orf48-201ENST00000409248 MACF1Q9UPN3 7388 aaKnown RBP9.01□□□□□ -0.97
C4orf48-201ENST00000409248 LINC01554Q52M75 96 aa9□□□□□ -0.97
C4orf48-201ENST00000409248 PRR15LQ9BU68 103 aa9□□□□□ -0.97
C4orf48-201ENST00000409248 LINC01558Q9Y6Z2 57 aa9□□□□□ -0.97
C4orf48-201ENST00000409248 KRTAP10-5P60370 271 aa8.98□□□□□ -0.97
C4orf48-201ENST00000409248 A0A1B0GU33 70 aa8.97□□□□□ -0.97
C4orf48-201ENST00000409248 KRTAP13-4Q3LI77 160 aa8.93□□□□□ -0.98
C4orf48-201ENST00000409248 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
C4orf48-201ENST00000409248 V9GYY9 64 aa8.87□□□□□ -0.99
C4orf48-201ENST00000409248 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
C4orf48-201ENST00000409248 SMIM26A0A096LP01 95 aa8.85□□□□□ -0.99
C4orf48-201ENST00000409248 SPATA8Q6RVD6 105 aa8.84□□□□□ -0.99
C4orf48-201ENST00000409248 SYNE2Q8WXH0 6885 aaKnown RBP8.81□□□□□ -1
C4orf48-201ENST00000409248 Q1T7F1 81 aa8.8□□□□□ -1
C4orf48-201ENST00000409248 PRO2289Q9P1D8 64 aa8.8□□□□□ -1
C4orf48-201ENST00000409248 A0A0D9SG42 100 aa8.76□□□□□ -1.01
C4orf48-201ENST00000409248 KRTAP6-3Q3LI67 103 aa8.75□□□□□ -1.01
C4orf48-201ENST00000409248 MT1XP80297 61 aa8.7□□□□□ -1.02
C4orf48-201ENST00000409248 UQCR11O14957 56 aa8.69□□□□□ -1.02
C4orf48-201ENST00000409248 PSPHP1O15172 72 aa8.69□□□□□ -1.02
C4orf48-201ENST00000409248 A8MU10 97 aa8.62□□□□□ -1.03
C4orf48-201ENST00000409248 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
C4orf48-201ENST00000409248 CAMK2N1Q7Z7J9 78 aa8.58□□□□□ -1.04
C4orf48-201ENST00000409248 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
C4orf48-201ENST00000409248 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
C4orf48-201ENST00000409248 KRTAP12-2P59991 146 aa8.52□□□□□ -1.05
C4orf48-201ENST00000409248 A6NED7 52 aa8.46□□□□□ -1.06
C4orf48-201ENST00000409248 KRTAP5-9P26371 169 aa8.45□□□□□ -1.06
C4orf48-201ENST00000409248 KRTAP8-1Q8IUC2 63 aa8.33□□□□□ -1.08
C4orf48-201ENST00000409248 K7ERS5 55 aa8.31□□□□□ -1.08
C4orf48-201ENST00000409248 NEBP20929 6669 aa8.3□□□□□ -1.08
C4orf48-201ENST00000409248 KRTAP10-7P60409 375 aaPredicted RBP8.29□□□□□ -1.08
C4orf48-201ENST00000409248 MUC12Q9UKN1 5478 aa8.27□□□□□ -1.09
C4orf48-201ENST00000409248 KRTAP10-12P60413 245 aa8.27□□□□□ -1.09
C4orf48-201ENST00000409248 SPRR2FQ96RM1 72 aa8.27□□□□□ -1.09
C4orf48-201ENST00000409248 KMT2DO14686 5537 aa8.27□□□□□ -1.09
C4orf48-201ENST00000409248 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
C4orf48-201ENST00000409248 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
C4orf48-201ENST00000409248 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
C4orf48-201ENST00000409248 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
C4orf48-201ENST00000409248 MDN1Q9NU22 5596 aa8.1□□□□□ -1.11
C4orf48-201ENST00000409248 SPRR2EP22531 72 aa8.1□□□□□ -1.11
C4orf48-201ENST00000409248 SPRR2BP35325 72 aa8.1□□□□□ -1.11
C4orf48-201ENST00000409248 SPRR2AP35326 72 aa8.1□□□□□ -1.11
C4orf48-201ENST00000409248 TNP1P09430 55 aa8.05□□□□□ -1.12
C4orf48-201ENST00000409248 KRTAP20-1Q3LI63 56 aa8.02□□□□□ -1.13
C4orf48-201ENST00000409248 LCE1AQ5T7P2 110 aa7.99□□□□□ -1.13
C4orf48-201ENST00000409248 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
C4orf48-201ENST00000409248 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
C4orf48-201ENST00000409248 KRTAP2-3P0C7H8 128 aa7.85□□□□□ -1.15
C4orf48-201ENST00000409248 KRTAP2-4Q9BYR9 128 aa7.85□□□□□ -1.15
C4orf48-201ENST00000409248 SPRR2DP22532 72 aa7.83□□□□□ -1.16
C4orf48-201ENST00000409248 ROMO1P60602 79 aa7.82□□□□□ -1.16
C4orf48-201ENST00000409248 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
C4orf48-201ENST00000409248 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
C4orf48-201ENST00000409248 MT1EP04732 61 aa7.7□□□□□ -1.18
C4orf48-201ENST00000409248 KRTAP19-5Q3LI72 72 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms