RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 PRO0628Q9UI54 55 aa8.32□□□□□ -1.08
PARVB-204ENST00000406477 A6NED7 52 aa8.3□□□□□ -1.08
PARVB-204ENST00000406477 SEC61GP60059 68 aa8.3□□□□□ -1.08
PARVB-204ENST00000406477 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
PARVB-204ENST00000406477 KRTAP3-2Q9BYR7 98 aa8.3□□□□□ -1.08
PARVB-204ENST00000406477 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
PARVB-204ENST00000406477 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
PARVB-204ENST00000406477 S4R3F8 94 aa8.21□□□□□ -1.1
PARVB-204ENST00000406477 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
PARVB-204ENST00000406477 UQCR11O14957 56 aa8.16□□□□□ -1.1
PARVB-204ENST00000406477 LCA10Q71F78 164 aa8.15□□□□□ -1.1
PARVB-204ENST00000406477 LRP2P98164 4655 aa8.12□□□□□ -1.11
PARVB-204ENST00000406477 LPAP08519 4548 aa8.09□□□□□ -1.11
PARVB-204ENST00000406477 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
PARVB-204ENST00000406477 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
PARVB-204ENST00000406477 A0A1B0GU33 70 aa8.03□□□□□ -1.12
PARVB-204ENST00000406477 A8MU10 97 aa8.03□□□□□ -1.12
PARVB-204ENST00000406477 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
PARVB-204ENST00000406477 MUC17Q685J3 4493 aa7.98□□□□□ -1.13
PARVB-204ENST00000406477 KRTAP4-1Q9BYQ7 146 aa7.98□□□□□ -1.13
PARVB-204ENST00000406477 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
PARVB-204ENST00000406477 PMAIP1Q13794 54 aa7.93□□□□□ -1.14
PARVB-204ENST00000406477 KRTAP10-6P60371 365 aaPredicted RBP7.91□□□□□ -1.14
PARVB-204ENST00000406477 UBR4Q5T4S7 5183 aa7.88□□□□□ -1.15
PARVB-204ENST00000406477 H0YAA0 97 aa7.88□□□□□ -1.15
PARVB-204ENST00000406477 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
PARVB-204ENST00000406477 A6NN06 94 aa7.82□□□□□ -1.16
PARVB-204ENST00000406477 KRTAP19-2Q3LHN2 52 aa7.82□□□□□ -1.16
PARVB-204ENST00000406477 P0C880 135 aa7.8□□□□□ -1.16
PARVB-204ENST00000406477 K7ERS5 55 aa7.74□□□□□ -1.17
PARVB-204ENST00000406477 M0QZ58 72 aa7.72□□□□□ -1.17
PARVB-204ENST00000406477 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
PARVB-204ENST00000406477 KTN1-AS1Q86SY8 53 aa7.67□□□□□ -1.18
PARVB-204ENST00000406477 RNF213Q63HN8 5207 aa7.61□□□□□ -1.19
PARVB-204ENST00000406477 A0A0D9SG42 100 aa7.61□□□□□ -1.19
PARVB-204ENST00000406477 R4GN34 69 aa7.58□□□□□ -1.2
PARVB-204ENST00000406477 FLGP20930 4061 aaPredicted RBP7.55□□□□□ -1.2
PARVB-204ENST00000406477 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
PARVB-204ENST00000406477 CRIPTQ9P021 101 aa7.49□□□□□ -1.21
PARVB-204ENST00000406477 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
PARVB-204ENST00000406477 SPINT4Q6UDR6 99 aa7.45□□□□□ -1.22
PARVB-204ENST00000406477 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
PARVB-204ENST00000406477 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
PARVB-204ENST00000406477 M0R2T5 61 aa7.42□□□□□ -1.22
PARVB-204ENST00000406477 MT1HP80294 61 aa7.42□□□□□ -1.22
PARVB-204ENST00000406477 MUC2Q02817 5179 aa7.41□□□□□ -1.22
PARVB-204ENST00000406477 LINC01554Q52M75 96 aa7.41□□□□□ -1.22
PARVB-204ENST00000406477 ROMO1P60602 79 aa7.39□□□□□ -1.23
PARVB-204ENST00000406477 PRAC1Q96KF2 57 aa7.33□□□□□ -1.24
PARVB-204ENST00000406477 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
PARVB-204ENST00000406477 LCE2BO14633 110 aa7.18□□□□□ -1.26
PARVB-204ENST00000406477 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
PARVB-204ENST00000406477 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
PARVB-204ENST00000406477 MT2AP02795 61 aa7.17□□□□□ -1.26
PARVB-204ENST00000406477 KRTAP10-10P60014 251 aa7.16□□□□□ -1.26
PARVB-204ENST00000406477 KRTAP9-8Q9BYQ0 159 aa7.16□□□□□ -1.26
PARVB-204ENST00000406477 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
PARVB-204ENST00000406477 MT1FP04733 61 aa7.12□□□□□ -1.27
PARVB-204ENST00000406477 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
PARVB-204ENST00000406477 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
PARVB-204ENST00000406477 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
PARVB-204ENST00000406477 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
PARVB-204ENST00000406477 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
PARVB-204ENST00000406477 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
PARVB-204ENST00000406477 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
PARVB-204ENST00000406477 KRTAP9-3Q9BYQ3 159 aa6.91□□□□□ -1.3
PARVB-204ENST00000406477 TNP1P09430 55 aa6.85□□□□□ -1.31
PARVB-204ENST00000406477 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
PARVB-204ENST00000406477 MT1BP07438 61 aa6.81□□□□□ -1.32
PARVB-204ENST00000406477 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
PARVB-204ENST00000406477 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
PARVB-204ENST00000406477 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
PARVB-204ENST00000406477 MT1XP80297 61 aa6.64□□□□□ -1.35
PARVB-204ENST00000406477 CRCT1Q9UGL9 99 aa6.64□□□□□ -1.35
PARVB-204ENST00000406477 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
PARVB-204ENST00000406477 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
PARVB-204ENST00000406477 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
PARVB-204ENST00000406477 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
PARVB-204ENST00000406477 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
PARVB-204ENST00000406477 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
PARVB-204ENST00000406477 H3BS24 57 aa6.29□□□□□ -1.4
PARVB-204ENST00000406477 USH2AO75445 5202 aa6.27□□□□□ -1.41
PARVB-204ENST00000406477 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
PARVB-204ENST00000406477 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
PARVB-204ENST00000406477 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
PARVB-204ENST00000406477 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
PARVB-204ENST00000406477 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
PARVB-204ENST00000406477 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
PARVB-204ENST00000406477 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
PARVB-204ENST00000406477 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
PARVB-204ENST00000406477 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
PARVB-204ENST00000406477 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
PARVB-204ENST00000406477 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
PARVB-204ENST00000406477 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
PARVB-204ENST00000406477 MACF1Q9UPN3 7388 aaKnown RBP5.93□□□□□ -1.46
PARVB-204ENST00000406477 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
PARVB-204ENST00000406477 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
PARVB-204ENST00000406477 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
PARVB-204ENST00000406477 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
PARVB-204ENST00000406477 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms