RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 RBM12B-AS1Q9P1G2 102 aa8.65□□□□□ -1.02
CSNK2A1-203ENST00000400217 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
CSNK2A1-203ENST00000400217 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
CSNK2A1-203ENST00000400217 Q1T7F1 81 aa8.5□□□□□ -1.05
CSNK2A1-203ENST00000400217 S4R3F8 94 aa8.49□□□□□ -1.05
CSNK2A1-203ENST00000400217 V9GYY9 64 aa8.47□□□□□ -1.05
CSNK2A1-203ENST00000400217 LCA10Q71F78 164 aa8.46□□□□□ -1.05
CSNK2A1-203ENST00000400217 KRTAP19-2Q3LHN2 52 aa8.45□□□□□ -1.06
CSNK2A1-203ENST00000400217 LINC01558Q9Y6Z2 57 aa8.43□□□□□ -1.06
CSNK2A1-203ENST00000400217 MUC2Q02817 5179 aa8.39□□□□□ -1.07
CSNK2A1-203ENST00000400217 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
CSNK2A1-203ENST00000400217 PSPHP1O15172 72 aa8.34□□□□□ -1.07
CSNK2A1-203ENST00000400217 PRR15LQ9BU68 103 aa8.34□□□□□ -1.07
CSNK2A1-203ENST00000400217 UBR4Q5T4S7 5183 aa8.33□□□□□ -1.08
CSNK2A1-203ENST00000400217 CSAG1Q6PB30 78 aa8.32□□□□□ -1.08
CSNK2A1-203ENST00000400217 RNF213Q63HN8 5207 aa8.31□□□□□ -1.08
CSNK2A1-203ENST00000400217 A0A1B0GU69 56 aa8.31□□□□□ -1.08
CSNK2A1-203ENST00000400217 SEC61GP60059 68 aa8.27□□□□□ -1.09
CSNK2A1-203ENST00000400217 Q5VV11 94 aa8.26□□□□□ -1.09
CSNK2A1-203ENST00000400217 LCE2CQ5TA81 110 aa8.26□□□□□ -1.09
CSNK2A1-203ENST00000400217 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
CSNK2A1-203ENST00000400217 H0YAA0 97 aa8.13□□□□□ -1.11
CSNK2A1-203ENST00000400217 KRTAP10-6P60371 365 aaPredicted RBP8.12□□□□□ -1.11
CSNK2A1-203ENST00000400217 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
CSNK2A1-203ENST00000400217 MT1HP80294 61 aa8.09□□□□□ -1.11
CSNK2A1-203ENST00000400217 A6NED7 52 aa8.08□□□□□ -1.12
CSNK2A1-203ENST00000400217 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
CSNK2A1-203ENST00000400217 A0A1B0GU33 70 aa8.06□□□□□ -1.12
CSNK2A1-203ENST00000400217 P0C880 135 aa8.06□□□□□ -1.12
CSNK2A1-203ENST00000400217 UQCR11O14957 56 aa8.05□□□□□ -1.12
CSNK2A1-203ENST00000400217 M0R2T5 61 aa8.03□□□□□ -1.12
CSNK2A1-203ENST00000400217 KRTAP4-8Q9BYQ9 185 aa8.02□□□□□ -1.13
CSNK2A1-203ENST00000400217 BRK1Q8WUW1 75 aa7.98□□□□□ -1.13
CSNK2A1-203ENST00000400217 MIR22HGQ0VDD5 57 aa7.95□□□□□ -1.14
CSNK2A1-203ENST00000400217 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
CSNK2A1-203ENST00000400217 CDC42SE1Q9NRR8 79 aa7.94□□□□□ -1.14
CSNK2A1-203ENST00000400217 A8MU10 97 aa7.89□□□□□ -1.15
CSNK2A1-203ENST00000400217 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
CSNK2A1-203ENST00000400217 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.87□□□□□ -1.15
CSNK2A1-203ENST00000400217 M0QZ58 72 aa7.87□□□□□ -1.15
CSNK2A1-203ENST00000400217 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
CSNK2A1-203ENST00000400217 KRTAP9-2Q9BYQ4 174 aa7.86□□□□□ -1.15
CSNK2A1-203ENST00000400217 R4GN34 69 aa7.82□□□□□ -1.16
CSNK2A1-203ENST00000400217 KRTAP9-6A0A140TA67 174 aa7.81□□□□□ -1.16
CSNK2A1-203ENST00000400217 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
CSNK2A1-203ENST00000400217 PRO0628Q9UI54 55 aa7.79□□□□□ -1.16
CSNK2A1-203ENST00000400217 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
CSNK2A1-203ENST00000400217 MT2AP02795 61 aa7.77□□□□□ -1.17
CSNK2A1-203ENST00000400217 A0A0D9SG42 100 aa7.75□□□□□ -1.17
CSNK2A1-203ENST00000400217 MT1FP04733 61 aa7.72□□□□□ -1.17
CSNK2A1-203ENST00000400217 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
CSNK2A1-203ENST00000400217 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
CSNK2A1-203ENST00000400217 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
CSNK2A1-203ENST00000400217 SPRR2GQ9BYE4 73 aa7.62□□□□□ -1.19
CSNK2A1-203ENST00000400217 K7ERS5 55 aa7.61□□□□□ -1.19
CSNK2A1-203ENST00000400217 KRTAP12-1P59990 96 aa7.59□□□□□ -1.19
CSNK2A1-203ENST00000400217 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
CSNK2A1-203ENST00000400217 SPINT4Q6UDR6 99 aa7.57□□□□□ -1.2
CSNK2A1-203ENST00000400217 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
CSNK2A1-203ENST00000400217 PMAIP1Q13794 54 aa7.55□□□□□ -1.2
CSNK2A1-203ENST00000400217 A6NN06 94 aa7.55□□□□□ -1.2
CSNK2A1-203ENST00000400217 KRTAP9-3Q9BYQ3 159 aa7.52□□□□□ -1.21
CSNK2A1-203ENST00000400217 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
CSNK2A1-203ENST00000400217 KRTAP9-9Q9BYP9 154 aa7.45□□□□□ -1.22
CSNK2A1-203ENST00000400217 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
CSNK2A1-203ENST00000400217 KRTAP19-8Q3LI54 63 aa7.42□□□□□ -1.22
CSNK2A1-203ENST00000400217 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
CSNK2A1-203ENST00000400217 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
CSNK2A1-203ENST00000400217 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
CSNK2A1-203ENST00000400217 MT1BP07438 61 aa7.31□□□□□ -1.24
CSNK2A1-203ENST00000400217 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
CSNK2A1-203ENST00000400217 ROMO1P60602 79 aa7.29□□□□□ -1.24
CSNK2A1-203ENST00000400217 KTN1-AS1Q86SY8 53 aa7.22□□□□□ -1.25
CSNK2A1-203ENST00000400217 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
CSNK2A1-203ENST00000400217 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
CSNK2A1-203ENST00000400217 MT1XP80297 61 aa7.07□□□□□ -1.28
CSNK2A1-203ENST00000400217 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
CSNK2A1-203ENST00000400217 PRAC1Q96KF2 57 aa7.06□□□□□ -1.28
CSNK2A1-203ENST00000400217 USH2AO75445 5202 aa7.06□□□□□ -1.28
CSNK2A1-203ENST00000400217 SVIPQ8NHG7 77 aa7.04□□□□□ -1.28
CSNK2A1-203ENST00000400217 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
CSNK2A1-203ENST00000400217 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
CSNK2A1-203ENST00000400217 TNP1P09430 55 aa6.98□□□□□ -1.29
CSNK2A1-203ENST00000400217 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
CSNK2A1-203ENST00000400217 KRTAP4-2Q9BYR5 136 aa6.97□□□□□ -1.29
CSNK2A1-203ENST00000400217 KRTAP19-6Q3LI70 58 aa6.87□□□□□ -1.31
CSNK2A1-203ENST00000400217 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
CSNK2A1-203ENST00000400217 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
CSNK2A1-203ENST00000400217 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
CSNK2A1-203ENST00000400217 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
CSNK2A1-203ENST00000400217 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
CSNK2A1-203ENST00000400217 FSIP2Q5CZC0 6907 aa6.7□□□□□ -1.34
CSNK2A1-203ENST00000400217 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
CSNK2A1-203ENST00000400217 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
CSNK2A1-203ENST00000400217 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
CSNK2A1-203ENST00000400217 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
CSNK2A1-203ENST00000400217 FCGBPQ9Y6R7 5405 aaPredicted RBP6.55□□□□□ -1.36
CSNK2A1-203ENST00000400217 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
CSNK2A1-203ENST00000400217 KMT2DO14686 5537 aa6.44□□□□□ -1.38
CSNK2A1-203ENST00000400217 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms