RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 A0A087WVE0 104 aa6.69□□□□□ -1.34
HLA-DQB1-202ENST00000399079 ATOX1O00244 68 aa6.69□□□□□ -1.34
HLA-DQB1-202ENST00000399079 USH2AO75445 5202 aa6.68□□□□□ -1.34
HLA-DQB1-202ENST00000399079 TRAV22A0A0B4J277 110 aa6.67□□□□□ -1.34
HLA-DQB1-202ENST00000399079 C1orf64Q8NEQ6 169 aa6.67□□□□□ -1.34
HLA-DQB1-202ENST00000399079 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
HLA-DQB1-202ENST00000399079 UQCRQO14949 82 aa6.61□□□□□ -1.35
HLA-DQB1-202ENST00000399079 C5orf47Q569G3 176 aa6.61□□□□□ -1.35
HLA-DQB1-202ENST00000399079 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
HLA-DQB1-202ENST00000399079 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
HLA-DQB1-202ENST00000399079 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
HLA-DQB1-202ENST00000399079 S4R3F8 94 aa6.6□□□□□ -1.35
HLA-DQB1-202ENST00000399079 H0Y9P7 68 aa6.59□□□□□ -1.35
HLA-DQB1-202ENST00000399079 COX7CP15954 63 aa6.58□□□□□ -1.36
HLA-DQB1-202ENST00000399079 LCA10Q71F78 164 aa6.58□□□□□ -1.36
HLA-DQB1-202ENST00000399079 SERP2Q8N6R1 65 aa6.57□□□□□ -1.36
HLA-DQB1-202ENST00000399079 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
HLA-DQB1-202ENST00000399079 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
HLA-DQB1-202ENST00000399079 OCR1Q9BZK8 76 aa6.53□□□□□ -1.36
HLA-DQB1-202ENST00000399079 LINC00208Q96KT6 92 aa6.51□□□□□ -1.37
HLA-DQB1-202ENST00000399079 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
HLA-DQB1-202ENST00000399079 TRAV7A0A075B6U4 112 aa6.5□□□□□ -1.37
HLA-DQB1-202ENST00000399079 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
HLA-DQB1-202ENST00000399079 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
HLA-DQB1-202ENST00000399079 MP68P56378 58 aa6.45□□□□□ -1.38
HLA-DQB1-202ENST00000399079 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
HLA-DQB1-202ENST00000399079 TMEM258P61165 79 aa6.42□□□□□ -1.38
HLA-DQB1-202ENST00000399079 NDUFC1O43677 76 aa6.4□□□□□ -1.38
HLA-DQB1-202ENST00000399079 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.38
HLA-DQB1-202ENST00000399079 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
HLA-DQB1-202ENST00000399079 A8MUN3 132 aa6.37□□□□□ -1.39
HLA-DQB1-202ENST00000399079 H3BPC8 53 aa6.35□□□□□ -1.39
HLA-DQB1-202ENST00000399079 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
HLA-DQB1-202ENST00000399079 SPRR2GQ9BYE4 73 aa6.34□□□□□ -1.39
HLA-DQB1-202ENST00000399079 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
HLA-DQB1-202ENST00000399079 H7BZZ5 65 aa6.29□□□□□ -1.4
HLA-DQB1-202ENST00000399079 MT1BP07438 61 aa6.29□□□□□ -1.4
HLA-DQB1-202ENST00000399079 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
HLA-DQB1-202ENST00000399079 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
HLA-DQB1-202ENST00000399079 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
HLA-DQB1-202ENST00000399079 SNURFQ9Y675 71 aa6.27□□□□□ -1.41
HLA-DQB1-202ENST00000399079 H0YAA0 97 aa6.26□□□□□ -1.41
HLA-DQB1-202ENST00000399079 Q5VV11 94 aa6.26□□□□□ -1.41
HLA-DQB1-202ENST00000399079 DMAC1Q96GE9 116 aa6.26□□□□□ -1.41
HLA-DQB1-202ENST00000399079 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
HLA-DQB1-202ENST00000399079 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
HLA-DQB1-202ENST00000399079 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
HLA-DQB1-202ENST00000399079 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
HLA-DQB1-202ENST00000399079 SERP1Q9Y6X1 66 aa6.21□□□□□ -1.42
HLA-DQB1-202ENST00000399079 KRTAP5-3Q6L8H2 238 aa6.19□□□□□ -1.42
HLA-DQB1-202ENST00000399079 A6NN06 94 aa6.15□□□□□ -1.42
HLA-DQB1-202ENST00000399079 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
HLA-DQB1-202ENST00000399079 P0C880 135 aa6.13□□□□□ -1.43
HLA-DQB1-202ENST00000399079 ACYP2P14621 99 aa6.12□□□□□ -1.43
HLA-DQB1-202ENST00000399079 SPANXA2-OT1Q8N9U9 137 aa6.11□□□□□ -1.43
HLA-DQB1-202ENST00000399079 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
HLA-DQB1-202ENST00000399079 SMIM26A0A096LP01 95 aa6.09□□□□□ -1.44
HLA-DQB1-202ENST00000399079 R4GN34 69 aa6.06□□□□□ -1.44
HLA-DQB1-202ENST00000399079 M0QZ58 72 aa6.03□□□□□ -1.44
HLA-DQB1-202ENST00000399079 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
HLA-DQB1-202ENST00000399079 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
HLA-DQB1-202ENST00000399079 KRTAP6-3Q3LI67 103 aa5.99□□□□□ -1.45
HLA-DQB1-202ENST00000399079 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
HLA-DQB1-202ENST00000399079 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
HLA-DQB1-202ENST00000399079 PLAC4Q8WY50 150 aa5.96□□□□□ -1.46
HLA-DQB1-202ENST00000399079 V9GYY9 64 aa5.95□□□□□ -1.46
HLA-DQB1-202ENST00000399079 MT1XP80297 61 aa5.93□□□□□ -1.46
HLA-DQB1-202ENST00000399079 Q1T7F1 81 aa5.9□□□□□ -1.46
HLA-DQB1-202ENST00000399079 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
HLA-DQB1-202ENST00000399079 COA5Q86WW8 74 aa5.88□□□□□ -1.47
HLA-DQB1-202ENST00000399079 KMT2DO14686 5537 aa5.8□□□□□ -1.48
HLA-DQB1-202ENST00000399079 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
HLA-DQB1-202ENST00000399079 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
HLA-DQB1-202ENST00000399079 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
HLA-DQB1-202ENST00000399079 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
HLA-DQB1-202ENST00000399079 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
HLA-DQB1-202ENST00000399079 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
HLA-DQB1-202ENST00000399079 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
HLA-DQB1-202ENST00000399079 PSPHP1O15172 72 aa5.71□□□□□ -1.5
HLA-DQB1-202ENST00000399079 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
HLA-DQB1-202ENST00000399079 BRK1Q8WUW1 75 aa5.69□□□□□ -1.5
HLA-DQB1-202ENST00000399079 NEBP20929 6669 aa5.69□□□□□ -1.5
HLA-DQB1-202ENST00000399079 SEC61GP60059 68 aa5.69□□□□□ -1.5
HLA-DQB1-202ENST00000399079 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
HLA-DQB1-202ENST00000399079 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
HLA-DQB1-202ENST00000399079 MDN1Q9NU22 5596 aa5.65□□□□□ -1.5
HLA-DQB1-202ENST00000399079 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
HLA-DQB1-202ENST00000399079 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
HLA-DQB1-202ENST00000399079 A0A0D9SG42 100 aa5.61□□□□□ -1.51
HLA-DQB1-202ENST00000399079 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
HLA-DQB1-202ENST00000399079 A0A1B0GU33 70 aa5.6□□□□□ -1.51
HLA-DQB1-202ENST00000399079 A6NED7 52 aa5.6□□□□□ -1.51
HLA-DQB1-202ENST00000399079 A0A1B0GU69 56 aa5.59□□□□□ -1.51
HLA-DQB1-202ENST00000399079 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
HLA-DQB1-202ENST00000399079 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
HLA-DQB1-202ENST00000399079 SPRR2EP22531 72 aa5.53□□□□□ -1.52
HLA-DQB1-202ENST00000399079 SPRR2BP35325 72 aa5.53□□□□□ -1.52
HLA-DQB1-202ENST00000399079 SPRR2AP35326 72 aa5.53□□□□□ -1.52
HLA-DQB1-202ENST00000399079 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
HLA-DQB1-202ENST00000399079 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms