RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
TSPAN4-205ENST00000397406 H1FX-AS1Q4G0G2 97 aa8.41□□□□□ -1.06
TSPAN4-205ENST00000397406 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
TSPAN4-205ENST00000397406 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
TSPAN4-205ENST00000397406 ACYP2P14621 99 aa8.36□□□□□ -1.07
TSPAN4-205ENST00000397406 CRCT1Q9UGL9 99 aa8.31□□□□□ -1.08
TSPAN4-205ENST00000397406 FSIP2Q5CZC0 6907 aa8.29□□□□□ -1.08
TSPAN4-205ENST00000397406 S4R3F8 94 aa8.29□□□□□ -1.08
TSPAN4-205ENST00000397406 LCA10Q71F78 164 aa8.27□□□□□ -1.09
TSPAN4-205ENST00000397406 COA5Q86WW8 74 aa8.26□□□□□ -1.09
TSPAN4-205ENST00000397406 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
TSPAN4-205ENST00000397406 M0R2T5 61 aa8.22□□□□□ -1.09
TSPAN4-205ENST00000397406 CHKB-CPT1BH3BT56 60 aa8.2□□□□□ -1.1
TSPAN4-205ENST00000397406 SERP1Q9Y6X1 66 aa8.16□□□□□ -1.1
TSPAN4-205ENST00000397406 CSAG1Q6PB30 78 aa8.12□□□□□ -1.11
TSPAN4-205ENST00000397406 KRTAP9-8Q9BYQ0 159 aa8.12□□□□□ -1.11
TSPAN4-205ENST00000397406 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
TSPAN4-205ENST00000397406 RPS28P62857 69 aaKnown RBP8.03□□□□□ -1.12
TSPAN4-205ENST00000397406 USH2AO75445 5202 aa7.98□□□□□ -1.13
TSPAN4-205ENST00000397406 MT2AP02795 61 aa7.96□□□□□ -1.13
TSPAN4-205ENST00000397406 H0YAA0 97 aa7.95□□□□□ -1.14
TSPAN4-205ENST00000397406 SSPOA2VEC9 5147 aa7.93□□□□□ -1.14
TSPAN4-205ENST00000397406 MT1FP04733 61 aa7.92□□□□□ -1.14
TSPAN4-205ENST00000397406 SMIM26A0A096LP01 95 aa7.9□□□□□ -1.14
TSPAN4-205ENST00000397406 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
TSPAN4-205ENST00000397406 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
TSPAN4-205ENST00000397406 LINC01558Q9Y6Z2 57 aa7.87□□□□□ -1.15
TSPAN4-205ENST00000397406 LCE2BO14633 110 aa7.86□□□□□ -1.15
TSPAN4-205ENST00000397406 KRTAP9-3Q9BYQ3 159 aa7.86□□□□□ -1.15
TSPAN4-205ENST00000397406 Q1T7F1 81 aa7.83□□□□□ -1.16
TSPAN4-205ENST00000397406 P0C880 135 aa7.82□□□□□ -1.16
TSPAN4-205ENST00000397406 A0A1B0GU69 56 aa7.8□□□□□ -1.16
TSPAN4-205ENST00000397406 SEC61GP60059 68 aa7.8□□□□□ -1.16
TSPAN4-205ENST00000397406 V9GYY9 64 aa7.79□□□□□ -1.16
TSPAN4-205ENST00000397406 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.77□□□□□ -1.17
TSPAN4-205ENST00000397406 KRTAP10-10P60014 251 aa7.77□□□□□ -1.17
TSPAN4-205ENST00000397406 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
TSPAN4-205ENST00000397406 PRR15LQ9BU68 103 aa7.73□□□□□ -1.17
TSPAN4-205ENST00000397406 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
TSPAN4-205ENST00000397406 PSPHP1O15172 72 aa7.68□□□□□ -1.18
TSPAN4-205ENST00000397406 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
TSPAN4-205ENST00000397406 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
TSPAN4-205ENST00000397406 A0A1B0GU33 70 aa7.65□□□□□ -1.18
TSPAN4-205ENST00000397406 Q5VV11 94 aa7.63□□□□□ -1.19
TSPAN4-205ENST00000397406 R4GN34 69 aa7.61□□□□□ -1.19
TSPAN4-205ENST00000397406 M0QZ58 72 aa7.6□□□□□ -1.19
TSPAN4-205ENST00000397406 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
TSPAN4-205ENST00000397406 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
TSPAN4-205ENST00000397406 KRTAP19-6Q3LI70 58 aa7.54□□□□□ -1.2
TSPAN4-205ENST00000397406 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
TSPAN4-205ENST00000397406 UQCR11O14957 56 aa7.52□□□□□ -1.21
TSPAN4-205ENST00000397406 KRTAP19-8Q3LI54 63 aa7.44□□□□□ -1.22
TSPAN4-205ENST00000397406 LINC01554Q52M75 96 aa7.44□□□□□ -1.22
TSPAN4-205ENST00000397406 A6NED7 52 aa7.44□□□□□ -1.22
TSPAN4-205ENST00000397406 MIR22HGQ0VDD5 57 aa7.42□□□□□ -1.22
TSPAN4-205ENST00000397406 A8MU10 97 aa7.4□□□□□ -1.22
TSPAN4-205ENST00000397406 A0A0D9SG42 100 aa7.39□□□□□ -1.23
TSPAN4-205ENST00000397406 SVIPQ8NHG7 77 aa7.39□□□□□ -1.23
TSPAN4-205ENST00000397406 MACF1Q9UPN3 7388 aaKnown RBP7.39□□□□□ -1.23
TSPAN4-205ENST00000397406 MT1BP07438 61 aa7.36□□□□□ -1.23
TSPAN4-205ENST00000397406 A6NN06 94 aa7.35□□□□□ -1.23
TSPAN4-205ENST00000397406 SYNE2Q8WXH0 6885 aaKnown RBP7.3□□□□□ -1.24
TSPAN4-205ENST00000397406 KRTAP12-1P59990 96 aa7.29□□□□□ -1.24
TSPAN4-205ENST00000397406 CDC42SE1Q9NRR8 79 aa7.29□□□□□ -1.24
TSPAN4-205ENST00000397406 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
TSPAN4-205ENST00000397406 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
TSPAN4-205ENST00000397406 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
TSPAN4-205ENST00000397406 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
TSPAN4-205ENST00000397406 BRK1Q8WUW1 75 aa7.18□□□□□ -1.26
TSPAN4-205ENST00000397406 K7ERS5 55 aa7.1□□□□□ -1.27
TSPAN4-205ENST00000397406 CAMK2N1Q7Z7J9 78 aa7.09□□□□□ -1.28
TSPAN4-205ENST00000397406 MT1XP80297 61 aa7.06□□□□□ -1.28
TSPAN4-205ENST00000397406 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
TSPAN4-205ENST00000397406 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
TSPAN4-205ENST00000397406 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
TSPAN4-205ENST00000397406 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
TSPAN4-205ENST00000397406 PRO0628Q9UI54 55 aa6.9□□□□□ -1.31
TSPAN4-205ENST00000397406 NEBP20929 6669 aa6.89□□□□□ -1.31
TSPAN4-205ENST00000397406 KRTAP5-9P26371 169 aa6.87□□□□□ -1.31
TSPAN4-205ENST00000397406 KMT2DO14686 5537 aa6.83□□□□□ -1.32
TSPAN4-205ENST00000397406 ROMO1P60602 79 aa6.79□□□□□ -1.32
TSPAN4-205ENST00000397406 MDN1Q9NU22 5596 aa6.77□□□□□ -1.33
TSPAN4-205ENST00000397406 PMAIP1Q13794 54 aa6.76□□□□□ -1.33
TSPAN4-205ENST00000397406 KRTAP10-7P60409 375 aaPredicted RBP6.76□□□□□ -1.33
TSPAN4-205ENST00000397406 TNP1P09430 55 aa6.72□□□□□ -1.33
TSPAN4-205ENST00000397406 KRTAP10-12P60413 245 aa6.7□□□□□ -1.34
TSPAN4-205ENST00000397406 KRTAP20-1Q3LI63 56 aa6.68□□□□□ -1.34
TSPAN4-205ENST00000397406 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
TSPAN4-205ENST00000397406 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.36
TSPAN4-205ENST00000397406 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
TSPAN4-205ENST00000397406 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
TSPAN4-205ENST00000397406 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
TSPAN4-205ENST00000397406 SPRR2EP22531 72 aa6.5□□□□□ -1.37
TSPAN4-205ENST00000397406 SPRR2BP35325 72 aa6.5□□□□□ -1.37
TSPAN4-205ENST00000397406 SPRR2AP35326 72 aa6.5□□□□□ -1.37
TSPAN4-205ENST00000397406 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
TSPAN4-205ENST00000397406 KRTAP2-3P0C7H8 128 aa6.49□□□□□ -1.37
TSPAN4-205ENST00000397406 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
TSPAN4-205ENST00000397406 KRTAP2-4Q9BYR9 128 aa6.49□□□□□ -1.37
TSPAN4-205ENST00000397406 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms