RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
GAPDH-203ENST00000396858 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
GAPDH-203ENST00000396858 A8MUN3 132 aa6.98□□□□□ -1.29
GAPDH-203ENST00000396858 TMEM258P61165 79 aa6.93□□□□□ -1.3
GAPDH-203ENST00000396858 MT1HP80294 61 aa6.93□□□□□ -1.3
GAPDH-203ENST00000396858 S4R3F8 94 aa6.92□□□□□ -1.3
GAPDH-203ENST00000396858 ACYP2P14621 99 aa6.89□□□□□ -1.31
GAPDH-203ENST00000396858 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
GAPDH-203ENST00000396858 LCA10Q71F78 164 aa6.89□□□□□ -1.31
GAPDH-203ENST00000396858 COA5Q86WW8 74 aa6.85□□□□□ -1.31
GAPDH-203ENST00000396858 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
GAPDH-203ENST00000396858 M0R2T5 61 aa6.83□□□□□ -1.32
GAPDH-203ENST00000396858 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
GAPDH-203ENST00000396858 CSAG1Q6PB30 78 aa6.74□□□□□ -1.33
GAPDH-203ENST00000396858 H3BS24 57 aa6.7□□□□□ -1.34
GAPDH-203ENST00000396858 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
GAPDH-203ENST00000396858 SPTSSBQ8NFR3 76 aa6.7□□□□□ -1.34
GAPDH-203ENST00000396858 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
GAPDH-203ENST00000396858 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
GAPDH-203ENST00000396858 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
GAPDH-203ENST00000396858 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
GAPDH-203ENST00000396858 MT2AP02795 61 aa6.6□□□□□ -1.35
GAPDH-203ENST00000396858 KRTAP4-12Q9BQ66 201 aa6.6□□□□□ -1.35
GAPDH-203ENST00000396858 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
GAPDH-203ENST00000396858 MT1FP04733 61 aa6.57□□□□□ -1.36
GAPDH-203ENST00000396858 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
GAPDH-203ENST00000396858 H0YAA0 97 aa6.56□□□□□ -1.36
GAPDH-203ENST00000396858 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
GAPDH-203ENST00000396858 P0C880 135 aa6.52□□□□□ -1.37
GAPDH-203ENST00000396858 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
GAPDH-203ENST00000396858 RPS28P62857 69 aaKnown RBP6.5□□□□□ -1.37
GAPDH-203ENST00000396858 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
GAPDH-203ENST00000396858 SMIM26A0A096LP01 95 aa6.47□□□□□ -1.37
GAPDH-203ENST00000396858 A0A1B0GU69 56 aa6.46□□□□□ -1.38
GAPDH-203ENST00000396858 LINC01558Q9Y6Z2 57 aa6.46□□□□□ -1.38
GAPDH-203ENST00000396858 SEC61GP60059 68 aa6.45□□□□□ -1.38
GAPDH-203ENST00000396858 SVIPQ8NHG7 77 aa6.43□□□□□ -1.38
GAPDH-203ENST00000396858 PRR15LQ9BU68 103 aa6.41□□□□□ -1.38
GAPDH-203ENST00000396858 Q1T7F1 81 aa6.39□□□□□ -1.39
GAPDH-203ENST00000396858 V9GYY9 64 aa6.38□□□□□ -1.39
GAPDH-203ENST00000396858 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
GAPDH-203ENST00000396858 M0QZ58 72 aa6.35□□□□□ -1.39
GAPDH-203ENST00000396858 PSPHP1O15172 72 aa6.35□□□□□ -1.39
GAPDH-203ENST00000396858 KRTAP9-9Q9BYP9 154 aa6.35□□□□□ -1.39
GAPDH-203ENST00000396858 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
GAPDH-203ENST00000396858 CRIPTQ9P021 101 aa6.35□□□□□ -1.39
GAPDH-203ENST00000396858 R4GN34 69 aa6.34□□□□□ -1.39
GAPDH-203ENST00000396858 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
GAPDH-203ENST00000396858 A0A1B0GU33 70 aa6.31□□□□□ -1.4
GAPDH-203ENST00000396858 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
GAPDH-203ENST00000396858 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
GAPDH-203ENST00000396858 Q5VV11 94 aa6.29□□□□□ -1.4
GAPDH-203ENST00000396858 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
GAPDH-203ENST00000396858 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
GAPDH-203ENST00000396858 USH2AO75445 5202 aa6.25□□□□□ -1.41
GAPDH-203ENST00000396858 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
GAPDH-203ENST00000396858 A0A0D9SG42 100 aa6.19□□□□□ -1.42
GAPDH-203ENST00000396858 UQCR11O14957 56 aa6.19□□□□□ -1.42
GAPDH-203ENST00000396858 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
GAPDH-203ENST00000396858 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
GAPDH-203ENST00000396858 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
GAPDH-203ENST00000396858 A8MU10 97 aa6.16□□□□□ -1.42
GAPDH-203ENST00000396858 A6NED7 52 aa6.15□□□□□ -1.42
GAPDH-203ENST00000396858 MT1BP07438 61 aa6.15□□□□□ -1.42
GAPDH-203ENST00000396858 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
GAPDH-203ENST00000396858 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
GAPDH-203ENST00000396858 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
GAPDH-203ENST00000396858 A6NN06 94 aa6.07□□□□□ -1.44
GAPDH-203ENST00000396858 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
GAPDH-203ENST00000396858 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
GAPDH-203ENST00000396858 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
GAPDH-203ENST00000396858 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
GAPDH-203ENST00000396858 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
GAPDH-203ENST00000396858 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
GAPDH-203ENST00000396858 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
GAPDH-203ENST00000396858 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
GAPDH-203ENST00000396858 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
GAPDH-203ENST00000396858 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
GAPDH-203ENST00000396858 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
GAPDH-203ENST00000396858 MT1XP80297 61 aa5.9□□□□□ -1.46
GAPDH-203ENST00000396858 K7ERS5 55 aa5.87□□□□□ -1.47
GAPDH-203ENST00000396858 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
GAPDH-203ENST00000396858 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
GAPDH-203ENST00000396858 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
GAPDH-203ENST00000396858 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
GAPDH-203ENST00000396858 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
GAPDH-203ENST00000396858 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
GAPDH-203ENST00000396858 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
GAPDH-203ENST00000396858 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
GAPDH-203ENST00000396858 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
GAPDH-203ENST00000396858 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.51
GAPDH-203ENST00000396858 PRO0628Q9UI54 55 aa5.62□□□□□ -1.51
GAPDH-203ENST00000396858 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
GAPDH-203ENST00000396858 ROMO1P60602 79 aa5.6□□□□□ -1.51
GAPDH-203ENST00000396858 TNP1P09430 55 aa5.57□□□□□ -1.52
GAPDH-203ENST00000396858 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
GAPDH-203ENST00000396858 KMT2DO14686 5537 aa5.53□□□□□ -1.52
GAPDH-203ENST00000396858 PMAIP1Q13794 54 aa5.53□□□□□ -1.52
GAPDH-203ENST00000396858 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
GAPDH-203ENST00000396858 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms