RNA–Protein interactions for RNA: ENST00000395833.7

LMO2-202, Transcript of LIM domain only 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-202ENST00000395833 LCA10Q71F78 164 aa14.65□□□□□ -0.06
LMO2-202ENST00000395833 LINC01558Q9Y6Z2 57 aa14.62□□□□□ -0.07
LMO2-202ENST00000395833 PRR15LQ9BU68 103 aa14.56□□□□□ -0.08
LMO2-202ENST00000395833 PSPHP1O15172 72 aa14.55□□□□□ -0.08
LMO2-202ENST00000395833 KRTAP3-3Q9BYR6 98 aa14.55□□□□□ -0.08
LMO2-202ENST00000395833 KRTAP19-2Q3LHN2 52 aa14.49□□□□□ -0.09
LMO2-202ENST00000395833 A0A1B0GU69 56 aa14.44□□□□□ -0.1
LMO2-202ENST00000395833 Q5VV11 94 aa14.39□□□□□ -0.11
LMO2-202ENST00000395833 SEC61GP60059 68 aa14.36□□□□□ -0.11
LMO2-202ENST00000395833 CSAG1Q6PB30 78 aa14.36□□□□□ -0.11
LMO2-202ENST00000395833 MUC2Q02817 5179 aa14.34□□□□□ -0.11
LMO2-202ENST00000395833 UBR4Q5T4S7 5183 aa14.31□□□□□ -0.12
LMO2-202ENST00000395833 RNF213Q63HN8 5207 aa14.27□□□□□ -0.13
LMO2-202ENST00000395833 LCE2CQ5TA81 110 aa14.17□□□□□ -0.14
LMO2-202ENST00000395833 A6NED7 52 aa14.12□□□□□ -0.15
LMO2-202ENST00000395833 FLGP20930 4061 aaPredicted RBP14.11□□□□□ -0.15
LMO2-202ENST00000395833 ADM2Q7Z4H4 148 aa14.06□□□□□ -0.16
LMO2-202ENST00000395833 KRTAP3-2Q9BYR7 98 aa14.05□□□□□ -0.16
LMO2-202ENST00000395833 KRTAP10-6P60371 365 aaPredicted RBP14.02□□□□□ -0.16
LMO2-202ENST00000395833 A0A1B0GU33 70 aa13.98□□□□□ -0.17
LMO2-202ENST00000395833 H0YAA0 97 aa13.98□□□□□ -0.17
LMO2-202ENST00000395833 UQCR11O14957 56 aa13.98□□□□□ -0.17
LMO2-202ENST00000395833 BRK1Q8WUW1 75 aa13.98□□□□□ -0.17
LMO2-202ENST00000395833 P0C880 135 aa13.96□□□□□ -0.17
LMO2-202ENST00000395833 MT1HP80294 61 aa13.92□□□□□ -0.18
LMO2-202ENST00000395833 M0R2T5 61 aa13.88□□□□□ -0.19
LMO2-202ENST00000395833 MIR22HGQ0VDD5 57 aa13.85□□□□□ -0.19
LMO2-202ENST00000395833 FAT4Q6V0I7 4981 aa13.83□□□□□ -0.2
LMO2-202ENST00000395833 CDC42SE1Q9NRR8 79 aa13.82□□□□□ -0.2
LMO2-202ENST00000395833 A8MU10 97 aa13.78□□□□□ -0.2
LMO2-202ENST00000395833 SPATA8Q6RVD6 105 aa13.78□□□□□ -0.2
LMO2-202ENST00000395833 KRTAP13-4Q3LI77 160 aa13.68□□□□□ -0.22
LMO2-202ENST00000395833 PRO0628Q9UI54 55 aa13.61□□□□□ -0.23
LMO2-202ENST00000395833 M0QZ58 72 aa13.59□□□□□ -0.23
LMO2-202ENST00000395833 LORP23490 312 aaPredicted RBP13.57□□□□□ -0.24
LMO2-202ENST00000395833 R4GN34 69 aa13.55□□□□□ -0.24
LMO2-202ENST00000395833 A0A0D9SG42 100 aa13.5□□□□□ -0.25
LMO2-202ENST00000395833 CRIPTQ9P021 101 aa13.39□□□□□ -0.27
LMO2-202ENST00000395833 MT2AP02795 61 aa13.38□□□□□ -0.27
LMO2-202ENST00000395833 KRTAP9-8Q9BYQ0 159 aa13.38□□□□□ -0.27
LMO2-202ENST00000395833 LINC01554Q52M75 96 aa13.36□□□□□ -0.27
LMO2-202ENST00000395833 KRTAP10-10P60014 251 aa13.32□□□□□ -0.28
LMO2-202ENST00000395833 MT1FP04733 61 aa13.31□□□□□ -0.28
LMO2-202ENST00000395833 LCE2AQ5TA79 106 aaPredicted RBP13.31□□□□□ -0.28
LMO2-202ENST00000395833 K7ERS5 55 aa13.24□□□□□ -0.29
LMO2-202ENST00000395833 PMAIP1Q13794 54 aa13.18□□□□□ -0.3
LMO2-202ENST00000395833 SPINT4Q6UDR6 99 aa13.18□□□□□ -0.3
LMO2-202ENST00000395833 KRTAP12-1P59990 96 aa13.15□□□□□ -0.3
LMO2-202ENST00000395833 KRTAP12-2P59991 146 aa13.13□□□□□ -0.31
LMO2-202ENST00000395833 SPRR2GQ9BYE4 73 aa13.09□□□□□ -0.31
LMO2-202ENST00000395833 A6NN06 94 aa13.08□□□□□ -0.32
LMO2-202ENST00000395833 KRTAP19-1Q8IUB9 90 aa13.05□□□□□ -0.32
LMO2-202ENST00000395833 KRTAP9-3Q9BYQ3 159 aa12.9□□□□□ -0.34
LMO2-202ENST00000395833 KRTAP19-8Q3LI54 63 aa12.74□□□□□ -0.37
LMO2-202ENST00000395833 PLAC4Q8WY50 150 aa12.74□□□□□ -0.37
LMO2-202ENST00000395833 CAMK2N1Q7Z7J9 78 aa12.73□□□□□ -0.37
LMO2-202ENST00000395833 ROMO1P60602 79 aa12.67□□□□□ -0.38
LMO2-202ENST00000395833 KTN1-AS1Q86SY8 53 aa12.63□□□□□ -0.39
LMO2-202ENST00000395833 MT1BP07438 61 aa12.59□□□□□ -0.39
LMO2-202ENST00000395833 LCE2BO14633 110 aa12.55□□□□□ -0.4
LMO2-202ENST00000395833 C10orf95Q9H7T3 257 aa12.45□□□□□ -0.42
LMO2-202ENST00000395833 SVIPQ8NHG7 77 aa12.39□□□□□ -0.43
LMO2-202ENST00000395833 PRAC1Q96KF2 57 aa12.39□□□□□ -0.43
LMO2-202ENST00000395833 MT1XP80297 61 aa12.19□□□□□ -0.46
LMO2-202ENST00000395833 KRTAP10-5P60370 271 aa12.16□□□□□ -0.46
LMO2-202ENST00000395833 KRTAP25-1Q3LHN0 102 aa12.12□□□□□ -0.47
LMO2-202ENST00000395833 USH2AO75445 5202 aa12.11□□□□□ -0.47
LMO2-202ENST00000395833 LCE2DQ5TA82 110 aaPredicted RBP12.1□□□□□ -0.47
LMO2-202ENST00000395833 TNP1P09430 55 aa12.09□□□□□ -0.47
LMO2-202ENST00000395833 PRO2289Q9P1D8 64 aa12.08□□□□□ -0.48
LMO2-202ENST00000395833 KRTAP19-6Q3LI70 58 aa11.77□□□□□ -0.53
LMO2-202ENST00000395833 KRTAP10-7P60409 375 aaPredicted RBP11.72□□□□□ -0.53
LMO2-202ENST00000395833 SSPOA2VEC9 5147 aa11.71□□□□□ -0.53
LMO2-202ENST00000395833 PP632Q6XCG6 107 aa11.7□□□□□ -0.54
LMO2-202ENST00000395833 KRTAP9-2Q9BYQ4 174 aa11.7□□□□□ -0.54
LMO2-202ENST00000395833 KRTAP23-1A1A580 65 aa11.63□□□□□ -0.55
LMO2-202ENST00000395833 KRTAP10-12P60413 245 aa11.62□□□□□ -0.55
LMO2-202ENST00000395833 LCE3AQ5TA76 89 aa11.58□□□□□ -0.56
LMO2-202ENST00000395833 FSIP2Q5CZC0 6907 aa11.52□□□□□ -0.57
LMO2-202ENST00000395833 KRTAP8-1Q8IUC2 63 aa11.27□□□□□ -0.6
LMO2-202ENST00000395833 KRTAP4-8A0A0G2JLE6 195 aa11.26□□□□□ -0.61
LMO2-202ENST00000395833 KRTAP4-8Q9BYQ9 185 aa11.26□□□□□ -0.61
LMO2-202ENST00000395833 CRCT1Q9UGL9 99 aa11.24□□□□□ -0.61
LMO2-202ENST00000395833 FCGBPQ9Y6R7 5405 aaPredicted RBP11.22□□□□□ -0.61
LMO2-202ENST00000395833 KRTAP9-6A0A140TA67 174 aa11.1□□□□□ -0.63
LMO2-202ENST00000395833 KRTAP12-3P60328 96 aa11.09□□□□□ -0.63
LMO2-202ENST00000395833 KMT2DO14686 5537 aa11.08□□□□□ -0.64
LMO2-202ENST00000395833 KRTAP19-5Q3LI72 72 aa11.05□□□□□ -0.64
LMO2-202ENST00000395833 KRTAP15-1Q3LI76 137 aa10.87□□□□□ -0.67
LMO2-202ENST00000395833 KRTAP19-7Q3SYF9 63 aa10.85□□□□□ -0.67
LMO2-202ENST00000395833 MT1EP04732 61 aa10.69□□□□□ -0.7
LMO2-202ENST00000395833 MACF1Q9UPN3 7388 aaKnown RBP10.62□□□□□ -0.71
LMO2-202ENST00000395833 SPRR2FQ96RM1 72 aa10.51□□□□□ -0.73
LMO2-202ENST00000395833 MT1LQ93083 61 aa10.48□□□□□ -0.73
LMO2-202ENST00000395833 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.4□□□□□ -0.74
LMO2-202ENST00000395833 LCE3CQ5T5A8 94 aa10.35□□□□□ -0.75
LMO2-202ENST00000395833 SPRR5A0A1B0GTR4 108 aa10.33□□□□□ -0.76
LMO2-202ENST00000395833 SYNE2Q8WXH0 6885 aaKnown RBP10.31□□□□□ -0.76
LMO2-202ENST00000395833 KRTAP5-9P26371 169 aa10.31□□□□□ -0.76
LMO2-202ENST00000395833 KRTAP19-4Q3LI73 84 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms