RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 MUC17Q685J3 4493 aa10.78□□□□□ -0.68
SPHK1-202ENST00000392496 A0A1B0GU69 56 aa10.77□□□□□ -0.69
SPHK1-202ENST00000392496 H1FX-AS1Q4G0G2 97 aa10.75□□□□□ -0.69
SPHK1-202ENST00000392496 S4R3F8 94 aa10.71□□□□□ -0.69
SPHK1-202ENST00000392496 LCA10Q71F78 164 aa10.69□□□□□ -0.7
SPHK1-202ENST00000392496 BRK1Q8WUW1 75 aa10.67□□□□□ -0.7
SPHK1-202ENST00000392496 KRTAP3-3Q9BYR6 98 aa10.67□□□□□ -0.7
SPHK1-202ENST00000392496 KRTAP4-1Q9BYQ7 146 aa10.67□□□□□ -0.7
SPHK1-202ENST00000392496 SEC61GP60059 68 aa10.65□□□□□ -0.7
SPHK1-202ENST00000392496 A6NED7 52 aa10.64□□□□□ -0.71
SPHK1-202ENST00000392496 UBR4Q5T4S7 5183 aa10.59□□□□□ -0.71
SPHK1-202ENST00000392496 PRO0628Q9UI54 55 aa10.56□□□□□ -0.72
SPHK1-202ENST00000392496 CDC42SE1Q9NRR8 79 aa10.5□□□□□ -0.73
SPHK1-202ENST00000392496 UQCR11O14957 56 aa10.49□□□□□ -0.73
SPHK1-202ENST00000392496 CSAG1Q6PB30 78 aa10.45□□□□□ -0.74
SPHK1-202ENST00000392496 KRTAP19-2Q3LHN2 52 aa10.44□□□□□ -0.74
SPHK1-202ENST00000392496 A8MU10 97 aa10.44□□□□□ -0.74
SPHK1-202ENST00000392496 SPATA8Q6RVD6 105 aa10.4□□□□□ -0.74
SPHK1-202ENST00000392496 A0A1B0GU33 70 aa10.38□□□□□ -0.75
SPHK1-202ENST00000392496 MIR22HGQ0VDD5 57 aa10.38□□□□□ -0.75
SPHK1-202ENST00000392496 RNF213Q63HN8 5207 aa10.37□□□□□ -0.75
SPHK1-202ENST00000392496 MUC2Q02817 5179 aa10.35□□□□□ -0.75
SPHK1-202ENST00000392496 KRTAP10-6P60371 365 aaPredicted RBP10.35□□□□□ -0.75
SPHK1-202ENST00000392496 KRTAP3-2Q9BYR7 98 aa10.35□□□□□ -0.75
SPHK1-202ENST00000392496 H0YAA0 97 aa10.26□□□□□ -0.77
SPHK1-202ENST00000392496 ADM2Q7Z4H4 148 aa10.26□□□□□ -0.77
SPHK1-202ENST00000392496 P0C880 135 aa10.22□□□□□ -0.77
SPHK1-202ENST00000392496 FLGP20930 4061 aaPredicted RBP10.17□□□□□ -0.78
SPHK1-202ENST00000392496 SVIPQ8NHG7 77 aa10.13□□□□□ -0.79
SPHK1-202ENST00000392496 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
SPHK1-202ENST00000392496 PMAIP1Q13794 54 aa10.1□□□□□ -0.79
SPHK1-202ENST00000392496 KRTAP13-4Q3LI77 160 aa10.09□□□□□ -0.79
SPHK1-202ENST00000392496 A6NN06 94 aa10.03□□□□□ -0.8
SPHK1-202ENST00000392496 M0QZ58 72 aa10.01□□□□□ -0.81
SPHK1-202ENST00000392496 FAT4Q6V0I7 4981 aa9.99□□□□□ -0.81
SPHK1-202ENST00000392496 M0R2T5 61 aa9.92□□□□□ -0.82
SPHK1-202ENST00000392496 A0A0D9SG42 100 aa9.91□□□□□ -0.82
SPHK1-202ENST00000392496 MT1HP80294 61 aa9.88□□□□□ -0.83
SPHK1-202ENST00000392496 K7ERS5 55 aa9.88□□□□□ -0.83
SPHK1-202ENST00000392496 R4GN34 69 aa9.87□□□□□ -0.83
SPHK1-202ENST00000392496 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
SPHK1-202ENST00000392496 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
SPHK1-202ENST00000392496 KTN1-AS1Q86SY8 53 aa9.75□□□□□ -0.85
SPHK1-202ENST00000392496 CRIPTQ9P021 101 aa9.74□□□□□ -0.85
SPHK1-202ENST00000392496 KRTAP12-1P59990 96 aa9.73□□□□□ -0.85
SPHK1-202ENST00000392496 KRTAP12-2P59991 146 aa9.7□□□□□ -0.86
SPHK1-202ENST00000392496 LINC01554Q52M75 96 aa9.68□□□□□ -0.86
SPHK1-202ENST00000392496 SPINT4Q6UDR6 99 aa9.67□□□□□ -0.86
SPHK1-202ENST00000392496 KRTAP9-8Q9BYQ0 159 aa9.55□□□□□ -0.88
SPHK1-202ENST00000392496 MT2AP02795 61 aa9.55□□□□□ -0.88
SPHK1-202ENST00000392496 ROMO1P60602 79 aa9.5□□□□□ -0.89
SPHK1-202ENST00000392496 MT1FP04733 61 aa9.49□□□□□ -0.89
SPHK1-202ENST00000392496 SPRR2GQ9BYE4 73 aa9.47□□□□□ -0.89
SPHK1-202ENST00000392496 KRTAP10-10P60014 251 aa9.47□□□□□ -0.89
SPHK1-202ENST00000392496 PRAC1Q96KF2 57 aa9.43□□□□□ -0.9
SPHK1-202ENST00000392496 KRTAP19-1Q8IUB9 90 aa9.41□□□□□ -0.9
SPHK1-202ENST00000392496 CAMK2N1Q7Z7J9 78 aa9.27□□□□□ -0.92
SPHK1-202ENST00000392496 PLAC4Q8WY50 150 aa9.21□□□□□ -0.94
SPHK1-202ENST00000392496 KRTAP19-8Q3LI54 63 aa9.2□□□□□ -0.94
SPHK1-202ENST00000392496 KRTAP9-3Q9BYQ3 159 aa9.2□□□□□ -0.94
SPHK1-202ENST00000392496 LCE2DQ5TA82 110 aaPredicted RBP9.19□□□□□ -0.94
SPHK1-202ENST00000392496 C10orf95Q9H7T3 257 aa9.19□□□□□ -0.94
SPHK1-202ENST00000392496 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
SPHK1-202ENST00000392496 KRTAP9-2Q9BYQ4 174 aa9.1□□□□□ -0.95
SPHK1-202ENST00000392496 MT1BP07438 61 aa9.04□□□□□ -0.96
SPHK1-202ENST00000392496 LCE2BO14633 110 aa8.9□□□□□ -0.98
SPHK1-202ENST00000392496 TNP1P09430 55 aa8.87□□□□□ -0.99
SPHK1-202ENST00000392496 FSIP2Q5CZC0 6907 aa8.8□□□□□ -1
SPHK1-202ENST00000392496 MT1XP80297 61 aa8.79□□□□□ -1
SPHK1-202ENST00000392496 KRTAP10-5P60370 271 aa8.78□□□□□ -1
SPHK1-202ENST00000392496 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
SPHK1-202ENST00000392496 CRCT1Q9UGL9 99 aa8.73□□□□□ -1.01
SPHK1-202ENST00000392496 USH2AO75445 5202 aa8.73□□□□□ -1.01
SPHK1-202ENST00000392496 KRTAP23-1A1A580 65 aa8.7□□□□□ -1.02
SPHK1-202ENST00000392496 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
SPHK1-202ENST00000392496 KRTAP9-6A0A140TA67 174 aa8.62□□□□□ -1.03
SPHK1-202ENST00000392496 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
SPHK1-202ENST00000392496 SSPOA2VEC9 5147 aa8.52□□□□□ -1.05
SPHK1-202ENST00000392496 KRTAP10-7P60409 375 aaPredicted RBP8.45□□□□□ -1.06
SPHK1-202ENST00000392496 LCE3AQ5TA76 89 aa8.45□□□□□ -1.06
SPHK1-202ENST00000392496 KRTAP10-12P60413 245 aa8.41□□□□□ -1.06
SPHK1-202ENST00000392496 KRTAP8-1Q8IUC2 63 aa8.31□□□□□ -1.08
SPHK1-202ENST00000392496 FCGBPQ9Y6R7 5405 aaPredicted RBP8.31□□□□□ -1.08
SPHK1-202ENST00000392496 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
SPHK1-202ENST00000392496 KRTAP12-3P60328 96 aa8.11□□□□□ -1.11
SPHK1-202ENST00000392496 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
SPHK1-202ENST00000392496 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
SPHK1-202ENST00000392496 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
SPHK1-202ENST00000392496 MACF1Q9UPN3 7388 aaKnown RBP8□□□□□ -1.13
SPHK1-202ENST00000392496 KRTAP19-5Q3LI72 72 aa7.99□□□□□ -1.13
SPHK1-202ENST00000392496 KMT2DO14686 5537 aa7.97□□□□□ -1.13
SPHK1-202ENST00000392496 KRTAP19-7Q3SYF9 63 aa7.84□□□□□ -1.15
SPHK1-202ENST00000392496 SPRR5A0A1B0GTR4 108 aa7.84□□□□□ -1.15
SPHK1-202ENST00000392496 KRTAP9-7A8MTY7 169 aa7.82□□□□□ -1.16
SPHK1-202ENST00000392496 SYNE2Q8WXH0 6885 aaKnown RBP7.82□□□□□ -1.16
SPHK1-202ENST00000392496 KRTAP6-3Q3LI67 103 aa7.76□□□□□ -1.17
SPHK1-202ENST00000392496 MT1EP04732 61 aa7.69□□□□□ -1.18
SPHK1-202ENST00000392496 LUZP6Q538Z0 58 aa7.65□□□□□ -1.18
SPHK1-202ENST00000392496 KRTAP5-9P26371 169 aa7.61□□□□□ -1.19
SPHK1-202ENST00000392496 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms