RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 C1orf64Q8NEQ6 169 aa12.1□□□□□ -0.47
NPHP3-202ENST00000383282 C5orf47Q569G3 176 aa12.09□□□□□ -0.47
NPHP3-202ENST00000383282 LINC00208Q96KT6 92 aa12.09□□□□□ -0.47
NPHP3-202ENST00000383282 SMIM20Q8N5G0 67 aa12.03□□□□□ -0.48
NPHP3-202ENST00000383282 A6NN06 94 aa12.01□□□□□ -0.49
NPHP3-202ENST00000383282 H3BPC8 53 aa12□□□□□ -0.49
NPHP3-202ENST00000383282 S4R3F8 94 aa11.99□□□□□ -0.49
NPHP3-202ENST00000383282 TRAV7A0A075B6U4 112 aa11.96□□□□□ -0.49
NPHP3-202ENST00000383282 Q5VV11 94 aa11.96□□□□□ -0.49
NPHP3-202ENST00000383282 CSAG1Q6PB30 78 aa11.95□□□□□ -0.5
NPHP3-202ENST00000383282 KRTAP3-1Q9BYR8 98 aa11.92□□□□□ -0.5
NPHP3-202ENST00000383282 MT1BP07438 61 aa11.91□□□□□ -0.5
NPHP3-202ENST00000383282 KLKP1Q107X0 134 aa11.89□□□□□ -0.51
NPHP3-202ENST00000383282 NEBP20929 6669 aa11.88□□□□□ -0.51
NPHP3-202ENST00000383282 LCA10Q71F78 164 aa11.87□□□□□ -0.51
NPHP3-202ENST00000383282 SPRR2GQ9BYE4 73 aa11.87□□□□□ -0.51
NPHP3-202ENST00000383282 KRTAP19-8Q3LI54 63 aa11.86□□□□□ -0.51
NPHP3-202ENST00000383282 MUC12Q9UKN1 5478 aa11.8□□□□□ -0.52
NPHP3-202ENST00000383282 SERP2Q8N6R1 65 aa11.76□□□□□ -0.53
NPHP3-202ENST00000383282 A8MUN3 132 aa11.75□□□□□ -0.53
NPHP3-202ENST00000383282 KRTAP10-5P60370 271 aa11.75□□□□□ -0.53
NPHP3-202ENST00000383282 SNURFQ9Y675 71 aa11.67□□□□□ -0.54
NPHP3-202ENST00000383282 C20orf197Q8N268 126 aa11.65□□□□□ -0.54
NPHP3-202ENST00000383282 KRTAP3-3Q9BYR6 98 aa11.62□□□□□ -0.55
NPHP3-202ENST00000383282 CRIPTQ9P021 101 aa11.6□□□□□ -0.55
NPHP3-202ENST00000383282 DMAC1Q96GE9 116 aa11.59□□□□□ -0.55
NPHP3-202ENST00000383282 NDUFC1O43677 76 aa11.57□□□□□ -0.56
NPHP3-202ENST00000383282 KRTAP20-1Q3LI63 56 aa11.57□□□□□ -0.56
NPHP3-202ENST00000383282 KRTAP5-9P26371 169 aa11.56□□□□□ -0.56
NPHP3-202ENST00000383282 COX7CP15954 63 aa11.55□□□□□ -0.56
NPHP3-202ENST00000383282 ANAPC13Q9BS18 74 aa11.48□□□□□ -0.57
NPHP3-202ENST00000383282 ACYP2P14621 99 aa11.46□□□□□ -0.57
NPHP3-202ENST00000383282 KMT2DO14686 5537 aa11.45□□□□□ -0.58
NPHP3-202ENST00000383282 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
NPHP3-202ENST00000383282 MDN1Q9NU22 5596 aa11.4□□□□□ -0.58
NPHP3-202ENST00000383282 H0YAA0 97 aa11.34□□□□□ -0.59
NPHP3-202ENST00000383282 CHKB-CPT1BH3BT56 60 aa11.31□□□□□ -0.6
NPHP3-202ENST00000383282 SPTSSBQ8NFR3 76 aa11.27□□□□□ -0.61
NPHP3-202ENST00000383282 PRO2289Q9P1D8 64 aa11.24□□□□□ -0.61
NPHP3-202ENST00000383282 H7BZZ5 65 aa11.22□□□□□ -0.61
NPHP3-202ENST00000383282 CYSTM1Q9H1C7 97 aa11.22□□□□□ -0.61
NPHP3-202ENST00000383282 ADM2Q7Z4H4 148 aa11.21□□□□□ -0.61
NPHP3-202ENST00000383282 CCDC179H3BU77 68 aa11.17□□□□□ -0.62
NPHP3-202ENST00000383282 KRTAP2-3P0C7H8 128 aa11.17□□□□□ -0.62
NPHP3-202ENST00000383282 SPRR2FQ96RM1 72 aa11.17□□□□□ -0.62
NPHP3-202ENST00000383282 KRTAP2-4Q9BYR9 128 aa11.17□□□□□ -0.62
NPHP3-202ENST00000383282 PLAC4Q8WY50 150 aa11.11□□□□□ -0.63
NPHP3-202ENST00000383282 SPRR2EP22531 72 aa11.09□□□□□ -0.63
NPHP3-202ENST00000383282 SPRR2BP35325 72 aa11.09□□□□□ -0.63
NPHP3-202ENST00000383282 SPRR2AP35326 72 aa11.09□□□□□ -0.63
NPHP3-202ENST00000383282 COA5Q86WW8 74 aa11.09□□□□□ -0.63
NPHP3-202ENST00000383282 MT1XP80297 61 aa11.08□□□□□ -0.64
NPHP3-202ENST00000383282 KRTAP8-1Q8IUC2 63 aa11.02□□□□□ -0.65
NPHP3-202ENST00000383282 R4GN34 69 aa11□□□□□ -0.65
NPHP3-202ENST00000383282 P0C880 135 aa10.96□□□□□ -0.65
NPHP3-202ENST00000383282 ATP5EP56381 51 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-202ENST00000383282 KRTAP12-2P59991 146 aa10.92□□□□□ -0.66
NPHP3-202ENST00000383282 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
NPHP3-202ENST00000383282 M0QZ58 72 aa10.88□□□□□ -0.67
NPHP3-202ENST00000383282 LCE1AQ5T7P2 110 aa10.86□□□□□ -0.67
NPHP3-202ENST00000383282 TMEM258P61165 79 aa10.83□□□□□ -0.68
NPHP3-202ENST00000383282 KRTAP2-2Q9BYT5 123 aa10.8□□□□□ -0.68
NPHP3-202ENST00000383282 KRTAP2-1Q9BYU5 128 aa10.8□□□□□ -0.68
NPHP3-202ENST00000383282 SEC61GP60059 68 aa10.77□□□□□ -0.69
NPHP3-202ENST00000383282 LINC01554Q52M75 96 aa10.75□□□□□ -0.69
NPHP3-202ENST00000383282 SPRR2DP22532 72 aa10.74□□□□□ -0.69
NPHP3-202ENST00000383282 KRTAP4-8A0A0G2JLE6 195 aa10.72□□□□□ -0.69
NPHP3-202ENST00000383282 KRTAP4-8Q9BYQ9 185 aa10.72□□□□□ -0.69
NPHP3-202ENST00000383282 SERP1Q9Y6X1 66 aa10.72□□□□□ -0.69
NPHP3-202ENST00000383282 KRTAP10-7P60409 375 aaPredicted RBP10.58□□□□□ -0.72
NPHP3-202ENST00000383282 A0A1B0GU69 56 aa10.55□□□□□ -0.72
NPHP3-202ENST00000383282 KRTAP10-12P60413 245 aa10.53□□□□□ -0.72
NPHP3-202ENST00000383282 PCP4P48539 62 aa10.51□□□□□ -0.73
NPHP3-202ENST00000383282 A0A1B0GU33 70 aa10.46□□□□□ -0.73
NPHP3-202ENST00000383282 LCE3BQ5TA77 95 aa10.45□□□□□ -0.74
NPHP3-202ENST00000383282 KRTAP13-4Q3LI77 160 aa10.44□□□□□ -0.74
NPHP3-202ENST00000383282 PRR15LQ9BU68 103 aa10.43□□□□□ -0.74
NPHP3-202ENST00000383282 LINC01558Q9Y6Z2 57 aa10.37□□□□□ -0.75
NPHP3-202ENST00000383282 SPATA8Q6RVD6 105 aa10.34□□□□□ -0.75
NPHP3-202ENST00000383282 A0A0D9SG42 100 aa10.28□□□□□ -0.76
NPHP3-202ENST00000383282 SMIM26A0A096LP01 95 aa10.19□□□□□ -0.78
NPHP3-202ENST00000383282 V9GYY9 64 aa10.17□□□□□ -0.78
NPHP3-202ENST00000383282 CAMK2N1Q7Z7J9 78 aa10.13□□□□□ -0.79
NPHP3-202ENST00000383282 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
NPHP3-202ENST00000383282 UQCR11O14957 56 aa10.06□□□□□ -0.8
NPHP3-202ENST00000383282 Q1T7F1 81 aa10.06□□□□□ -0.8
NPHP3-202ENST00000383282 A8MU10 97 aa10.05□□□□□ -0.8
NPHP3-202ENST00000383282 KRTAP12-1P59990 96 aa10.02□□□□□ -0.81
NPHP3-202ENST00000383282 RPS28P62857 69 aaKnown RBP10.02□□□□□ -0.81
NPHP3-202ENST00000383282 PSPHP1O15172 72 aa10□□□□□ -0.81
NPHP3-202ENST00000383282 DSTQ03001 7570 aaKnown RBP9.97□□□□□ -0.81
NPHP3-202ENST00000383282 LCE5AQ5TCM9 118 aa9.93□□□□□ -0.82
NPHP3-202ENST00000383282 KRTAP19-7Q3SYF9 63 aa9.9□□□□□ -0.82
NPHP3-202ENST00000383282 MIR22HGQ0VDD5 57 aa9.88□□□□□ -0.83
NPHP3-202ENST00000383282 KRTAP19-3Q7Z4W3 81 aa9.88□□□□□ -0.83
NPHP3-202ENST00000383282 GPR98Q8WXG9 6306 aa9.87□□□□□ -0.83
NPHP3-202ENST00000383282 MT1EP04732 61 aa9.86□□□□□ -0.83
NPHP3-202ENST00000383282 KRTAP4-9Q9BYQ8 210 aa9.8□□□□□ -0.84
NPHP3-202ENST00000383282 A6NED7 52 aa9.73□□□□□ -0.85
NPHP3-202ENST00000383282 K7ERS5 55 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms