RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
CDKL5-202ENST00000379996 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
CDKL5-202ENST00000379996 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
CDKL5-202ENST00000379996 LCA10Q71F78 164 aa4.31□□□□□ -1.72
CDKL5-202ENST00000379996 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
CDKL5-202ENST00000379996 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
CDKL5-202ENST00000379996 DMAC1Q96GE9 116 aa4.29□□□□□ -1.72
CDKL5-202ENST00000379996 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
CDKL5-202ENST00000379996 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
CDKL5-202ENST00000379996 NDUFS5O43920 106 aa4.27□□□□□ -1.73
CDKL5-202ENST00000379996 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
CDKL5-202ENST00000379996 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
CDKL5-202ENST00000379996 LINC00313P59037 77 aa4.24□□□□□ -1.73
CDKL5-202ENST00000379996 A6NN06 94 aa4.24□□□□□ -1.73
CDKL5-202ENST00000379996 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
CDKL5-202ENST00000379996 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
CDKL5-202ENST00000379996 FLG2Q5D862 2391 aaPredicted RBP4.23□□□□□ -1.73
CDKL5-202ENST00000379996 SPINK7P58062 85 aa4.23□□□□□ -1.73
CDKL5-202ENST00000379996 ATP11AUNQ6ZP68 121 aa4.21□□□□□ -1.74
CDKL5-202ENST00000379996 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
CDKL5-202ENST00000379996 ACYP2P14621 99 aa4.2□□□□□ -1.74
CDKL5-202ENST00000379996 TPRXLQ17RH7 258 aa4.2□□□□□ -1.74
CDKL5-202ENST00000379996 A6NED7 52 aa4.17□□□□□ -1.74
CDKL5-202ENST00000379996 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
CDKL5-202ENST00000379996 RETNLBQ9BQ08 111 aa4.14□□□□□ -1.75
CDKL5-202ENST00000379996 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
CDKL5-202ENST00000379996 C20orf166-AS1Q96NR2 134 aa4.13□□□□□ -1.75
CDKL5-202ENST00000379996 A8MUU9 505 aa4.12□□□□□ -1.75
CDKL5-202ENST00000379996 SPATA8Q6RVD6 105 aa4.12□□□□□ -1.75
CDKL5-202ENST00000379996 RBM12B-AS1Q9P1G2 102 aa4.12□□□□□ -1.75
CDKL5-202ENST00000379996 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
CDKL5-202ENST00000379996 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
CDKL5-202ENST00000379996 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
CDKL5-202ENST00000379996 C7orf65Q6ZTY9 151 aa4.07□□□□□ -1.76
CDKL5-202ENST00000379996 SPTSSBQ8NFR3 76 aa4.07□□□□□ -1.76
CDKL5-202ENST00000379996 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
CDKL5-202ENST00000379996 A0A1B0GU69 56 aa4.06□□□□□ -1.76
CDKL5-202ENST00000379996 HERC1Q15751 4861 aa4.06□□□□□ -1.76
CDKL5-202ENST00000379996 DMBT1Q9UGM3 2413 aaPredicted RBP4.05□□□□□ -1.76
CDKL5-202ENST00000379996 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
CDKL5-202ENST00000379996 LPAP08519 4548 aa4.02□□□□□ -1.77
CDKL5-202ENST00000379996 UQCR11O14957 56 aa4□□□□□ -1.77
CDKL5-202ENST00000379996 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
CDKL5-202ENST00000379996 H0YAA0 97 aa3.99□□□□□ -1.77
CDKL5-202ENST00000379996 ADM2Q7Z4H4 148 aa3.97□□□□□ -1.77
CDKL5-202ENST00000379996 LRP2P98164 4655 aa3.96□□□□□ -1.77
CDKL5-202ENST00000379996 COX6B2Q6YFQ2 88 aa3.92□□□□□ -1.78
CDKL5-202ENST00000379996 H1FX-AS1Q4G0G2 97 aa3.9□□□□□ -1.78
CDKL5-202ENST00000379996 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
CDKL5-202ENST00000379996 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
CDKL5-202ENST00000379996 KRTAP19-2Q3LHN2 52 aa3.86□□□□□ -1.79
CDKL5-202ENST00000379996 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
CDKL5-202ENST00000379996 A0A1B0GU33 70 aa3.86□□□□□ -1.79
CDKL5-202ENST00000379996 KRTAP13-4Q3LI77 160 aa3.84□□□□□ -1.8
CDKL5-202ENST00000379996 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
CDKL5-202ENST00000379996 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
CDKL5-202ENST00000379996 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
CDKL5-202ENST00000379996 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
CDKL5-202ENST00000379996 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
CDKL5-202ENST00000379996 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
CDKL5-202ENST00000379996 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
CDKL5-202ENST00000379996 S4R3F8 94 aa3.75□□□□□ -1.81
CDKL5-202ENST00000379996 P0C880 135 aa3.74□□□□□ -1.81
CDKL5-202ENST00000379996 MUC2Q02817 5179 aa3.72□□□□□ -1.81
CDKL5-202ENST00000379996 MT1HP80294 61 aa3.7□□□□□ -1.82
CDKL5-202ENST00000379996 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
CDKL5-202ENST00000379996 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
CDKL5-202ENST00000379996 ROMO1P60602 79 aa3.67□□□□□ -1.82
CDKL5-202ENST00000379996 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
CDKL5-202ENST00000379996 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
CDKL5-202ENST00000379996 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
CDKL5-202ENST00000379996 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
CDKL5-202ENST00000379996 K7ERS5 55 aa3.6□□□□□ -1.83
CDKL5-202ENST00000379996 A0A0D9SG42 100 aa3.6□□□□□ -1.83
CDKL5-202ENST00000379996 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
CDKL5-202ENST00000379996 CRIPTQ9P021 101 aa3.59□□□□□ -1.83
CDKL5-202ENST00000379996 M0QZ58 72 aa3.58□□□□□ -1.84
CDKL5-202ENST00000379996 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CDKL5-202ENST00000379996 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
CDKL5-202ENST00000379996 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
CDKL5-202ENST00000379996 C10orf95Q9H7T3 257 aa3.54□□□□□ -1.84
CDKL5-202ENST00000379996 M0R2T5 61 aa3.53□□□□□ -1.84
CDKL5-202ENST00000379996 MT2AP02795 61 aa3.52□□□□□ -1.85
CDKL5-202ENST00000379996 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
CDKL5-202ENST00000379996 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
CDKL5-202ENST00000379996 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
CDKL5-202ENST00000379996 MT1FP04733 61 aa3.48□□□□□ -1.85
CDKL5-202ENST00000379996 SPINT4Q6UDR6 99 aa3.46□□□□□ -1.86
CDKL5-202ENST00000379996 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
CDKL5-202ENST00000379996 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
CDKL5-202ENST00000379996 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
CDKL5-202ENST00000379996 R4GN34 69 aa3.41□□□□□ -1.86
CDKL5-202ENST00000379996 KRTAP19-8Q3LI54 63 aa3.38□□□□□ -1.87
CDKL5-202ENST00000379996 MT3P25713 68 aa3.32□□□□□ -1.88
CDKL5-202ENST00000379996 MT1BP07438 61 aa3.29□□□□□ -1.88
CDKL5-202ENST00000379996 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CDKL5-202ENST00000379996 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
CDKL5-202ENST00000379996 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
CDKL5-202ENST00000379996 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
CDKL5-202ENST00000379996 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms