RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 ACYP2P14621 99 aa7.76□□□□□ -1.17
CCDC107-204ENST00000378409 S4R3F8 94 aa7.76□□□□□ -1.17
CCDC107-204ENST00000378409 RPS28P62857 69 aaKnown RBP7.75□□□□□ -1.17
CCDC107-204ENST00000378409 FLGP20930 4061 aaPredicted RBP7.74□□□□□ -1.17
CCDC107-204ENST00000378409 MT1HP80294 61 aa7.73□□□□□ -1.17
CCDC107-204ENST00000378409 LCA10Q71F78 164 aa7.7□□□□□ -1.18
CCDC107-204ENST00000378409 COA5Q86WW8 74 aa7.7□□□□□ -1.18
CCDC107-204ENST00000378409 M0R2T5 61 aa7.68□□□□□ -1.18
CCDC107-204ENST00000378409 CHKB-CPT1BH3BT56 60 aa7.65□□□□□ -1.18
CCDC107-204ENST00000378409 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
CCDC107-204ENST00000378409 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
CCDC107-204ENST00000378409 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.19
CCDC107-204ENST00000378409 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
CCDC107-204ENST00000378409 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
CCDC107-204ENST00000378409 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
CCDC107-204ENST00000378409 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
CCDC107-204ENST00000378409 V9GYY9 64 aa7.47□□□□□ -1.21
CCDC107-204ENST00000378409 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
CCDC107-204ENST00000378409 FSIP2Q5CZC0 6907 aa7.45□□□□□ -1.22
CCDC107-204ENST00000378409 Q1T7F1 81 aa7.43□□□□□ -1.22
CCDC107-204ENST00000378409 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.22
CCDC107-204ENST00000378409 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.22
CCDC107-204ENST00000378409 H0YAA0 97 aa7.38□□□□□ -1.23
CCDC107-204ENST00000378409 MT2AP02795 61 aa7.38□□□□□ -1.23
CCDC107-204ENST00000378409 ADM2Q7Z4H4 148 aa7.37□□□□□ -1.23
CCDC107-204ENST00000378409 MT1FP04733 61 aa7.32□□□□□ -1.24
CCDC107-204ENST00000378409 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
CCDC107-204ENST00000378409 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
CCDC107-204ENST00000378409 A0A1B0GU69 56 aa7.3□□□□□ -1.24
CCDC107-204ENST00000378409 SEC61GP60059 68 aa7.3□□□□□ -1.24
CCDC107-204ENST00000378409 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
CCDC107-204ENST00000378409 PSPHP1O15172 72 aa7.28□□□□□ -1.24
CCDC107-204ENST00000378409 P0C880 135 aa7.28□□□□□ -1.24
CCDC107-204ENST00000378409 Q5VV11 94 aa7.22□□□□□ -1.25
CCDC107-204ENST00000378409 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
CCDC107-204ENST00000378409 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
CCDC107-204ENST00000378409 R4GN34 69 aa7.13□□□□□ -1.27
CCDC107-204ENST00000378409 M0QZ58 72 aa7.11□□□□□ -1.27
CCDC107-204ENST00000378409 A0A1B0GU33 70 aa7.1□□□□□ -1.27
CCDC107-204ENST00000378409 A6NED7 52 aa7.1□□□□□ -1.27
CCDC107-204ENST00000378409 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
CCDC107-204ENST00000378409 UQCR11O14957 56 aa7.08□□□□□ -1.28
CCDC107-204ENST00000378409 KRTAP19-1Q8IUB9 90 aa7.08□□□□□ -1.28
CCDC107-204ENST00000378409 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
CCDC107-204ENST00000378409 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.06□□□□□ -1.28
CCDC107-204ENST00000378409 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
CCDC107-204ENST00000378409 SPATA8Q6RVD6 105 aa7.01□□□□□ -1.29
CCDC107-204ENST00000378409 LCE2BO14633 110 aa7□□□□□ -1.29
CCDC107-204ENST00000378409 LINC01554Q52M75 96 aa7□□□□□ -1.29
CCDC107-204ENST00000378409 MIR22HGQ0VDD5 57 aa6.99□□□□□ -1.29
CCDC107-204ENST00000378409 BRK1Q8WUW1 75 aa6.98□□□□□ -1.29
CCDC107-204ENST00000378409 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
CCDC107-204ENST00000378409 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
CCDC107-204ENST00000378409 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
CCDC107-204ENST00000378409 A0A0D9SG42 100 aa6.91□□□□□ -1.3
CCDC107-204ENST00000378409 USH2AO75445 5202 aa6.91□□□□□ -1.3
CCDC107-204ENST00000378409 A8MU10 97 aa6.87□□□□□ -1.31
CCDC107-204ENST00000378409 MT1BP07438 61 aa6.86□□□□□ -1.31
CCDC107-204ENST00000378409 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
CCDC107-204ENST00000378409 PRO0628Q9UI54 55 aa6.82□□□□□ -1.32
CCDC107-204ENST00000378409 A6NN06 94 aa6.81□□□□□ -1.32
CCDC107-204ENST00000378409 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
CCDC107-204ENST00000378409 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
CCDC107-204ENST00000378409 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
CCDC107-204ENST00000378409 K7ERS5 55 aa6.73□□□□□ -1.33
CCDC107-204ENST00000378409 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
CCDC107-204ENST00000378409 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
CCDC107-204ENST00000378409 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
CCDC107-204ENST00000378409 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
CCDC107-204ENST00000378409 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
CCDC107-204ENST00000378409 PMAIP1Q13794 54 aa6.6□□□□□ -1.35
CCDC107-204ENST00000378409 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
CCDC107-204ENST00000378409 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
CCDC107-204ENST00000378409 MT1XP80297 61 aa6.58□□□□□ -1.36
CCDC107-204ENST00000378409 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
CCDC107-204ENST00000378409 KRTAP6-3Q3LI67 103 aa6.44□□□□□ -1.38
CCDC107-204ENST00000378409 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
CCDC107-204ENST00000378409 ROMO1P60602 79 aa6.4□□□□□ -1.38
CCDC107-204ENST00000378409 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
CCDC107-204ENST00000378409 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
CCDC107-204ENST00000378409 TNP1P09430 55 aa6.27□□□□□ -1.41
CCDC107-204ENST00000378409 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
CCDC107-204ENST00000378409 NEBP20929 6669 aa6.23□□□□□ -1.41
CCDC107-204ENST00000378409 MUC12Q9UKN1 5478 aa6.21□□□□□ -1.42
CCDC107-204ENST00000378409 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
CCDC107-204ENST00000378409 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
CCDC107-204ENST00000378409 PRAC1Q96KF2 57 aa6.15□□□□□ -1.42
CCDC107-204ENST00000378409 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
CCDC107-204ENST00000378409 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
CCDC107-204ENST00000378409 KMT2DO14686 5537 aa6.06□□□□□ -1.44
CCDC107-204ENST00000378409 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
CCDC107-204ENST00000378409 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
CCDC107-204ENST00000378409 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
CCDC107-204ENST00000378409 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
CCDC107-204ENST00000378409 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
CCDC107-204ENST00000378409 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
CCDC107-204ENST00000378409 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
CCDC107-204ENST00000378409 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
CCDC107-204ENST00000378409 KRTAP2-3P0C7H8 128 aa5.88□□□□□ -1.47
CCDC107-204ENST00000378409 KRTAP2-4Q9BYR9 128 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms