RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SERP1Q9Y6X1 66 aa6.47□□□□□ -1.37
CKAP2-202ENST00000378034 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.37
CKAP2-202ENST00000378034 MP68P56378 58 aa6.44□□□□□ -1.38
CKAP2-202ENST00000378034 C5orf47Q569G3 176 aa6.44□□□□□ -1.38
CKAP2-202ENST00000378034 C1orf64Q8NEQ6 169 aa6.44□□□□□ -1.38
CKAP2-202ENST00000378034 KRTAP9-2Q9BYQ4 174 aa6.44□□□□□ -1.38
CKAP2-202ENST00000378034 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
CKAP2-202ENST00000378034 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
CKAP2-202ENST00000378034 LINC00208Q96KT6 92 aa6.4□□□□□ -1.38
CKAP2-202ENST00000378034 H3BPC8 53 aa6.4□□□□□ -1.39
CKAP2-202ENST00000378034 SVIPQ8NHG7 77 aa6.36□□□□□ -1.39
CKAP2-202ENST00000378034 MT2AP02795 61 aa6.35□□□□□ -1.39
CKAP2-202ENST00000378034 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
CKAP2-202ENST00000378034 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
CKAP2-202ENST00000378034 S4R3F8 94 aa6.34□□□□□ -1.39
CKAP2-202ENST00000378034 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
CKAP2-202ENST00000378034 A8MUN3 132 aa6.3□□□□□ -1.4
CKAP2-202ENST00000378034 MT1FP04733 61 aa6.29□□□□□ -1.4
CKAP2-202ENST00000378034 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
CKAP2-202ENST00000378034 LCA10Q71F78 164 aa6.28□□□□□ -1.4
CKAP2-202ENST00000378034 CSAG1Q6PB30 78 aa6.27□□□□□ -1.4
CKAP2-202ENST00000378034 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
CKAP2-202ENST00000378034 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
CKAP2-202ENST00000378034 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
CKAP2-202ENST00000378034 Q1T7F1 81 aa6.15□□□□□ -1.43
CKAP2-202ENST00000378034 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
CKAP2-202ENST00000378034 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
CKAP2-202ENST00000378034 ACYP2P14621 99 aa6.09□□□□□ -1.43
CKAP2-202ENST00000378034 H0YAA0 97 aa6.09□□□□□ -1.43
CKAP2-202ENST00000378034 V9GYY9 64 aa6.09□□□□□ -1.43
CKAP2-202ENST00000378034 COA5Q86WW8 74 aa6.07□□□□□ -1.44
CKAP2-202ENST00000378034 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
CKAP2-202ENST00000378034 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
CKAP2-202ENST00000378034 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
CKAP2-202ENST00000378034 KRTAP4-12Q9BQ66 201 aa6.02□□□□□ -1.45
CKAP2-202ENST00000378034 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
CKAP2-202ENST00000378034 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
CKAP2-202ENST00000378034 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
CKAP2-202ENST00000378034 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
CKAP2-202ENST00000378034 PSPHP1O15172 72 aa6□□□□□ -1.45
CKAP2-202ENST00000378034 USH2AO75445 5202 aa6□□□□□ -1.45
CKAP2-202ENST00000378034 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
CKAP2-202ENST00000378034 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
CKAP2-202ENST00000378034 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
CKAP2-202ENST00000378034 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
CKAP2-202ENST00000378034 Q5VV11 94 aa5.97□□□□□ -1.45
CKAP2-202ENST00000378034 CHKB-CPT1BH3BT56 60 aa5.97□□□□□ -1.45
CKAP2-202ENST00000378034 PRR15LQ9BU68 103 aa5.94□□□□□ -1.46
CKAP2-202ENST00000378034 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
CKAP2-202ENST00000378034 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
CKAP2-202ENST00000378034 SSPOA2VEC9 5147 aa5.9□□□□□ -1.47
CKAP2-202ENST00000378034 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
CKAP2-202ENST00000378034 P0C880 135 aa5.86□□□□□ -1.47
CKAP2-202ENST00000378034 MT1BP07438 61 aa5.85□□□□□ -1.47
CKAP2-202ENST00000378034 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.48
CKAP2-202ENST00000378034 R4GN34 69 aa5.83□□□□□ -1.48
CKAP2-202ENST00000378034 A6NED7 52 aa5.82□□□□□ -1.48
CKAP2-202ENST00000378034 A8MU10 97 aa5.79□□□□□ -1.48
CKAP2-202ENST00000378034 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
CKAP2-202ENST00000378034 M0QZ58 72 aa5.78□□□□□ -1.48
CKAP2-202ENST00000378034 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
CKAP2-202ENST00000378034 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
CKAP2-202ENST00000378034 A0A1B0GU69 56 aa5.73□□□□□ -1.49
CKAP2-202ENST00000378034 A6NN06 94 aa5.7□□□□□ -1.5
CKAP2-202ENST00000378034 SEC61GP60059 68 aa5.69□□□□□ -1.5
CKAP2-202ENST00000378034 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
CKAP2-202ENST00000378034 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
CKAP2-202ENST00000378034 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
CKAP2-202ENST00000378034 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
CKAP2-202ENST00000378034 H3BS24 57 aa5.63□□□□□ -1.51
CKAP2-202ENST00000378034 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
CKAP2-202ENST00000378034 UQCR11O14957 56 aa5.62□□□□□ -1.51
CKAP2-202ENST00000378034 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
CKAP2-202ENST00000378034 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
CKAP2-202ENST00000378034 KRTAP4-2Q9BYR5 136 aa5.58□□□□□ -1.52
CKAP2-202ENST00000378034 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
CKAP2-202ENST00000378034 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
CKAP2-202ENST00000378034 KTN1-AS1Q86SY8 53 aa5.57□□□□□ -1.52
CKAP2-202ENST00000378034 A0A1B0GU33 70 aa5.55□□□□□ -1.52
CKAP2-202ENST00000378034 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
CKAP2-202ENST00000378034 MT1XP80297 61 aa5.55□□□□□ -1.52
CKAP2-202ENST00000378034 MACF1Q9UPN3 7388 aaKnown RBP5.51□□□□□ -1.53
CKAP2-202ENST00000378034 KRTAP6-3Q3LI67 103 aa5.44□□□□□ -1.54
CKAP2-202ENST00000378034 A0A0D9SG42 100 aa5.43□□□□□ -1.54
CKAP2-202ENST00000378034 KRTAP12-2P59991 146 aa5.4□□□□□ -1.54
CKAP2-202ENST00000378034 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
CKAP2-202ENST00000378034 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
CKAP2-202ENST00000378034 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
CKAP2-202ENST00000378034 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
CKAP2-202ENST00000378034 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
CKAP2-202ENST00000378034 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
CKAP2-202ENST00000378034 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
CKAP2-202ENST00000378034 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
CKAP2-202ENST00000378034 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
CKAP2-202ENST00000378034 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
CKAP2-202ENST00000378034 K7ERS5 55 aa5.25□□□□□ -1.57
CKAP2-202ENST00000378034 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
CKAP2-202ENST00000378034 KMT2DO14686 5537 aa5.17□□□□□ -1.58
CKAP2-202ENST00000378034 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
CKAP2-202ENST00000378034 ROMO1P60602 79 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms