RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 LINC00208Q96KT6 92 aa7.03□□□□□ -1.28
UBE4B-203ENST00000377153 LCE4AQ5TA78 99 aa7.02□□□□□ -1.29
UBE4B-203ENST00000377153 H3BPC8 53 aa7□□□□□ -1.29
UBE4B-203ENST00000377153 KRTAP9-8Q9BYQ0 159 aa7□□□□□ -1.29
UBE4B-203ENST00000377153 S4R3F8 94 aa7□□□□□ -1.29
UBE4B-203ENST00000377153 FAM236AA0A1B0GUQ0 79 aa6.99□□□□□ -1.29
UBE4B-203ENST00000377153 FAM236BA0A1B0GV22 79 aa6.99□□□□□ -1.29
UBE4B-203ENST00000377153 SMIM20Q8N5G0 67 aa6.99□□□□□ -1.29
UBE4B-203ENST00000377153 MT2AP02795 61 aa6.97□□□□□ -1.29
UBE4B-203ENST00000377153 KRTAP5-3Q6L8H2 238 aa6.97□□□□□ -1.29
UBE4B-203ENST00000377153 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.3
UBE4B-203ENST00000377153 KRTAP10-10P60014 251 aa6.94□□□□□ -1.3
UBE4B-203ENST00000377153 TRAV7A0A075B6U4 112 aa6.91□□□□□ -1.3
UBE4B-203ENST00000377153 A8MUN3 132 aa6.91□□□□□ -1.3
UBE4B-203ENST00000377153 MT1FP04733 61 aa6.91□□□□□ -1.3
UBE4B-203ENST00000377153 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
UBE4B-203ENST00000377153 LCA10Q71F78 164 aa6.91□□□□□ -1.3
UBE4B-203ENST00000377153 KLKP1Q107X0 134 aa6.9□□□□□ -1.3
UBE4B-203ENST00000377153 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
UBE4B-203ENST00000377153 NDUFC1O43677 76 aa6.82□□□□□ -1.32
UBE4B-203ENST00000377153 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
UBE4B-203ENST00000377153 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
UBE4B-203ENST00000377153 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.33
UBE4B-203ENST00000377153 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
UBE4B-203ENST00000377153 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
UBE4B-203ENST00000377153 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
UBE4B-203ENST00000377153 SNURFQ9Y675 71 aa6.73□□□□□ -1.33
UBE4B-203ENST00000377153 C20orf197Q8N268 126 aa6.72□□□□□ -1.33
UBE4B-203ENST00000377153 ACYP2P14621 99 aa6.67□□□□□ -1.34
UBE4B-203ENST00000377153 H0YAA0 97 aa6.64□□□□□ -1.35
UBE4B-203ENST00000377153 COX7CP15954 63 aa6.63□□□□□ -1.35
UBE4B-203ENST00000377153 SPANXA2-OT1Q8N9U9 137 aa6.63□□□□□ -1.35
UBE4B-203ENST00000377153 SPTSSBQ8NFR3 76 aa6.62□□□□□ -1.35
UBE4B-203ENST00000377153 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
UBE4B-203ENST00000377153 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
UBE4B-203ENST00000377153 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
UBE4B-203ENST00000377153 ANAPC13Q9BS18 74 aa6.58□□□□□ -1.36
UBE4B-203ENST00000377153 USH2AO75445 5202 aa6.57□□□□□ -1.36
UBE4B-203ENST00000377153 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
UBE4B-203ENST00000377153 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
UBE4B-203ENST00000377153 Q5VV11 94 aa6.5□□□□□ -1.37
UBE4B-203ENST00000377153 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
UBE4B-203ENST00000377153 H7BZZ5 65 aa6.45□□□□□ -1.38
UBE4B-203ENST00000377153 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
UBE4B-203ENST00000377153 R4GN34 69 aa6.45□□□□□ -1.38
UBE4B-203ENST00000377153 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
UBE4B-203ENST00000377153 P0C880 135 aa6.42□□□□□ -1.38
UBE4B-203ENST00000377153 COA5Q86WW8 74 aa6.42□□□□□ -1.38
UBE4B-203ENST00000377153 CYSTM1Q9H1C7 97 aa6.42□□□□□ -1.38
UBE4B-203ENST00000377153 M0QZ58 72 aa6.39□□□□□ -1.39
UBE4B-203ENST00000377153 MT1BP07438 61 aa6.39□□□□□ -1.39
UBE4B-203ENST00000377153 CCDC179H3BU77 68 aa6.36□□□□□ -1.39
UBE4B-203ENST00000377153 A6NN06 94 aa6.31□□□□□ -1.4
UBE4B-203ENST00000377153 ATP5EP56381 51 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-203ENST00000377153 SEC61GP60059 68 aa6.3□□□□□ -1.4
UBE4B-203ENST00000377153 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-203ENST00000377153 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
UBE4B-203ENST00000377153 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
UBE4B-203ENST00000377153 SERP1Q9Y6X1 66 aa6.26□□□□□ -1.41
UBE4B-203ENST00000377153 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
UBE4B-203ENST00000377153 TMEM258P61165 79 aa6.22□□□□□ -1.41
UBE4B-203ENST00000377153 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
UBE4B-203ENST00000377153 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
UBE4B-203ENST00000377153 A0A1B0GU69 56 aa6.14□□□□□ -1.43
UBE4B-203ENST00000377153 A0A1B0GU33 70 aa6.09□□□□□ -1.43
UBE4B-203ENST00000377153 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
UBE4B-203ENST00000377153 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
UBE4B-203ENST00000377153 MT1XP80297 61 aa6.06□□□□□ -1.44
UBE4B-203ENST00000377153 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
UBE4B-203ENST00000377153 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
UBE4B-203ENST00000377153 A0A0D9SG42 100 aa6□□□□□ -1.45
UBE4B-203ENST00000377153 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
UBE4B-203ENST00000377153 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
UBE4B-203ENST00000377153 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
UBE4B-203ENST00000377153 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
UBE4B-203ENST00000377153 SPINT4Q6UDR6 99 aa5.92□□□□□ -1.46
UBE4B-203ENST00000377153 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
UBE4B-203ENST00000377153 PCP4P48539 62 aa5.89□□□□□ -1.47
UBE4B-203ENST00000377153 V9GYY9 64 aa5.86□□□□□ -1.47
UBE4B-203ENST00000377153 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
UBE4B-203ENST00000377153 A8MU10 97 aa5.83□□□□□ -1.48
UBE4B-203ENST00000377153 UQCR11O14957 56 aa5.83□□□□□ -1.48
UBE4B-203ENST00000377153 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
UBE4B-203ENST00000377153 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
UBE4B-203ENST00000377153 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
UBE4B-203ENST00000377153 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
UBE4B-203ENST00000377153 Q1T7F1 81 aa5.76□□□□□ -1.49
UBE4B-203ENST00000377153 PSPHP1O15172 72 aa5.74□□□□□ -1.49
UBE4B-203ENST00000377153 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
UBE4B-203ENST00000377153 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.5
UBE4B-203ENST00000377153 H3BS24 57 aa5.69□□□□□ -1.5
UBE4B-203ENST00000377153 RPS28P62857 69 aaKnown RBP5.68□□□□□ -1.5
UBE4B-203ENST00000377153 KMT2DO14686 5537 aa5.66□□□□□ -1.5
UBE4B-203ENST00000377153 K7ERS5 55 aa5.64□□□□□ -1.51
UBE4B-203ENST00000377153 NEBP20929 6669 aa5.64□□□□□ -1.51
UBE4B-203ENST00000377153 A6NED7 52 aa5.6□□□□□ -1.51
UBE4B-203ENST00000377153 SPRR2EP22531 72 aa5.58□□□□□ -1.52
UBE4B-203ENST00000377153 SPRR2BP35325 72 aa5.58□□□□□ -1.52
UBE4B-203ENST00000377153 SPRR2AP35326 72 aa5.58□□□□□ -1.52
UBE4B-203ENST00000377153 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms