RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 S4R3F8 94 aa8.99□□□□□ -0.97
CD40-202ENST00000372285 PSPHP1O15172 72 aa8.97□□□□□ -0.97
CD40-202ENST00000372285 LCA10Q71F78 164 aa8.97□□□□□ -0.97
CD40-202ENST00000372285 KRTAP3-3Q9BYR6 98 aa8.97□□□□□ -0.97
CD40-202ENST00000372285 PRR15LQ9BU68 103 aa8.96□□□□□ -0.98
CD40-202ENST00000372285 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
CD40-202ENST00000372285 Q5VV11 94 aa8.91□□□□□ -0.98
CD40-202ENST00000372285 A0A1B0GU69 56 aa8.88□□□□□ -0.99
CD40-202ENST00000372285 SEC61GP60059 68 aa8.8□□□□□ -1
CD40-202ENST00000372285 CSAG1Q6PB30 78 aa8.79□□□□□ -1
CD40-202ENST00000372285 MUC2Q02817 5179 aa8.76□□□□□ -1.01
CD40-202ENST00000372285 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
CD40-202ENST00000372285 UBR4Q5T4S7 5183 aa8.7□□□□□ -1.02
CD40-202ENST00000372285 RNF213Q63HN8 5207 aa8.7□□□□□ -1.02
CD40-202ENST00000372285 A6NED7 52 aa8.69□□□□□ -1.02
CD40-202ENST00000372285 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
CD40-202ENST00000372285 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
CD40-202ENST00000372285 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.03
CD40-202ENST00000372285 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
CD40-202ENST00000372285 H0YAA0 97 aa8.63□□□□□ -1.03
CD40-202ENST00000372285 UQCR11O14957 56 aa8.62□□□□□ -1.03
CD40-202ENST00000372285 A0A1B0GU33 70 aa8.6□□□□□ -1.03
CD40-202ENST00000372285 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
CD40-202ENST00000372285 CDC42SE1Q9NRR8 79 aa8.57□□□□□ -1.04
CD40-202ENST00000372285 P0C880 135 aa8.56□□□□□ -1.04
CD40-202ENST00000372285 SPATA8Q6RVD6 105 aa8.54□□□□□ -1.04
CD40-202ENST00000372285 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
CD40-202ENST00000372285 A8MU10 97 aa8.51□□□□□ -1.05
CD40-202ENST00000372285 PRO0628Q9UI54 55 aa8.49□□□□□ -1.05
CD40-202ENST00000372285 MT1HP80294 61 aa8.48□□□□□ -1.05
CD40-202ENST00000372285 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
CD40-202ENST00000372285 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
CD40-202ENST00000372285 M0R2T5 61 aa8.37□□□□□ -1.07
CD40-202ENST00000372285 M0QZ58 72 aa8.36□□□□□ -1.07
CD40-202ENST00000372285 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
CD40-202ENST00000372285 R4GN34 69 aa8.28□□□□□ -1.08
CD40-202ENST00000372285 A0A0D9SG42 100 aa8.23□□□□□ -1.09
CD40-202ENST00000372285 LCE2DQ5TA82 110 aaPredicted RBP8.23□□□□□ -1.09
CD40-202ENST00000372285 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
CD40-202ENST00000372285 KRTAP9-8Q9BYQ0 159 aa8.19□□□□□ -1.1
CD40-202ENST00000372285 MT2AP02795 61 aa8.17□□□□□ -1.1
CD40-202ENST00000372285 PMAIP1Q13794 54 aa8.17□□□□□ -1.1
CD40-202ENST00000372285 A6NN06 94 aa8.15□□□□□ -1.11
CD40-202ENST00000372285 K7ERS5 55 aa8.12□□□□□ -1.11
CD40-202ENST00000372285 LCE2AQ5TA79 106 aaPredicted RBP8.12□□□□□ -1.11
CD40-202ENST00000372285 MT1FP04733 61 aa8.11□□□□□ -1.11
CD40-202ENST00000372285 LINC01554Q52M75 96 aa8.11□□□□□ -1.11
CD40-202ENST00000372285 KRTAP12-1P59990 96 aa8.1□□□□□ -1.11
CD40-202ENST00000372285 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
CD40-202ENST00000372285 KRTAP12-2P59991 146 aa8.07□□□□□ -1.12
CD40-202ENST00000372285 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
CD40-202ENST00000372285 SPINT4Q6UDR6 99 aa8.03□□□□□ -1.12
CD40-202ENST00000372285 KRTAP19-1Q8IUB9 90 aa8□□□□□ -1.13
CD40-202ENST00000372285 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
CD40-202ENST00000372285 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
CD40-202ENST00000372285 KTN1-AS1Q86SY8 53 aa7.85□□□□□ -1.15
CD40-202ENST00000372285 KRTAP19-8Q3LI54 63 aa7.83□□□□□ -1.16
CD40-202ENST00000372285 ROMO1P60602 79 aa7.81□□□□□ -1.16
CD40-202ENST00000372285 PLAC4Q8WY50 150 aa7.77□□□□□ -1.17
CD40-202ENST00000372285 KRTAP9-2Q9BYQ4 174 aa7.76□□□□□ -1.17
CD40-202ENST00000372285 CAMK2N1Q7Z7J9 78 aa7.75□□□□□ -1.17
CD40-202ENST00000372285 MT1BP07438 61 aa7.71□□□□□ -1.18
CD40-202ENST00000372285 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
CD40-202ENST00000372285 LCE2BO14633 110 aa7.66□□□□□ -1.18
CD40-202ENST00000372285 PRAC1Q96KF2 57 aa7.64□□□□□ -1.19
CD40-202ENST00000372285 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
CD40-202ENST00000372285 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
CD40-202ENST00000372285 MT1XP80297 61 aa7.47□□□□□ -1.21
CD40-202ENST00000372285 KRTAP10-5P60370 271 aa7.46□□□□□ -1.22
CD40-202ENST00000372285 FSIP2Q5CZC0 6907 aa7.45□□□□□ -1.22
CD40-202ENST00000372285 TNP1P09430 55 aa7.4□□□□□ -1.23
CD40-202ENST00000372285 USH2AO75445 5202 aa7.39□□□□□ -1.23
CD40-202ENST00000372285 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
CD40-202ENST00000372285 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
CD40-202ENST00000372285 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
CD40-202ENST00000372285 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
CD40-202ENST00000372285 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
CD40-202ENST00000372285 SSPOA2VEC9 5147 aa7.18□□□□□ -1.26
CD40-202ENST00000372285 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.26
CD40-202ENST00000372285 KRTAP10-12P60413 245 aa7.09□□□□□ -1.27
CD40-202ENST00000372285 LCE3AQ5TA76 89 aa7.08□□□□□ -1.28
CD40-202ENST00000372285 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.29
CD40-202ENST00000372285 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
CD40-202ENST00000372285 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
CD40-202ENST00000372285 FCGBPQ9Y6R7 5405 aaPredicted RBP6.84□□□□□ -1.31
CD40-202ENST00000372285 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
CD40-202ENST00000372285 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
CD40-202ENST00000372285 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
CD40-202ENST00000372285 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
CD40-202ENST00000372285 KMT2DO14686 5537 aa6.73□□□□□ -1.33
CD40-202ENST00000372285 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
CD40-202ENST00000372285 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
CD40-202ENST00000372285 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
CD40-202ENST00000372285 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
CD40-202ENST00000372285 MT1EP04732 61 aa6.54□□□□□ -1.36
CD40-202ENST00000372285 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
CD40-202ENST00000372285 MT1LQ93083 61 aa6.42□□□□□ -1.38
CD40-202ENST00000372285 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
CD40-202ENST00000372285 LCE3CQ5T5A8 94 aa6.37□□□□□ -1.39
CD40-202ENST00000372285 KRTAP6-3Q3LI67 103 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms