RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 C7orf65Q6ZTY9 151 aa8.16□□□□□ -1.1
PFDN4-201ENST00000371419 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
PFDN4-201ENST00000371419 SPINK7P58062 85 aa8.15□□□□□ -1.1
PFDN4-201ENST00000371419 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
PFDN4-201ENST00000371419 COA5Q86WW8 74 aa8.12□□□□□ -1.11
PFDN4-201ENST00000371419 KRTAP9-6A0A140TA67 174 aa8.11□□□□□ -1.11
PFDN4-201ENST00000371419 ACYP2P14621 99 aa8.11□□□□□ -1.11
PFDN4-201ENST00000371419 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
PFDN4-201ENST00000371419 MPLKIPQ8TAP9 179 aa8.08□□□□□ -1.12
PFDN4-201ENST00000371419 RBM12B-AS1Q9P1G2 102 aa8.08□□□□□ -1.12
PFDN4-201ENST00000371419 MT1HP80294 61 aa8.07□□□□□ -1.12
PFDN4-201ENST00000371419 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
PFDN4-201ENST00000371419 V9GYY9 64 aa8.05□□□□□ -1.12
PFDN4-201ENST00000371419 Q1T7F1 81 aa8.03□□□□□ -1.12
PFDN4-201ENST00000371419 A8MUN3 132 aa8□□□□□ -1.13
PFDN4-201ENST00000371419 C4orf26Q17RF5 130 aa8□□□□□ -1.13
PFDN4-201ENST00000371419 M0R2T5 61 aa7.98□□□□□ -1.13
PFDN4-201ENST00000371419 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
PFDN4-201ENST00000371419 LCE3BQ5TA77 95 aa7.92□□□□□ -1.14
PFDN4-201ENST00000371419 KRTAP4-12Q9BQ66 201 aa7.89□□□□□ -1.15
PFDN4-201ENST00000371419 KRTAP10-6P60371 365 aaPredicted RBP7.87□□□□□ -1.15
PFDN4-201ENST00000371419 LINC01558Q9Y6Z2 57 aa7.87□□□□□ -1.15
PFDN4-201ENST00000371419 PSPHP1O15172 72 aa7.83□□□□□ -1.16
PFDN4-201ENST00000371419 H1FX-AS1Q4G0G2 97 aa7.83□□□□□ -1.16
PFDN4-201ENST00000371419 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
PFDN4-201ENST00000371419 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
PFDN4-201ENST00000371419 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
PFDN4-201ENST00000371419 Q5VV11 94 aa7.77□□□□□ -1.17
PFDN4-201ENST00000371419 KRTAP9-9Q9BYP9 154 aa7.75□□□□□ -1.17
PFDN4-201ENST00000371419 KRTAP9-4Q9BYQ2 154 aa7.75□□□□□ -1.17
PFDN4-201ENST00000371419 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
PFDN4-201ENST00000371419 A0A1B0GU69 56 aa7.7□□□□□ -1.18
PFDN4-201ENST00000371419 KRTAP4-8A0A0G2JLE6 195 aa7.69□□□□□ -1.18
PFDN4-201ENST00000371419 KRTAP9-8Q9BYQ0 159 aa7.69□□□□□ -1.18
PFDN4-201ENST00000371419 BRK1Q8WUW1 75 aa7.68□□□□□ -1.18
PFDN4-201ENST00000371419 SEC61GP60059 68 aa7.64□□□□□ -1.19
PFDN4-201ENST00000371419 A6NED7 52 aa7.63□□□□□ -1.19
PFDN4-201ENST00000371419 S4R3F8 94 aa7.63□□□□□ -1.19
PFDN4-201ENST00000371419 MT2AP02795 61 aa7.62□□□□□ -1.19
PFDN4-201ENST00000371419 PRO0628Q9UI54 55 aa7.62□□□□□ -1.19
PFDN4-201ENST00000371419 LCA10Q71F78 164 aa7.58□□□□□ -1.2
PFDN4-201ENST00000371419 MT1FP04733 61 aa7.55□□□□□ -1.2
PFDN4-201ENST00000371419 KRTAP10-10P60014 251 aa7.55□□□□□ -1.2
PFDN4-201ENST00000371419 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
PFDN4-201ENST00000371419 CDC42SE1Q9NRR8 79 aa7.54□□□□□ -1.2
PFDN4-201ENST00000371419 UQCR11O14957 56 aa7.51□□□□□ -1.21
PFDN4-201ENST00000371419 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
PFDN4-201ENST00000371419 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
PFDN4-201ENST00000371419 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
PFDN4-201ENST00000371419 MIR22HGQ0VDD5 57 aa7.43□□□□□ -1.22
PFDN4-201ENST00000371419 A0A1B0GU33 70 aa7.41□□□□□ -1.22
PFDN4-201ENST00000371419 LCE1DQ5T752 114 aa7.41□□□□□ -1.22
PFDN4-201ENST00000371419 SVIPQ8NHG7 77 aa7.4□□□□□ -1.22
PFDN4-201ENST00000371419 A8MU10 97 aa7.39□□□□□ -1.23
PFDN4-201ENST00000371419 FSIP2Q5CZC0 6907 aa7.38□□□□□ -1.23
PFDN4-201ENST00000371419 CRCT1Q9UGL9 99 aa7.31□□□□□ -1.24
PFDN4-201ENST00000371419 H0YAA0 97 aa7.3□□□□□ -1.24
PFDN4-201ENST00000371419 PMAIP1Q13794 54 aa7.28□□□□□ -1.24
PFDN4-201ENST00000371419 ADM2Q7Z4H4 148 aa7.26□□□□□ -1.25
PFDN4-201ENST00000371419 USH2AO75445 5202 aa7.26□□□□□ -1.25
PFDN4-201ENST00000371419 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
PFDN4-201ENST00000371419 P0C880 135 aa7.21□□□□□ -1.26
PFDN4-201ENST00000371419 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
PFDN4-201ENST00000371419 CRIPTQ9P021 101 aa7.2□□□□□ -1.26
PFDN4-201ENST00000371419 A6NN06 94 aa7.19□□□□□ -1.26
PFDN4-201ENST00000371419 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
PFDN4-201ENST00000371419 KRTAP4-2Q9BYR5 136 aa7.15□□□□□ -1.27
PFDN4-201ENST00000371419 M0QZ58 72 aa7.14□□□□□ -1.27
PFDN4-201ENST00000371419 SSPOA2VEC9 5147 aa7.13□□□□□ -1.27
PFDN4-201ENST00000371419 K7ERS5 55 aa7.12□□□□□ -1.27
PFDN4-201ENST00000371419 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
PFDN4-201ENST00000371419 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
PFDN4-201ENST00000371419 MT1BP07438 61 aa7.03□□□□□ -1.28
PFDN4-201ENST00000371419 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
PFDN4-201ENST00000371419 KTN1-AS1Q86SY8 53 aa7.03□□□□□ -1.28
PFDN4-201ENST00000371419 A0A0D9SG42 100 aa7.02□□□□□ -1.29
PFDN4-201ENST00000371419 R4GN34 69 aa7.02□□□□□ -1.29
PFDN4-201ENST00000371419 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
PFDN4-201ENST00000371419 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
PFDN4-201ENST00000371419 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
PFDN4-201ENST00000371419 KRTAP12-1P59990 96 aa6.9□□□□□ -1.31
PFDN4-201ENST00000371419 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
PFDN4-201ENST00000371419 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
PFDN4-201ENST00000371419 SPINT4Q6UDR6 99 aa6.87□□□□□ -1.31
PFDN4-201ENST00000371419 KRTAP12-2P59991 146 aa6.86□□□□□ -1.31
PFDN4-201ENST00000371419 LINC01554Q52M75 96 aa6.85□□□□□ -1.31
PFDN4-201ENST00000371419 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
PFDN4-201ENST00000371419 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
PFDN4-201ENST00000371419 ROMO1P60602 79 aa6.8□□□□□ -1.32
PFDN4-201ENST00000371419 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
PFDN4-201ENST00000371419 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
PFDN4-201ENST00000371419 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
PFDN4-201ENST00000371419 MACF1Q9UPN3 7388 aaKnown RBP6.72□□□□□ -1.33
PFDN4-201ENST00000371419 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
PFDN4-201ENST00000371419 MT1XP80297 61 aa6.66□□□□□ -1.34
PFDN4-201ENST00000371419 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
PFDN4-201ENST00000371419 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
PFDN4-201ENST00000371419 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
PFDN4-201ENST00000371419 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
PFDN4-201ENST00000371419 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms