RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KRTAP4-11Q9BYQ6 195 aa7.15□□□□□ -1.26
COL9A1-204ENST00000370496 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
COL9A1-204ENST00000370496 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
COL9A1-204ENST00000370496 C5orf47Q569G3 176 aa7.14□□□□□ -1.27
COL9A1-204ENST00000370496 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
COL9A1-204ENST00000370496 MT2AP02795 61 aa7.13□□□□□ -1.27
COL9A1-204ENST00000370496 S4R3F8 94 aa7.13□□□□□ -1.27
COL9A1-204ENST00000370496 H3BPC8 53 aa7.1□□□□□ -1.27
COL9A1-204ENST00000370496 MT1FP04733 61 aa7.08□□□□□ -1.28
COL9A1-204ENST00000370496 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
COL9A1-204ENST00000370496 SMIM20Q8N5G0 67 aa7.08□□□□□ -1.28
COL9A1-204ENST00000370496 KLKP1Q107X0 134 aa7.07□□□□□ -1.28
COL9A1-204ENST00000370496 LCA10Q71F78 164 aa7.06□□□□□ -1.28
COL9A1-204ENST00000370496 TRAV7A0A075B6U4 112 aa7.04□□□□□ -1.28
COL9A1-204ENST00000370496 A8MUN3 132 aa7.02□□□□□ -1.29
COL9A1-204ENST00000370496 CSAG1Q6PB30 78 aa7.02□□□□□ -1.29
COL9A1-204ENST00000370496 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
COL9A1-204ENST00000370496 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
COL9A1-204ENST00000370496 NDUFC1O43677 76 aa6.93□□□□□ -1.3
COL9A1-204ENST00000370496 DMAC1Q96GE9 116 aa6.91□□□□□ -1.3
COL9A1-204ENST00000370496 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
COL9A1-204ENST00000370496 SERP2Q8N6R1 65 aa6.9□□□□□ -1.31
COL9A1-204ENST00000370496 FSIP2Q5CZC0 6907 aa6.9□□□□□ -1.31
COL9A1-204ENST00000370496 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
COL9A1-204ENST00000370496 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
COL9A1-204ENST00000370496 KRTAP5-3Q6L8H2 238 aa6.84□□□□□ -1.31
COL9A1-204ENST00000370496 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
COL9A1-204ENST00000370496 USH2AO75445 5202 aa6.78□□□□□ -1.32
COL9A1-204ENST00000370496 ACYP2P14621 99 aa6.78□□□□□ -1.32
COL9A1-204ENST00000370496 COX7CP15954 63 aa6.76□□□□□ -1.33
COL9A1-204ENST00000370496 H0YAA0 97 aa6.75□□□□□ -1.33
COL9A1-204ENST00000370496 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
COL9A1-204ENST00000370496 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
COL9A1-204ENST00000370496 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
COL9A1-204ENST00000370496 CHKB-CPT1BH3BT56 60 aa6.71□□□□□ -1.33
COL9A1-204ENST00000370496 SPTSSBQ8NFR3 76 aa6.69□□□□□ -1.34
COL9A1-204ENST00000370496 ANAPC13Q9BS18 74 aa6.69□□□□□ -1.34
COL9A1-204ENST00000370496 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
COL9A1-204ENST00000370496 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
COL9A1-204ENST00000370496 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
COL9A1-204ENST00000370496 Q5VV11 94 aa6.62□□□□□ -1.35
COL9A1-204ENST00000370496 H7BZZ5 65 aa6.59□□□□□ -1.35
COL9A1-204ENST00000370496 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
COL9A1-204ENST00000370496 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
COL9A1-204ENST00000370496 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
COL9A1-204ENST00000370496 P0C880 135 aa6.57□□□□□ -1.36
COL9A1-204ENST00000370496 COA5Q86WW8 74 aa6.57□□□□□ -1.36
COL9A1-204ENST00000370496 MT1BP07438 61 aa6.56□□□□□ -1.36
COL9A1-204ENST00000370496 R4GN34 69 aa6.56□□□□□ -1.36
COL9A1-204ENST00000370496 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
COL9A1-204ENST00000370496 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
COL9A1-204ENST00000370496 M0QZ58 72 aa6.51□□□□□ -1.37
COL9A1-204ENST00000370496 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
COL9A1-204ENST00000370496 A6NN06 94 aa6.43□□□□□ -1.38
COL9A1-204ENST00000370496 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
COL9A1-204ENST00000370496 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
COL9A1-204ENST00000370496 PLAC4Q8WY50 150 aa6.38□□□□□ -1.39
COL9A1-204ENST00000370496 SEC61GP60059 68 aa6.37□□□□□ -1.39
COL9A1-204ENST00000370496 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
COL9A1-204ENST00000370496 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
COL9A1-204ENST00000370496 TMEM258P61165 79 aa6.32□□□□□ -1.4
COL9A1-204ENST00000370496 PRO2289Q9P1D8 64 aa6.29□□□□□ -1.4
COL9A1-204ENST00000370496 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
COL9A1-204ENST00000370496 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
COL9A1-204ENST00000370496 A0A1B0GU69 56 aa6.23□□□□□ -1.41
COL9A1-204ENST00000370496 MT1XP80297 61 aa6.22□□□□□ -1.41
COL9A1-204ENST00000370496 A0A1B0GU33 70 aa6.19□□□□□ -1.42
COL9A1-204ENST00000370496 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
COL9A1-204ENST00000370496 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.43
COL9A1-204ENST00000370496 PRR15LQ9BU68 103 aa6.15□□□□□ -1.43
COL9A1-204ENST00000370496 A0A0D9SG42 100 aa6.14□□□□□ -1.43
COL9A1-204ENST00000370496 KRTAP6-3Q3LI67 103 aa6.08□□□□□ -1.44
COL9A1-204ENST00000370496 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
COL9A1-204ENST00000370496 LINC01558Q9Y6Z2 57 aa6.08□□□□□ -1.44
COL9A1-204ENST00000370496 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
COL9A1-204ENST00000370496 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
COL9A1-204ENST00000370496 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
COL9A1-204ENST00000370496 PCP4P48539 62 aa6□□□□□ -1.45
COL9A1-204ENST00000370496 A8MU10 97 aa5.98□□□□□ -1.45
COL9A1-204ENST00000370496 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
COL9A1-204ENST00000370496 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
COL9A1-204ENST00000370496 V9GYY9 64 aa5.93□□□□□ -1.46
COL9A1-204ENST00000370496 KMT2DO14686 5537 aa5.92□□□□□ -1.46
COL9A1-204ENST00000370496 UQCR11O14957 56 aa5.92□□□□□ -1.46
COL9A1-204ENST00000370496 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
COL9A1-204ENST00000370496 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
COL9A1-204ENST00000370496 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
COL9A1-204ENST00000370496 Q1T7F1 81 aa5.86□□□□□ -1.47
COL9A1-204ENST00000370496 PSPHP1O15172 72 aa5.85□□□□□ -1.47
COL9A1-204ENST00000370496 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
COL9A1-204ENST00000370496 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
COL9A1-204ENST00000370496 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
COL9A1-204ENST00000370496 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
COL9A1-204ENST00000370496 NEBP20929 6669 aa5.76□□□□□ -1.49
COL9A1-204ENST00000370496 SPRR2EP22531 72 aa5.7□□□□□ -1.5
COL9A1-204ENST00000370496 SPRR2BP35325 72 aa5.7□□□□□ -1.5
COL9A1-204ENST00000370496 SPRR2AP35326 72 aa5.7□□□□□ -1.5
COL9A1-204ENST00000370496 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
COL9A1-204ENST00000370496 A6NED7 52 aa5.69□□□□□ -1.5
COL9A1-204ENST00000370496 K7ERS5 55 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms