RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 KRTAP9-3Q9BYQ3 159 aa9.14□□□□□ -0.95
NPM3-201ENST00000370110 H3BPC8 53 aa9.12□□□□□ -0.95
NPM3-201ENST00000370110 KRTAP3-1Q9BYR8 98 aa9.12□□□□□ -0.95
NPM3-201ENST00000370110 TRAV7A0A075B6U4 112 aa9.1□□□□□ -0.95
NPM3-201ENST00000370110 KLKP1Q107X0 134 aa9.09□□□□□ -0.95
NPM3-201ENST00000370110 S4R3F8 94 aa9.09□□□□□ -0.95
NPM3-201ENST00000370110 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
NPM3-201ENST00000370110 MACF1Q9UPN3 7388 aaKnown RBP9.07□□□□□ -0.96
NPM3-201ENST00000370110 SYNE2Q8WXH0 6885 aaKnown RBP9.03□□□□□ -0.96
NPM3-201ENST00000370110 LCA10Q71F78 164 aa8.98□□□□□ -0.97
NPM3-201ENST00000370110 A8MUN3 132 aa8.96□□□□□ -0.98
NPM3-201ENST00000370110 CSAG1Q6PB30 78 aa8.96□□□□□ -0.98
NPM3-201ENST00000370110 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
NPM3-201ENST00000370110 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
NPM3-201ENST00000370110 KRTAP19-6Q3LI70 58 aa8.91□□□□□ -0.98
NPM3-201ENST00000370110 C20orf197Q8N268 126 aa8.89□□□□□ -0.99
NPM3-201ENST00000370110 NDUFC1O43677 76 aa8.87□□□□□ -0.99
NPM3-201ENST00000370110 ANAPC13Q9BS18 74 aa8.84□□□□□ -0.99
NPM3-201ENST00000370110 KRTAP3-3Q9BYR6 98 aa8.83□□□□□ -1
NPM3-201ENST00000370110 DMAC1Q96GE9 116 aa8.82□□□□□ -1
NPM3-201ENST00000370110 COX7CP15954 63 aa8.78□□□□□ -1
NPM3-201ENST00000370110 ACYP2P14621 99 aa8.75□□□□□ -1.01
NPM3-201ENST00000370110 KRTAP6-3Q3LI67 103 aa8.73□□□□□ -1.01
NPM3-201ENST00000370110 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
NPM3-201ENST00000370110 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
NPM3-201ENST00000370110 CHKB-CPT1BH3BT56 60 aa8.67□□□□□ -1.02
NPM3-201ENST00000370110 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
NPM3-201ENST00000370110 SPTSSBQ8NFR3 76 aa8.61□□□□□ -1.03
NPM3-201ENST00000370110 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
NPM3-201ENST00000370110 CCDC179H3BU77 68 aa8.58□□□□□ -1.04
NPM3-201ENST00000370110 H0YAA0 97 aa8.57□□□□□ -1.04
NPM3-201ENST00000370110 NEBP20929 6669 aa8.54□□□□□ -1.04
NPM3-201ENST00000370110 CYSTM1Q9H1C7 97 aa8.53□□□□□ -1.04
NPM3-201ENST00000370110 H7BZZ5 65 aa8.52□□□□□ -1.05
NPM3-201ENST00000370110 SEC61GP60059 68 aa8.5□□□□□ -1.05
NPM3-201ENST00000370110 CRIPTQ9P021 101 aa8.5□□□□□ -1.05
NPM3-201ENST00000370110 COA5Q86WW8 74 aa8.46□□□□□ -1.06
NPM3-201ENST00000370110 PRO0628Q9UI54 55 aa8.46□□□□□ -1.06
NPM3-201ENST00000370110 MUC12Q9UKN1 5478 aa8.42□□□□□ -1.06
NPM3-201ENST00000370110 SPRR2GQ9BYE4 73 aa8.42□□□□□ -1.06
NPM3-201ENST00000370110 V9GYY9 64 aa8.41□□□□□ -1.06
NPM3-201ENST00000370110 P0C880 135 aa8.4□□□□□ -1.06
NPM3-201ENST00000370110 TMEM258P61165 79 aa8.37□□□□□ -1.07
NPM3-201ENST00000370110 Q5VV11 94 aa8.37□□□□□ -1.07
NPM3-201ENST00000370110 R4GN34 69 aa8.36□□□□□ -1.07
NPM3-201ENST00000370110 MT1BP07438 61 aa8.33□□□□□ -1.08
NPM3-201ENST00000370110 A6NN06 94 aa8.32□□□□□ -1.08
NPM3-201ENST00000370110 M0QZ58 72 aa8.32□□□□□ -1.08
NPM3-201ENST00000370110 KRTAP19-8Q3LI54 63 aa8.3□□□□□ -1.08
NPM3-201ENST00000370110 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
NPM3-201ENST00000370110 KRTAP20-1Q3LI63 56 aa8.28□□□□□ -1.08
NPM3-201ENST00000370110 LINC01554Q52M75 96 aa8.23□□□□□ -1.09
NPM3-201ENST00000370110 SERP1Q9Y6X1 66 aa8.22□□□□□ -1.09
NPM3-201ENST00000370110 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
NPM3-201ENST00000370110 KMT2DO14686 5537 aa8.18□□□□□ -1.1
NPM3-201ENST00000370110 KRTAP5-9P26371 169 aa8.17□□□□□ -1.1
NPM3-201ENST00000370110 PLAC4Q8WY50 150 aa8.16□□□□□ -1.1
NPM3-201ENST00000370110 MDN1Q9NU22 5596 aa8.14□□□□□ -1.11
NPM3-201ENST00000370110 SMIM26A0A096LP01 95 aa8.09□□□□□ -1.11
NPM3-201ENST00000370110 A0A1B0GU69 56 aa8.06□□□□□ -1.12
NPM3-201ENST00000370110 A0A1B0GU33 70 aa8□□□□□ -1.13
NPM3-201ENST00000370110 PMAIP1Q13794 54 aa7.99□□□□□ -1.13
NPM3-201ENST00000370110 KRTAP13-4Q3LI77 160 aa7.98□□□□□ -1.13
NPM3-201ENST00000370110 PRR15LQ9BU68 103 aa7.96□□□□□ -1.14
NPM3-201ENST00000370110 PRO2289Q9P1D8 64 aa7.95□□□□□ -1.14
NPM3-201ENST00000370110 KRTAP2-3P0C7H8 128 aa7.93□□□□□ -1.14
NPM3-201ENST00000370110 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
NPM3-201ENST00000370110 KRTAP2-4Q9BYR9 128 aa7.93□□□□□ -1.14
NPM3-201ENST00000370110 A0A0D9SG42 100 aa7.91□□□□□ -1.14
NPM3-201ENST00000370110 BRK1Q8WUW1 75 aa7.9□□□□□ -1.14
NPM3-201ENST00000370110 LINC01558Q9Y6Z2 57 aa7.88□□□□□ -1.15
NPM3-201ENST00000370110 MT1XP80297 61 aa7.84□□□□□ -1.15
NPM3-201ENST00000370110 SPRR2FQ96RM1 72 aa7.83□□□□□ -1.16
NPM3-201ENST00000370110 SPRR2EP22531 72 aa7.81□□□□□ -1.16
NPM3-201ENST00000370110 SPRR2BP35325 72 aa7.81□□□□□ -1.16
NPM3-201ENST00000370110 SPRR2AP35326 72 aa7.81□□□□□ -1.16
NPM3-201ENST00000370110 CAMK2N1Q7Z7J9 78 aa7.8□□□□□ -1.16
NPM3-201ENST00000370110 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
NPM3-201ENST00000370110 A8MU10 97 aa7.71□□□□□ -1.18
NPM3-201ENST00000370110 LCE1AQ5T7P2 110 aa7.68□□□□□ -1.18
NPM3-201ENST00000370110 UQCR11O14957 56 aa7.66□□□□□ -1.18
NPM3-201ENST00000370110 KTN1-AS1Q86SY8 53 aa7.66□□□□□ -1.18
NPM3-201ENST00000370110 KRTAP2-2Q9BYT5 123 aa7.66□□□□□ -1.18
NPM3-201ENST00000370110 KRTAP2-1Q9BYU5 128 aa7.66□□□□□ -1.18
NPM3-201ENST00000370110 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
NPM3-201ENST00000370110 KRTAP8-1Q8IUC2 63 aa7.65□□□□□ -1.18
NPM3-201ENST00000370110 PSPHP1O15172 72 aa7.63□□□□□ -1.19
NPM3-201ENST00000370110 Q1T7F1 81 aa7.63□□□□□ -1.19
NPM3-201ENST00000370110 KRTAP12-2P59991 146 aa7.62□□□□□ -1.19
NPM3-201ENST00000370110 SPRR2DP22532 72 aa7.55□□□□□ -1.2
NPM3-201ENST00000370110 MIR22HGQ0VDD5 57 aa7.54□□□□□ -1.2
NPM3-201ENST00000370110 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
NPM3-201ENST00000370110 KRTAP10-7P60409 375 aaPredicted RBP7.53□□□□□ -1.2
NPM3-201ENST00000370110 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
NPM3-201ENST00000370110 H3BS24 57 aa7.5□□□□□ -1.21
NPM3-201ENST00000370110 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
NPM3-201ENST00000370110 A6NED7 52 aa7.42□□□□□ -1.22
NPM3-201ENST00000370110 K7ERS5 55 aa7.38□□□□□ -1.23
NPM3-201ENST00000370110 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
NPM3-201ENST00000370110 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms