RNA–Protein interactions for RNA: ENST00000368881.8

PSMD4-201, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5 BASIC

Gene PSMD4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-201ENST00000368881 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
PSMD4-201ENST00000368881 LCA10Q71F78 164 aa8.82□□□□□ -1
PSMD4-201ENST00000368881 PRR15LQ9BU68 103 aa8.82□□□□□ -1
PSMD4-201ENST00000368881 SEC61GP60059 68 aa8.79□□□□□ -1
PSMD4-201ENST00000368881 A0A1B0GU69 56 aa8.77□□□□□ -1.01
PSMD4-201ENST00000368881 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
PSMD4-201ENST00000368881 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
PSMD4-201ENST00000368881 KRTAP19-2Q3LHN2 52 aa8.72□□□□□ -1.01
PSMD4-201ENST00000368881 PSPHP1O15172 72 aa8.71□□□□□ -1.02
PSMD4-201ENST00000368881 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
PSMD4-201ENST00000368881 Q5VV11 94 aa8.67□□□□□ -1.02
PSMD4-201ENST00000368881 H0YAA0 97 aa8.59□□□□□ -1.03
PSMD4-201ENST00000368881 A6NED7 52 aa8.53□□□□□ -1.04
PSMD4-201ENST00000368881 UQCR11O14957 56 aa8.53□□□□□ -1.04
PSMD4-201ENST00000368881 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
PSMD4-201ENST00000368881 A0A1B0GU33 70 aa8.48□□□□□ -1.05
PSMD4-201ENST00000368881 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
PSMD4-201ENST00000368881 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
PSMD4-201ENST00000368881 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
PSMD4-201ENST00000368881 BRK1Q8WUW1 75 aa8.41□□□□□ -1.06
PSMD4-201ENST00000368881 CDC42SE1Q9NRR8 79 aa8.41□□□□□ -1.06
PSMD4-201ENST00000368881 RNF213Q63HN8 5207 aa8.4□□□□□ -1.06
PSMD4-201ENST00000368881 MIR22HGQ0VDD5 57 aa8.39□□□□□ -1.07
PSMD4-201ENST00000368881 MT1HP80294 61 aa8.38□□□□□ -1.07
PSMD4-201ENST00000368881 SPATA8Q6RVD6 105 aa8.37□□□□□ -1.07
PSMD4-201ENST00000368881 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
PSMD4-201ENST00000368881 M0R2T5 61 aa8.36□□□□□ -1.07
PSMD4-201ENST00000368881 P0C880 135 aa8.36□□□□□ -1.07
PSMD4-201ENST00000368881 MUC2Q02817 5179 aa8.35□□□□□ -1.07
PSMD4-201ENST00000368881 M0QZ58 72 aa8.32□□□□□ -1.08
PSMD4-201ENST00000368881 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
PSMD4-201ENST00000368881 CRIPTQ9P021 101 aa8.27□□□□□ -1.09
PSMD4-201ENST00000368881 R4GN34 69 aa8.23□□□□□ -1.09
PSMD4-201ENST00000368881 KRTAP13-4Q3LI77 160 aa8.17□□□□□ -1.1
PSMD4-201ENST00000368881 A8MU10 97 aa8.13□□□□□ -1.11
PSMD4-201ENST00000368881 K7ERS5 55 aa8.13□□□□□ -1.11
PSMD4-201ENST00000368881 FAT4Q6V0I7 4981 aa8.13□□□□□ -1.11
PSMD4-201ENST00000368881 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
PSMD4-201ENST00000368881 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
PSMD4-201ENST00000368881 A0A0D9SG42 100 aa8.05□□□□□ -1.12
PSMD4-201ENST00000368881 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
PSMD4-201ENST00000368881 MT2AP02795 61 aa8.04□□□□□ -1.12
PSMD4-201ENST00000368881 KRTAP10-10P60014 251 aa8.03□□□□□ -1.12
PSMD4-201ENST00000368881 A6NN06 94 aa8.01□□□□□ -1.13
PSMD4-201ENST00000368881 MT1FP04733 61 aa7.98□□□□□ -1.13
PSMD4-201ENST00000368881 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
PSMD4-201ENST00000368881 PMAIP1Q13794 54 aa7.97□□□□□ -1.13
PSMD4-201ENST00000368881 SPRR2GQ9BYE4 73 aa7.97□□□□□ -1.13
PSMD4-201ENST00000368881 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
PSMD4-201ENST00000368881 LCE2DQ5TA82 110 aaPredicted RBP7.92□□□□□ -1.14
PSMD4-201ENST00000368881 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
PSMD4-201ENST00000368881 KRTAP9-2Q9BYQ4 174 aa7.88□□□□□ -1.15
PSMD4-201ENST00000368881 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
PSMD4-201ENST00000368881 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
PSMD4-201ENST00000368881 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
PSMD4-201ENST00000368881 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
PSMD4-201ENST00000368881 PLAC4Q8WY50 150 aa7.76□□□□□ -1.17
PSMD4-201ENST00000368881 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
PSMD4-201ENST00000368881 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
PSMD4-201ENST00000368881 ROMO1P60602 79 aa7.69□□□□□ -1.18
PSMD4-201ENST00000368881 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
PSMD4-201ENST00000368881 MT1BP07438 61 aa7.57□□□□□ -1.2
PSMD4-201ENST00000368881 SVIPQ8NHG7 77 aa7.55□□□□□ -1.2
PSMD4-201ENST00000368881 FSIP2Q5CZC0 6907 aa7.54□□□□□ -1.2
PSMD4-201ENST00000368881 LCE2BO14633 110 aa7.51□□□□□ -1.21
PSMD4-201ENST00000368881 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
PSMD4-201ENST00000368881 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
PSMD4-201ENST00000368881 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
PSMD4-201ENST00000368881 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
PSMD4-201ENST00000368881 TNP1P09430 55 aa7.37□□□□□ -1.23
PSMD4-201ENST00000368881 PRAC1Q96KF2 57 aa7.34□□□□□ -1.23
PSMD4-201ENST00000368881 MT1XP80297 61 aa7.33□□□□□ -1.24
PSMD4-201ENST00000368881 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
PSMD4-201ENST00000368881 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
PSMD4-201ENST00000368881 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
PSMD4-201ENST00000368881 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
PSMD4-201ENST00000368881 USH2AO75445 5202 aa7.05□□□□□ -1.28
PSMD4-201ENST00000368881 KRTAP10-12P60413 245 aa7.03□□□□□ -1.28
PSMD4-201ENST00000368881 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
PSMD4-201ENST00000368881 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
PSMD4-201ENST00000368881 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
PSMD4-201ENST00000368881 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.9□□□□□ -1.3
PSMD4-201ENST00000368881 SSPOA2VEC9 5147 aa6.9□□□□□ -1.31
PSMD4-201ENST00000368881 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
PSMD4-201ENST00000368881 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.33
PSMD4-201ENST00000368881 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
PSMD4-201ENST00000368881 SYNE2Q8WXH0 6885 aaKnown RBP6.68□□□□□ -1.34
PSMD4-201ENST00000368881 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
PSMD4-201ENST00000368881 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
PSMD4-201ENST00000368881 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
PSMD4-201ENST00000368881 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
PSMD4-201ENST00000368881 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
PSMD4-201ENST00000368881 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
PSMD4-201ENST00000368881 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
PSMD4-201ENST00000368881 MT1EP04732 61 aa6.45□□□□□ -1.38
PSMD4-201ENST00000368881 KMT2DO14686 5537 aa6.38□□□□□ -1.39
PSMD4-201ENST00000368881 MT1LQ93083 61 aa6.32□□□□□ -1.4
PSMD4-201ENST00000368881 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
PSMD4-201ENST00000368881 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
PSMD4-201ENST00000368881 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms