RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
LMNA-203ENST00000368297 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
LMNA-203ENST00000368297 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
LMNA-203ENST00000368297 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
LMNA-203ENST00000368297 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
LMNA-203ENST00000368297 UBR4Q5T4S7 5183 aa8.02□□□□□ -1.13
LMNA-203ENST00000368297 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
LMNA-203ENST00000368297 A6NED7 52 aa7.96□□□□□ -1.13
LMNA-203ENST00000368297 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
LMNA-203ENST00000368297 CDC42SE1Q9NRR8 79 aa7.94□□□□□ -1.14
LMNA-203ENST00000368297 A0A1B0GU69 56 aa7.93□□□□□ -1.14
LMNA-203ENST00000368297 LCA10Q71F78 164 aa7.92□□□□□ -1.14
LMNA-203ENST00000368297 A8MU10 97 aa7.92□□□□□ -1.14
LMNA-203ENST00000368297 KRTAP19-2Q3LHN2 52 aa7.91□□□□□ -1.14
LMNA-203ENST00000368297 MUC2Q02817 5179 aa7.9□□□□□ -1.14
LMNA-203ENST00000368297 SEC61GP60059 68 aa7.89□□□□□ -1.15
LMNA-203ENST00000368297 PMAIP1Q13794 54 aa7.87□□□□□ -1.15
LMNA-203ENST00000368297 S4R3F8 94 aa7.87□□□□□ -1.15
LMNA-203ENST00000368297 LCE2CQ5TA81 110 aa7.82□□□□□ -1.16
LMNA-203ENST00000368297 A6NN06 94 aa7.77□□□□□ -1.17
LMNA-203ENST00000368297 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
LMNA-203ENST00000368297 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
LMNA-203ENST00000368297 UQCR11O14957 56 aa7.72□□□□□ -1.17
LMNA-203ENST00000368297 CSAG1Q6PB30 78 aa7.71□□□□□ -1.18
LMNA-203ENST00000368297 MT1HP80294 61 aa7.7□□□□□ -1.18
LMNA-203ENST00000368297 M0R2T5 61 aa7.68□□□□□ -1.18
LMNA-203ENST00000368297 FLGP20930 4061 aaPredicted RBP7.67□□□□□ -1.18
LMNA-203ENST00000368297 FAT4Q6V0I7 4981 aa7.67□□□□□ -1.18
LMNA-203ENST00000368297 SPATA8Q6RVD6 105 aa7.67□□□□□ -1.18
LMNA-203ENST00000368297 A0A1B0GU33 70 aa7.63□□□□□ -1.19
LMNA-203ENST00000368297 MIR22HGQ0VDD5 57 aa7.63□□□□□ -1.19
LMNA-203ENST00000368297 KRTAP10-6P60371 365 aaPredicted RBP7.54□□□□□ -1.2
LMNA-203ENST00000368297 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
LMNA-203ENST00000368297 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
LMNA-203ENST00000368297 H0YAA0 97 aa7.51□□□□□ -1.21
LMNA-203ENST00000368297 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
LMNA-203ENST00000368297 P0C880 135 aa7.45□□□□□ -1.22
LMNA-203ENST00000368297 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
LMNA-203ENST00000368297 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
LMNA-203ENST00000368297 M0QZ58 72 aa7.36□□□□□ -1.23
LMNA-203ENST00000368297 MT2AP02795 61 aa7.36□□□□□ -1.23
LMNA-203ENST00000368297 K7ERS5 55 aa7.34□□□□□ -1.23
LMNA-203ENST00000368297 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
LMNA-203ENST00000368297 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
LMNA-203ENST00000368297 MT1FP04733 61 aa7.31□□□□□ -1.24
LMNA-203ENST00000368297 PRAC1Q96KF2 57 aa7.3□□□□□ -1.24
LMNA-203ENST00000368297 A0A0D9SG42 100 aa7.28□□□□□ -1.24
LMNA-203ENST00000368297 R4GN34 69 aa7.27□□□□□ -1.25
LMNA-203ENST00000368297 CRIPTQ9P021 101 aa7.24□□□□□ -1.25
LMNA-203ENST00000368297 LINC01554Q52M75 96 aa7.12□□□□□ -1.27
LMNA-203ENST00000368297 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
LMNA-203ENST00000368297 KRTAP9-3Q9BYQ3 159 aa7.11□□□□□ -1.27
LMNA-203ENST00000368297 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
LMNA-203ENST00000368297 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
LMNA-203ENST00000368297 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
LMNA-203ENST00000368297 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
LMNA-203ENST00000368297 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
LMNA-203ENST00000368297 ROMO1P60602 79 aa6.99□□□□□ -1.29
LMNA-203ENST00000368297 LCE2BO14633 110 aa6.95□□□□□ -1.3
LMNA-203ENST00000368297 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
LMNA-203ENST00000368297 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
LMNA-203ENST00000368297 LCE2DQ5TA82 110 aaPredicted RBP6.9□□□□□ -1.31
LMNA-203ENST00000368297 PLAC4Q8WY50 150 aa6.9□□□□□ -1.31
LMNA-203ENST00000368297 MT1BP07438 61 aa6.87□□□□□ -1.31
LMNA-203ENST00000368297 CAMK2N1Q7Z7J9 78 aa6.85□□□□□ -1.31
LMNA-203ENST00000368297 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
LMNA-203ENST00000368297 USH2AO75445 5202 aa6.74□□□□□ -1.33
LMNA-203ENST00000368297 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
LMNA-203ENST00000368297 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
LMNA-203ENST00000368297 MT1XP80297 61 aa6.6□□□□□ -1.35
LMNA-203ENST00000368297 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
LMNA-203ENST00000368297 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
LMNA-203ENST00000368297 KRTAP19-6Q3LI70 58 aa6.56□□□□□ -1.36
LMNA-203ENST00000368297 TNP1P09430 55 aa6.54□□□□□ -1.36
LMNA-203ENST00000368297 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
LMNA-203ENST00000368297 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
LMNA-203ENST00000368297 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
LMNA-203ENST00000368297 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
LMNA-203ENST00000368297 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
LMNA-203ENST00000368297 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
LMNA-203ENST00000368297 H3BS24 57 aa6.33□□□□□ -1.4
LMNA-203ENST00000368297 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
LMNA-203ENST00000368297 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
LMNA-203ENST00000368297 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
LMNA-203ENST00000368297 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
LMNA-203ENST00000368297 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
LMNA-203ENST00000368297 NDUFAF8A1L188 74 aa6.12□□□□□ -1.43
LMNA-203ENST00000368297 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
LMNA-203ENST00000368297 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
LMNA-203ENST00000368297 MACF1Q9UPN3 7388 aaKnown RBP6.04□□□□□ -1.44
LMNA-203ENST00000368297 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
LMNA-203ENST00000368297 KMT2DO14686 5537 aa6.01□□□□□ -1.45
LMNA-203ENST00000368297 KRTAP9-7A8MTY7 169 aa5.99□□□□□ -1.45
LMNA-203ENST00000368297 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
LMNA-203ENST00000368297 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
LMNA-203ENST00000368297 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
LMNA-203ENST00000368297 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
LMNA-203ENST00000368297 LUZP6Q538Z0 58 aa5.85□□□□□ -1.47
LMNA-203ENST00000368297 MT1EP04732 61 aa5.81□□□□□ -1.48
LMNA-203ENST00000368297 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms