RNA–Protein interactions for RNA: ENST00000368001.1

USP21-202, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 1 (best) BASIC

Gene USP21, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-202ENST00000368001 KRTAP4-1Q9BYQ7 146 aa11.2□□□□□ -0.62
USP21-202ENST00000368001 KRTAP3-1Q9BYR8 98 aa11.15□□□□□ -0.62
USP21-202ENST00000368001 MUC2Q02817 5179 aa11.15□□□□□ -0.62
USP21-202ENST00000368001 A6NED7 52 aa11.13□□□□□ -0.63
USP21-202ENST00000368001 A8MU10 97 aa11.12□□□□□ -0.63
USP21-202ENST00000368001 COX6B2Q6YFQ2 88 aa11.07□□□□□ -0.64
USP21-202ENST00000368001 UBR4Q5T4S7 5183 aa11.06□□□□□ -0.64
USP21-202ENST00000368001 LCA10Q71F78 164 aa11.05□□□□□ -0.64
USP21-202ENST00000368001 CDC42SE1Q9NRR8 79 aa10.99□□□□□ -0.65
USP21-202ENST00000368001 SPTSSBQ8NFR3 76 aa10.94□□□□□ -0.66
USP21-202ENST00000368001 PMAIP1Q13794 54 aa10.93□□□□□ -0.66
USP21-202ENST00000368001 A0A1B0GU69 56 aa10.9□□□□□ -0.66
USP21-202ENST00000368001 RBM12B-AS1Q9P1G2 102 aa10.9□□□□□ -0.66
USP21-202ENST00000368001 RNF213Q63HN8 5207 aa10.88□□□□□ -0.67
USP21-202ENST00000368001 KRTAP19-2Q3LHN2 52 aa10.86□□□□□ -0.67
USP21-202ENST00000368001 H1FX-AS1Q4G0G2 97 aa10.81□□□□□ -0.68
USP21-202ENST00000368001 KRTAP3-3Q9BYR6 98 aa10.75□□□□□ -0.69
USP21-202ENST00000368001 A6NN06 94 aa10.73□□□□□ -0.69
USP21-202ENST00000368001 S4R3F8 94 aa10.73□□□□□ -0.69
USP21-202ENST00000368001 UQCR11O14957 56 aa10.67□□□□□ -0.7
USP21-202ENST00000368001 SPATA8Q6RVD6 105 aa10.67□□□□□ -0.7
USP21-202ENST00000368001 FAT4Q6V0I7 4981 aa10.66□□□□□ -0.7
USP21-202ENST00000368001 KTN1-AS1Q86SY8 53 aa10.64□□□□□ -0.71
USP21-202ENST00000368001 MIR22HGQ0VDD5 57 aa10.63□□□□□ -0.71
USP21-202ENST00000368001 LCE2CQ5TA81 110 aa10.63□□□□□ -0.71
USP21-202ENST00000368001 FLGP20930 4061 aaPredicted RBP10.62□□□□□ -0.71
USP21-202ENST00000368001 SEC61GP60059 68 aa10.62□□□□□ -0.71
USP21-202ENST00000368001 CSAG1Q6PB30 78 aa10.46□□□□□ -0.73
USP21-202ENST00000368001 MT1HP80294 61 aa10.4□□□□□ -0.75
USP21-202ENST00000368001 A0A1B0GU33 70 aa10.35□□□□□ -0.75
USP21-202ENST00000368001 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
USP21-202ENST00000368001 H0YAA0 97 aa10.32□□□□□ -0.76
USP21-202ENST00000368001 KRTAP10-6P60371 365 aaPredicted RBP10.31□□□□□ -0.76
USP21-202ENST00000368001 ADM2Q7Z4H4 148 aa10.29□□□□□ -0.76
USP21-202ENST00000368001 P0C880 135 aa10.28□□□□□ -0.76
USP21-202ENST00000368001 M0R2T5 61 aa10.23□□□□□ -0.77
USP21-202ENST00000368001 PRAC1Q96KF2 57 aa10.21□□□□□ -0.77
USP21-202ENST00000368001 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
USP21-202ENST00000368001 KRTAP13-4Q3LI77 160 aa10.08□□□□□ -0.8
USP21-202ENST00000368001 LCE2AQ5TA79 106 aaPredicted RBP10.03□□□□□ -0.8
USP21-202ENST00000368001 KRTAP9-8Q9BYQ0 159 aa10.01□□□□□ -0.81
USP21-202ENST00000368001 K7ERS5 55 aa9.99□□□□□ -0.81
USP21-202ENST00000368001 MT2AP02795 61 aa9.97□□□□□ -0.81
USP21-202ENST00000368001 MT1FP04733 61 aa9.94□□□□□ -0.82
USP21-202ENST00000368001 M0QZ58 72 aa9.89□□□□□ -0.83
USP21-202ENST00000368001 R4GN34 69 aa9.89□□□□□ -0.83
USP21-202ENST00000368001 A0A0D9SG42 100 aa9.86□□□□□ -0.83
USP21-202ENST00000368001 KRTAP10-10P60014 251 aa9.84□□□□□ -0.83
USP21-202ENST00000368001 LINC01554Q52M75 96 aa9.83□□□□□ -0.84
USP21-202ENST00000368001 CRIPTQ9P021 101 aa9.75□□□□□ -0.85
USP21-202ENST00000368001 KRTAP25-1Q3LHN0 102 aa9.73□□□□□ -0.85
USP21-202ENST00000368001 KRTAP19-1Q8IUB9 90 aa9.73□□□□□ -0.85
USP21-202ENST00000368001 ROMO1P60602 79 aa9.71□□□□□ -0.85
USP21-202ENST00000368001 SPRR2GQ9BYE4 73 aa9.68□□□□□ -0.86
USP21-202ENST00000368001 KRTAP9-3Q9BYQ3 159 aa9.64□□□□□ -0.87
USP21-202ENST00000368001 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
USP21-202ENST00000368001 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
USP21-202ENST00000368001 SPINT4Q6UDR6 99 aa9.57□□□□□ -0.88
USP21-202ENST00000368001 LCE2BO14633 110 aa9.43□□□□□ -0.9
USP21-202ENST00000368001 KRTAP19-8Q3LI54 63 aa9.43□□□□□ -0.9
USP21-202ENST00000368001 MT1BP07438 61 aa9.38□□□□□ -0.91
USP21-202ENST00000368001 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
USP21-202ENST00000368001 USH2AO75445 5202 aa9.28□□□□□ -0.92
USP21-202ENST00000368001 PLAC4Q8WY50 150 aa9.27□□□□□ -0.93
USP21-202ENST00000368001 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
USP21-202ENST00000368001 MT1XP80297 61 aa9.06□□□□□ -0.96
USP21-202ENST00000368001 FSIP2Q5CZC0 6907 aa9.05□□□□□ -0.96
USP21-202ENST00000368001 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
USP21-202ENST00000368001 KRTAP10-5P60370 271 aa9.04□□□□□ -0.96
USP21-202ENST00000368001 SSPOA2VEC9 5147 aa8.97□□□□□ -0.97
USP21-202ENST00000368001 KRTAP9-2Q9BYQ4 174 aa8.82□□□□□ -1
USP21-202ENST00000368001 PRO2289Q9P1D8 64 aa8.82□□□□□ -1
USP21-202ENST00000368001 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
USP21-202ENST00000368001 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
USP21-202ENST00000368001 TNP1P09430 55 aa8.76□□□□□ -1.01
USP21-202ENST00000368001 KRTAP10-7P60409 375 aaPredicted RBP8.73□□□□□ -1.01
USP21-202ENST00000368001 PP632Q6XCG6 107 aa8.68□□□□□ -1.02
USP21-202ENST00000368001 H3BS24 57 aa8.65□□□□□ -1.02
USP21-202ENST00000368001 FCGBPQ9Y6R7 5405 aaPredicted RBP8.59□□□□□ -1.03
USP21-202ENST00000368001 KMT2DO14686 5537 aa8.55□□□□□ -1.04
USP21-202ENST00000368001 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
USP21-202ENST00000368001 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
USP21-202ENST00000368001 NDUFAF8A1L188 74 aa8.5□□□□□ -1.05
USP21-202ENST00000368001 CRCT1Q9UGL9 99 aa8.47□□□□□ -1.05
USP21-202ENST00000368001 KRTAP23-1A1A580 65 aa8.45□□□□□ -1.06
USP21-202ENST00000368001 KRTAP4-8A0A0G2JLE6 195 aa8.43□□□□□ -1.06
USP21-202ENST00000368001 KRTAP4-8Q9BYQ9 185 aa8.43□□□□□ -1.06
USP21-202ENST00000368001 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
USP21-202ENST00000368001 MACF1Q9UPN3 7388 aaKnown RBP8.19□□□□□ -1.1
USP21-202ENST00000368001 KRTAP19-5Q3LI72 72 aa8.17□□□□□ -1.1
USP21-202ENST00000368001 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
USP21-202ENST00000368001 LUZP6Q538Z0 58 aa8.12□□□□□ -1.11
USP21-202ENST00000368001 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
USP21-202ENST00000368001 KRTAP19-7Q3SYF9 63 aa8.09□□□□□ -1.11
USP21-202ENST00000368001 SYNE2Q8WXH0 6885 aaKnown RBP8□□□□□ -1.13
USP21-202ENST00000368001 SPRR5A0A1B0GTR4 108 aa7.99□□□□□ -1.13
USP21-202ENST00000368001 MT1EP04732 61 aa7.93□□□□□ -1.14
USP21-202ENST00000368001 MUC12Q9UKN1 5478 aa7.89□□□□□ -1.15
USP21-202ENST00000368001 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.87□□□□□ -1.15
USP21-202ENST00000368001 SPRR2FQ96RM1 72 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms