RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 RBM12B-AS1Q9P1G2 102 aa8.59□□□□□ -1.03
SDCBP2-202ENST00000360779 A6NED7 52 aa8.58□□□□□ -1.04
SDCBP2-202ENST00000360779 COA5Q86WW8 74 aa8.58□□□□□ -1.04
SDCBP2-202ENST00000360779 LINC01558Q9Y6Z2 57 aa8.58□□□□□ -1.04
SDCBP2-202ENST00000360779 LCA10Q71F78 164 aa8.55□□□□□ -1.04
SDCBP2-202ENST00000360779 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
SDCBP2-202ENST00000360779 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
SDCBP2-202ENST00000360779 SPTSSBQ8NFR3 76 aa8.54□□□□□ -1.04
SDCBP2-202ENST00000360779 A8MU10 97 aa8.49□□□□□ -1.05
SDCBP2-202ENST00000360779 COX6B2Q6YFQ2 88 aa8.48□□□□□ -1.05
SDCBP2-202ENST00000360779 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
SDCBP2-202ENST00000360779 ACYP2P14621 99 aa8.4□□□□□ -1.06
SDCBP2-202ENST00000360779 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
SDCBP2-202ENST00000360779 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
SDCBP2-202ENST00000360779 UBR4Q5T4S7 5183 aa8.32□□□□□ -1.08
SDCBP2-202ENST00000360779 S4R3F8 94 aa8.29□□□□□ -1.08
SDCBP2-202ENST00000360779 RNF213Q63HN8 5207 aa8.29□□□□□ -1.08
SDCBP2-202ENST00000360779 MUC2Q02817 5179 aa8.2□□□□□ -1.1
SDCBP2-202ENST00000360779 KRTAP19-2Q3LHN2 52 aa8.2□□□□□ -1.1
SDCBP2-202ENST00000360779 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
SDCBP2-202ENST00000360779 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
SDCBP2-202ENST00000360779 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
SDCBP2-202ENST00000360779 A0A1B0GU69 56 aa8.09□□□□□ -1.11
SDCBP2-202ENST00000360779 M0R2T5 61 aa8.09□□□□□ -1.11
SDCBP2-202ENST00000360779 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
SDCBP2-202ENST00000360779 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
SDCBP2-202ENST00000360779 UQCR11O14957 56 aa8.07□□□□□ -1.12
SDCBP2-202ENST00000360779 MT1HP80294 61 aa8.03□□□□□ -1.12
SDCBP2-202ENST00000360779 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
SDCBP2-202ENST00000360779 PRAC1Q96KF2 57 aa8.03□□□□□ -1.12
SDCBP2-202ENST00000360779 FAT4Q6V0I7 4981 aa7.98□□□□□ -1.13
SDCBP2-202ENST00000360779 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
SDCBP2-202ENST00000360779 ADM2Q7Z4H4 148 aa7.93□□□□□ -1.14
SDCBP2-202ENST00000360779 H3BS24 57 aa7.88□□□□□ -1.15
SDCBP2-202ENST00000360779 H0YAA0 97 aa7.81□□□□□ -1.16
SDCBP2-202ENST00000360779 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
SDCBP2-202ENST00000360779 KRTAP10-6P60371 365 aaPredicted RBP7.78□□□□□ -1.16
SDCBP2-202ENST00000360779 P0C880 135 aa7.75□□□□□ -1.17
SDCBP2-202ENST00000360779 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
SDCBP2-202ENST00000360779 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
SDCBP2-202ENST00000360779 KRTAP10-10P60014 251 aa7.69□□□□□ -1.18
SDCBP2-202ENST00000360779 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
SDCBP2-202ENST00000360779 A0A1B0GU33 70 aa7.68□□□□□ -1.18
SDCBP2-202ENST00000360779 MT2AP02795 61 aa7.68□□□□□ -1.18
SDCBP2-202ENST00000360779 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
SDCBP2-202ENST00000360779 R4GN34 69 aa7.63□□□□□ -1.19
SDCBP2-202ENST00000360779 MT1FP04733 61 aa7.62□□□□□ -1.19
SDCBP2-202ENST00000360779 M0QZ58 72 aa7.62□□□□□ -1.19
SDCBP2-202ENST00000360779 ROMO1P60602 79 aa7.6□□□□□ -1.19
SDCBP2-202ENST00000360779 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
SDCBP2-202ENST00000360779 K7ERS5 55 aa7.56□□□□□ -1.2
SDCBP2-202ENST00000360779 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
SDCBP2-202ENST00000360779 A0A0D9SG42 100 aa7.47□□□□□ -1.21
SDCBP2-202ENST00000360779 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
SDCBP2-202ENST00000360779 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
SDCBP2-202ENST00000360779 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
SDCBP2-202ENST00000360779 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
SDCBP2-202ENST00000360779 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
SDCBP2-202ENST00000360779 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
SDCBP2-202ENST00000360779 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
SDCBP2-202ENST00000360779 LCE2BO14633 110 aa7.23□□□□□ -1.25
SDCBP2-202ENST00000360779 KRTAP12-1P59990 96 aa7.23□□□□□ -1.25
SDCBP2-202ENST00000360779 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
SDCBP2-202ENST00000360779 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
SDCBP2-202ENST00000360779 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
SDCBP2-202ENST00000360779 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
SDCBP2-202ENST00000360779 MT1BP07438 61 aa7.16□□□□□ -1.26
SDCBP2-202ENST00000360779 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
SDCBP2-202ENST00000360779 USH2AO75445 5202 aa6.99□□□□□ -1.29
SDCBP2-202ENST00000360779 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
SDCBP2-202ENST00000360779 NDUFAF8A1L188 74 aa6.96□□□□□ -1.29
SDCBP2-202ENST00000360779 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
SDCBP2-202ENST00000360779 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
SDCBP2-202ENST00000360779 MT1XP80297 61 aa6.89□□□□□ -1.31
SDCBP2-202ENST00000360779 KRTAP10-5P60370 271 aa6.87□□□□□ -1.31
SDCBP2-202ENST00000360779 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
SDCBP2-202ENST00000360779 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
SDCBP2-202ENST00000360779 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
SDCBP2-202ENST00000360779 TNP1P09430 55 aa6.74□□□□□ -1.33
SDCBP2-202ENST00000360779 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
SDCBP2-202ENST00000360779 A0A0A0MQY5 61 aa6.6□□□□□ -1.35
SDCBP2-202ENST00000360779 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
SDCBP2-202ENST00000360779 LUZP6Q538Z0 58 aa6.56□□□□□ -1.36
SDCBP2-202ENST00000360779 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
SDCBP2-202ENST00000360779 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
SDCBP2-202ENST00000360779 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
SDCBP2-202ENST00000360779 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
SDCBP2-202ENST00000360779 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
SDCBP2-202ENST00000360779 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
SDCBP2-202ENST00000360779 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
SDCBP2-202ENST00000360779 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
SDCBP2-202ENST00000360779 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
SDCBP2-202ENST00000360779 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
SDCBP2-202ENST00000360779 KMT2DO14686 5537 aa6.23□□□□□ -1.41
SDCBP2-202ENST00000360779 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
SDCBP2-202ENST00000360779 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.42
SDCBP2-202ENST00000360779 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
SDCBP2-202ENST00000360779 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
SDCBP2-202ENST00000360779 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.43
SDCBP2-202ENST00000360779 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms