RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 RBM12B-AS1Q9P1G2 102 aa12.87□□□□□ -0.35
TRADD-201ENST00000345057 A0A1B0GU69 56 aa12.8□□□□□ -0.36
TRADD-201ENST00000345057 PRO0628Q9UI54 55 aa12.77□□□□□ -0.37
TRADD-201ENST00000345057 H1FX-AS1Q4G0G2 97 aa12.76□□□□□ -0.37
TRADD-201ENST00000345057 SEC61GP60059 68 aa12.72□□□□□ -0.37
TRADD-201ENST00000345057 S4R3F8 94 aa12.72□□□□□ -0.37
TRADD-201ENST00000345057 LCA10Q71F78 164 aa12.66□□□□□ -0.38
TRADD-201ENST00000345057 BRK1Q8WUW1 75 aa12.66□□□□□ -0.38
TRADD-201ENST00000345057 MUC17Q685J3 4493 aa12.66□□□□□ -0.38
TRADD-201ENST00000345057 A6NED7 52 aa12.64□□□□□ -0.39
TRADD-201ENST00000345057 UBR4Q5T4S7 5183 aa12.64□□□□□ -0.39
TRADD-201ENST00000345057 KRTAP3-3Q9BYR6 98 aa12.59□□□□□ -0.39
TRADD-201ENST00000345057 KRTAP4-1Q9BYQ7 146 aa12.55□□□□□ -0.4
TRADD-201ENST00000345057 UQCR11O14957 56 aa12.48□□□□□ -0.41
TRADD-201ENST00000345057 CDC42SE1Q9NRR8 79 aa12.46□□□□□ -0.42
TRADD-201ENST00000345057 CSAG1Q6PB30 78 aa12.44□□□□□ -0.42
TRADD-201ENST00000345057 RNF213Q63HN8 5207 aa12.35□□□□□ -0.43
TRADD-201ENST00000345057 A0A1B0GU33 70 aa12.32□□□□□ -0.44
TRADD-201ENST00000345057 MIR22HGQ0VDD5 57 aa12.32□□□□□ -0.44
TRADD-201ENST00000345057 SPATA8Q6RVD6 105 aa12.31□□□□□ -0.44
TRADD-201ENST00000345057 KRTAP19-2Q3LHN2 52 aa12.28□□□□□ -0.44
TRADD-201ENST00000345057 A8MU10 97 aa12.25□□□□□ -0.45
TRADD-201ENST00000345057 KRTAP10-6P60371 365 aaPredicted RBP12.21□□□□□ -0.45
TRADD-201ENST00000345057 H0YAA0 97 aa12.2□□□□□ -0.46
TRADD-201ENST00000345057 KRTAP3-2Q9BYR7 98 aa12.2□□□□□ -0.46
TRADD-201ENST00000345057 MUC2Q02817 5179 aa12.19□□□□□ -0.46
TRADD-201ENST00000345057 ADM2Q7Z4H4 148 aa12.16□□□□□ -0.46
TRADD-201ENST00000345057 P0C880 135 aa12.07□□□□□ -0.48
TRADD-201ENST00000345057 PMAIP1Q13794 54 aa12□□□□□ -0.49
TRADD-201ENST00000345057 FLGP20930 4061 aaPredicted RBP11.98□□□□□ -0.49
TRADD-201ENST00000345057 M0QZ58 72 aa11.92□□□□□ -0.5
TRADD-201ENST00000345057 LCE2CQ5TA81 110 aa11.91□□□□□ -0.5
TRADD-201ENST00000345057 KRTAP13-4Q3LI77 160 aa11.88□□□□□ -0.51
TRADD-201ENST00000345057 A6NN06 94 aa11.85□□□□□ -0.51
TRADD-201ENST00000345057 K7ERS5 55 aa11.83□□□□□ -0.52
TRADD-201ENST00000345057 FAT4Q6V0I7 4981 aa11.82□□□□□ -0.52
TRADD-201ENST00000345057 R4GN34 69 aa11.76□□□□□ -0.53
TRADD-201ENST00000345057 A0A0D9SG42 100 aa11.74□□□□□ -0.53
TRADD-201ENST00000345057 MT1HP80294 61 aa11.69□□□□□ -0.54
TRADD-201ENST00000345057 M0R2T5 61 aa11.68□□□□□ -0.54
TRADD-201ENST00000345057 KTN1-AS1Q86SY8 53 aa11.66□□□□□ -0.54
TRADD-201ENST00000345057 CRIPTQ9P021 101 aa11.63□□□□□ -0.55
TRADD-201ENST00000345057 LORP23490 312 aaPredicted RBP11.57□□□□□ -0.56
TRADD-201ENST00000345057 LCE2AQ5TA79 106 aaPredicted RBP11.53□□□□□ -0.56
TRADD-201ENST00000345057 LINC01554Q52M75 96 aa11.5□□□□□ -0.57
TRADD-201ENST00000345057 KRTAP12-1P59990 96 aa11.49□□□□□ -0.57
TRADD-201ENST00000345057 SPINT4Q6UDR6 99 aa11.47□□□□□ -0.57
TRADD-201ENST00000345057 KRTAP12-2P59991 146 aa11.46□□□□□ -0.58
TRADD-201ENST00000345057 ROMO1P60602 79 aa11.29□□□□□ -0.6
TRADD-201ENST00000345057 KRTAP9-8Q9BYQ0 159 aa11.28□□□□□ -0.6
TRADD-201ENST00000345057 MT2AP02795 61 aa11.27□□□□□ -0.6
TRADD-201ENST00000345057 KRTAP10-10P60014 251 aa11.25□□□□□ -0.61
TRADD-201ENST00000345057 SPRR2GQ9BYE4 73 aa11.23□□□□□ -0.61
TRADD-201ENST00000345057 MT1FP04733 61 aa11.2□□□□□ -0.62
TRADD-201ENST00000345057 KRTAP19-1Q8IUB9 90 aa11.1□□□□□ -0.63
TRADD-201ENST00000345057 PRAC1Q96KF2 57 aa11.1□□□□□ -0.63
TRADD-201ENST00000345057 CAMK2N1Q7Z7J9 78 aa11.05□□□□□ -0.64
TRADD-201ENST00000345057 PLAC4Q8WY50 150 aa10.98□□□□□ -0.65
TRADD-201ENST00000345057 KRTAP25-1Q3LHN0 102 aa10.89□□□□□ -0.67
TRADD-201ENST00000345057 KRTAP19-8Q3LI54 63 aa10.89□□□□□ -0.67
TRADD-201ENST00000345057 KRTAP9-3Q9BYQ3 159 aa10.87□□□□□ -0.67
TRADD-201ENST00000345057 KRTAP9-2Q9BYQ4 174 aa10.85□□□□□ -0.67
TRADD-201ENST00000345057 C10orf95Q9H7T3 257 aa10.84□□□□□ -0.67
TRADD-201ENST00000345057 LCE2DQ5TA82 110 aaPredicted RBP10.76□□□□□ -0.69
TRADD-201ENST00000345057 MT1BP07438 61 aa10.66□□□□□ -0.7
TRADD-201ENST00000345057 TNP1P09430 55 aa10.57□□□□□ -0.72
TRADD-201ENST00000345057 FSIP2Q5CZC0 6907 aa10.55□□□□□ -0.72
TRADD-201ENST00000345057 LCE2BO14633 110 aa10.49□□□□□ -0.73
TRADD-201ENST00000345057 PP632Q6XCG6 107 aa10.44□□□□□ -0.74
TRADD-201ENST00000345057 PRO2289Q9P1D8 64 aa10.39□□□□□ -0.75
TRADD-201ENST00000345057 MT1XP80297 61 aa10.38□□□□□ -0.75
TRADD-201ENST00000345057 KRTAP10-5P60370 271 aa10.38□□□□□ -0.75
TRADD-201ENST00000345057 USH2AO75445 5202 aa10.36□□□□□ -0.75
TRADD-201ENST00000345057 KRTAP23-1A1A580 65 aa10.36□□□□□ -0.75
TRADD-201ENST00000345057 KRTAP9-6A0A140TA67 174 aa10.33□□□□□ -0.76
TRADD-201ENST00000345057 CRCT1Q9UGL9 99 aa10.32□□□□□ -0.76
TRADD-201ENST00000345057 H3BS24 57 aa10.32□□□□□ -0.76
TRADD-201ENST00000345057 SSPOA2VEC9 5147 aa10.19□□□□□ -0.78
TRADD-201ENST00000345057 KRTAP10-12P60413 245 aa10□□□□□ -0.81
TRADD-201ENST00000345057 LCE3AQ5TA76 89 aa9.98□□□□□ -0.81
TRADD-201ENST00000345057 KRTAP10-7P60409 375 aaPredicted RBP9.96□□□□□ -0.81
TRADD-201ENST00000345057 KRTAP19-6Q3LI70 58 aa9.88□□□□□ -0.83
TRADD-201ENST00000345057 FCGBPQ9Y6R7 5405 aaPredicted RBP9.88□□□□□ -0.83
TRADD-201ENST00000345057 KRTAP8-1Q8IUC2 63 aa9.84□□□□□ -0.83
TRADD-201ENST00000345057 KRTAP15-1Q3LI76 137 aa9.65□□□□□ -0.86
TRADD-201ENST00000345057 KRTAP12-3P60328 96 aa9.62□□□□□ -0.87
TRADD-201ENST00000345057 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.59□□□□□ -0.87
TRADD-201ENST00000345057 MACF1Q9UPN3 7388 aaKnown RBP9.53□□□□□ -0.88
TRADD-201ENST00000345057 KRTAP4-8A0A0G2JLE6 195 aa9.48□□□□□ -0.89
TRADD-201ENST00000345057 KRTAP4-8Q9BYQ9 185 aa9.48□□□□□ -0.89
TRADD-201ENST00000345057 KRTAP19-5Q3LI72 72 aa9.44□□□□□ -0.9
TRADD-201ENST00000345057 SYNE2Q8WXH0 6885 aaKnown RBP9.4□□□□□ -0.91
TRADD-201ENST00000345057 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
TRADD-201ENST00000345057 KMT2DO14686 5537 aa9.34□□□□□ -0.91
TRADD-201ENST00000345057 KRTAP9-7A8MTY7 169 aa9.34□□□□□ -0.91
TRADD-201ENST00000345057 SPRR5A0A1B0GTR4 108 aa9.25□□□□□ -0.93
TRADD-201ENST00000345057 KRTAP19-7Q3SYF9 63 aa9.25□□□□□ -0.93
TRADD-201ENST00000345057 LUZP6Q538Z0 58 aa9.17□□□□□ -0.94
TRADD-201ENST00000345057 KRTAP19-4Q3LI73 84 aa9.12□□□□□ -0.95
TRADD-201ENST00000345057 MT1EP04732 61 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms