RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 MACF1Q9UPN3 7388 aaKnown RBP9.09□□□□□ -0.95
CDHR4-201ENST00000343366 SYNE2Q8WXH0 6885 aaKnown RBP9.08□□□□□ -0.96
CDHR4-201ENST00000343366 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
CDHR4-201ENST00000343366 S4R3F8 94 aa9.08□□□□□ -0.96
CDHR4-201ENST00000343366 COX7CP15954 63 aa9.04□□□□□ -0.96
CDHR4-201ENST00000343366 C20orf197Q8N268 126 aa9.04□□□□□ -0.96
CDHR4-201ENST00000343366 LCE2BO14633 110 aa9.02□□□□□ -0.97
CDHR4-201ENST00000343366 SNURFQ9Y675 71 aa9□□□□□ -0.97
CDHR4-201ENST00000343366 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
CDHR4-201ENST00000343366 CSAG1Q6PB30 78 aa8.98□□□□□ -0.97
CDHR4-201ENST00000343366 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
CDHR4-201ENST00000343366 LCA10Q71F78 164 aa8.97□□□□□ -0.97
CDHR4-201ENST00000343366 MT2AP02795 61 aa8.96□□□□□ -0.98
CDHR4-201ENST00000343366 SPANXA2-OT1Q8N9U9 137 aa8.95□□□□□ -0.98
CDHR4-201ENST00000343366 NDUFC1O43677 76 aa8.93□□□□□ -0.98
CDHR4-201ENST00000343366 ACYP2P14621 99 aa8.92□□□□□ -0.98
CDHR4-201ENST00000343366 KRTAP9-3Q9BYQ3 159 aa8.92□□□□□ -0.98
CDHR4-201ENST00000343366 MT1FP04733 61 aa8.9□□□□□ -0.98
CDHR4-201ENST00000343366 KRTAP3-3Q9BYR6 98 aa8.86□□□□□ -0.99
CDHR4-201ENST00000343366 KRTAP10-10P60014 251 aa8.81□□□□□ -1
CDHR4-201ENST00000343366 KRTAP19-6Q3LI70 58 aa8.8□□□□□ -1
CDHR4-201ENST00000343366 SPTSSBQ8NFR3 76 aa8.78□□□□□ -1
CDHR4-201ENST00000343366 H7BZZ5 65 aa8.76□□□□□ -1.01
CDHR4-201ENST00000343366 KRTAP6-3Q3LI67 103 aa8.75□□□□□ -1.01
CDHR4-201ENST00000343366 H0YAA0 97 aa8.74□□□□□ -1.01
CDHR4-201ENST00000343366 CHKB-CPT1BH3BT56 60 aa8.73□□□□□ -1.01
CDHR4-201ENST00000343366 CCDC179H3BU77 68 aa8.69□□□□□ -1.02
CDHR4-201ENST00000343366 CYSTM1Q9H1C7 97 aa8.66□□□□□ -1.02
CDHR4-201ENST00000343366 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
CDHR4-201ENST00000343366 CRIPTQ9P021 101 aa8.61□□□□□ -1.03
CDHR4-201ENST00000343366 NEBP20929 6669 aa8.61□□□□□ -1.03
CDHR4-201ENST00000343366 COA5Q86WW8 74 aa8.59□□□□□ -1.03
CDHR4-201ENST00000343366 ADM2Q7Z4H4 148 aa8.56□□□□□ -1.04
CDHR4-201ENST00000343366 TMEM258P61165 79 aa8.53□□□□□ -1.04
CDHR4-201ENST00000343366 MUC12Q9UKN1 5478 aa8.51□□□□□ -1.05
CDHR4-201ENST00000343366 SPRR2GQ9BYE4 73 aa8.46□□□□□ -1.06
CDHR4-201ENST00000343366 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
CDHR4-201ENST00000343366 P0C880 135 aa8.38□□□□□ -1.07
CDHR4-201ENST00000343366 SEC61GP60059 68 aa8.38□□□□□ -1.07
CDHR4-201ENST00000343366 R4GN34 69 aa8.37□□□□□ -1.07
CDHR4-201ENST00000343366 KRTAP20-1Q3LI63 56 aa8.34□□□□□ -1.07
CDHR4-201ENST00000343366 SERP1Q9Y6X1 66 aa8.32□□□□□ -1.08
CDHR4-201ENST00000343366 PCP4P48539 62 aa8.31□□□□□ -1.08
CDHR4-201ENST00000343366 KRTAP19-8Q3LI54 63 aa8.31□□□□□ -1.08
CDHR4-201ENST00000343366 Q5VV11 94 aa8.3□□□□□ -1.08
CDHR4-201ENST00000343366 M0QZ58 72 aa8.28□□□□□ -1.08
CDHR4-201ENST00000343366 MDN1Q9NU22 5596 aa8.2□□□□□ -1.1
CDHR4-201ENST00000343366 A0A1B0GU69 56 aa8.19□□□□□ -1.1
CDHR4-201ENST00000343366 KMT2DO14686 5537 aa8.18□□□□□ -1.1
CDHR4-201ENST00000343366 MT1BP07438 61 aa8.17□□□□□ -1.1
CDHR4-201ENST00000343366 PRR15LQ9BU68 103 aa8.16□□□□□ -1.1
CDHR4-201ENST00000343366 KRTAP5-9P26371 169 aa8.15□□□□□ -1.1
CDHR4-201ENST00000343366 A0A1B0GU33 70 aa8.11□□□□□ -1.11
CDHR4-201ENST00000343366 PLAC4Q8WY50 150 aa8.11□□□□□ -1.11
CDHR4-201ENST00000343366 LINC01558Q9Y6Z2 57 aa8.11□□□□□ -1.11
CDHR4-201ENST00000343366 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
CDHR4-201ENST00000343366 A6NN06 94 aa8.06□□□□□ -1.12
CDHR4-201ENST00000343366 V9GYY9 64 aa8.05□□□□□ -1.12
CDHR4-201ENST00000343366 RPS28P62857 69 aaKnown RBP8□□□□□ -1.13
CDHR4-201ENST00000343366 KRTAP13-4Q3LI77 160 aa7.99□□□□□ -1.13
CDHR4-201ENST00000343366 KRTAP2-3P0C7H8 128 aa7.97□□□□□ -1.13
CDHR4-201ENST00000343366 KRTAP2-4Q9BYR9 128 aa7.97□□□□□ -1.13
CDHR4-201ENST00000343366 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.14
CDHR4-201ENST00000343366 SMIM26A0A096LP01 95 aa7.95□□□□□ -1.14
CDHR4-201ENST00000343366 KRTAP10-5P60370 271 aa7.95□□□□□ -1.14
CDHR4-201ENST00000343366 Q1T7F1 81 aa7.94□□□□□ -1.14
CDHR4-201ENST00000343366 SPATA8Q6RVD6 105 aa7.92□□□□□ -1.14
CDHR4-201ENST00000343366 UQCR11O14957 56 aa7.87□□□□□ -1.15
CDHR4-201ENST00000343366 A0A0D9SG42 100 aa7.84□□□□□ -1.15
CDHR4-201ENST00000343366 MT1XP80297 61 aa7.79□□□□□ -1.16
CDHR4-201ENST00000343366 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
CDHR4-201ENST00000343366 PSPHP1O15172 72 aa7.75□□□□□ -1.17
CDHR4-201ENST00000343366 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
CDHR4-201ENST00000343366 KRTAP12-1P59990 96 aa7.72□□□□□ -1.17
CDHR4-201ENST00000343366 A8MU10 97 aa7.69□□□□□ -1.18
CDHR4-201ENST00000343366 MIR22HGQ0VDD5 57 aa7.69□□□□□ -1.18
CDHR4-201ENST00000343366 KRTAP2-2Q9BYT5 123 aa7.69□□□□□ -1.18
CDHR4-201ENST00000343366 KRTAP2-1Q9BYU5 128 aa7.69□□□□□ -1.18
CDHR4-201ENST00000343366 SPRR2EP22531 72 aa7.66□□□□□ -1.18
CDHR4-201ENST00000343366 SPRR2BP35325 72 aa7.66□□□□□ -1.18
CDHR4-201ENST00000343366 SPRR2AP35326 72 aa7.66□□□□□ -1.18
CDHR4-201ENST00000343366 KRTAP12-2P59991 146 aa7.64□□□□□ -1.19
CDHR4-201ENST00000343366 SPRR2FQ96RM1 72 aa7.63□□□□□ -1.19
CDHR4-201ENST00000343366 A6NED7 52 aa7.58□□□□□ -1.2
CDHR4-201ENST00000343366 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
CDHR4-201ENST00000343366 K7ERS5 55 aa7.56□□□□□ -1.2
CDHR4-201ENST00000343366 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
CDHR4-201ENST00000343366 KRTAP10-7P60409 375 aaPredicted RBP7.42□□□□□ -1.22
CDHR4-201ENST00000343366 SPRR2DP22532 72 aa7.41□□□□□ -1.22
CDHR4-201ENST00000343366 GPR98Q8WXG9 6306 aa7.41□□□□□ -1.22
CDHR4-201ENST00000343366 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
CDHR4-201ENST00000343366 CDC42SE1Q9NRR8 79 aa7.38□□□□□ -1.23
CDHR4-201ENST00000343366 TNP1P09430 55 aa7.32□□□□□ -1.24
CDHR4-201ENST00000343366 C10orf95Q9H7T3 257 aa7.3□□□□□ -1.24
CDHR4-201ENST00000343366 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
CDHR4-201ENST00000343366 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
CDHR4-201ENST00000343366 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
CDHR4-201ENST00000343366 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
CDHR4-201ENST00000343366 DSTQ03001 7570 aaKnown RBP7.12□□□□□ -1.27
CDHR4-201ENST00000343366 ROMO1P60602 79 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms