RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
DUSP28-201ENST00000343217 COA5Q86WW8 74 aa10.57□□□□□ -0.72
DUSP28-201ENST00000343217 KRTAP3-1Q9BYR8 98 aa10.56□□□□□ -0.72
DUSP28-201ENST00000343217 MT1HP80294 61 aa10.56□□□□□ -0.72
DUSP28-201ENST00000343217 CHKB-CPT1BH3BT56 60 aa10.48□□□□□ -0.73
DUSP28-201ENST00000343217 H1FX-AS1Q4G0G2 97 aa10.43□□□□□ -0.74
DUSP28-201ENST00000343217 FLGP20930 4061 aaPredicted RBP10.42□□□□□ -0.74
DUSP28-201ENST00000343217 SMIM26A0A096LP01 95 aa10.39□□□□□ -0.75
DUSP28-201ENST00000343217 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
DUSP28-201ENST00000343217 KRTAP10-6P60371 365 aaPredicted RBP10.37□□□□□ -0.75
DUSP28-201ENST00000343217 SPTSSBQ8NFR3 76 aa10.35□□□□□ -0.75
DUSP28-201ENST00000343217 S4R3F8 94 aa10.33□□□□□ -0.76
DUSP28-201ENST00000343217 CRCT1Q9UGL9 99 aa10.32□□□□□ -0.76
DUSP28-201ENST00000343217 FSIP2Q5CZC0 6907 aa10.3□□□□□ -0.76
DUSP28-201ENST00000343217 M0R2T5 61 aa10.29□□□□□ -0.76
DUSP28-201ENST00000343217 LCA10Q71F78 164 aa10.27□□□□□ -0.76
DUSP28-201ENST00000343217 V9GYY9 64 aa10.23□□□□□ -0.77
DUSP28-201ENST00000343217 Q1T7F1 81 aa10.21□□□□□ -0.78
DUSP28-201ENST00000343217 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.78
DUSP28-201ENST00000343217 LINC01558Q9Y6Z2 57 aa10.15□□□□□ -0.78
DUSP28-201ENST00000343217 CSAG1Q6PB30 78 aa10.14□□□□□ -0.79
DUSP28-201ENST00000343217 A0A1B0GU69 56 aa10.03□□□□□ -0.8
DUSP28-201ENST00000343217 SEC61GP60059 68 aa10.03□□□□□ -0.8
DUSP28-201ENST00000343217 PRR15LQ9BU68 103 aa10.03□□□□□ -0.8
DUSP28-201ENST00000343217 KRTAP9-8Q9BYQ0 159 aa9.99□□□□□ -0.81
DUSP28-201ENST00000343217 PSPHP1O15172 72 aa9.97□□□□□ -0.81
DUSP28-201ENST00000343217 H0YAA0 97 aa9.92□□□□□ -0.82
DUSP28-201ENST00000343217 Q5VV11 94 aa9.9□□□□□ -0.82
DUSP28-201ENST00000343217 ADM2Q7Z4H4 148 aa9.84□□□□□ -0.83
DUSP28-201ENST00000343217 KRTAP3-2Q9BYR7 98 aa9.82□□□□□ -0.84
DUSP28-201ENST00000343217 MT2AP02795 61 aa9.81□□□□□ -0.84
DUSP28-201ENST00000343217 USH2AO75445 5202 aa9.79□□□□□ -0.84
DUSP28-201ENST00000343217 A0A1B0GU33 70 aa9.75□□□□□ -0.85
DUSP28-201ENST00000343217 P0C880 135 aa9.74□□□□□ -0.85
DUSP28-201ENST00000343217 UQCR11O14957 56 aa9.73□□□□□ -0.85
DUSP28-201ENST00000343217 MT1FP04733 61 aa9.73□□□□□ -0.85
DUSP28-201ENST00000343217 SSPOA2VEC9 5147 aa9.73□□□□□ -0.85
DUSP28-201ENST00000343217 A6NED7 52 aa9.71□□□□□ -0.85
DUSP28-201ENST00000343217 KRTAP9-3Q9BYQ3 159 aa9.67□□□□□ -0.86
DUSP28-201ENST00000343217 LCE2BO14633 110 aa9.65□□□□□ -0.86
DUSP28-201ENST00000343217 KRTAP10-10P60014 251 aa9.65□□□□□ -0.86
DUSP28-201ENST00000343217 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.63□□□□□ -0.87
DUSP28-201ENST00000343217 M0QZ58 72 aa9.58□□□□□ -0.88
DUSP28-201ENST00000343217 MIR22HGQ0VDD5 57 aa9.58□□□□□ -0.88
DUSP28-201ENST00000343217 SPATA8Q6RVD6 105 aa9.56□□□□□ -0.88
DUSP28-201ENST00000343217 CDC42SE1Q9NRR8 79 aa9.54□□□□□ -0.88
DUSP28-201ENST00000343217 CRIPTQ9P021 101 aa9.54□□□□□ -0.88
DUSP28-201ENST00000343217 FCGBPQ9Y6R7 5405 aaPredicted RBP9.54□□□□□ -0.88
DUSP28-201ENST00000343217 KRTAP9-7A8MTY7 169 aa9.54□□□□□ -0.88
DUSP28-201ENST00000343217 R4GN34 69 aa9.54□□□□□ -0.88
DUSP28-201ENST00000343217 KRTAP19-1Q8IUB9 90 aa9.53□□□□□ -0.88
DUSP28-201ENST00000343217 BRK1Q8WUW1 75 aa9.52□□□□□ -0.89
DUSP28-201ENST00000343217 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
DUSP28-201ENST00000343217 A8MU10 97 aa9.37□□□□□ -0.91
DUSP28-201ENST00000343217 KRTAP19-6Q3LI70 58 aa9.35□□□□□ -0.91
DUSP28-201ENST00000343217 A0A0D9SG42 100 aa9.33□□□□□ -0.92
DUSP28-201ENST00000343217 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
DUSP28-201ENST00000343217 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
DUSP28-201ENST00000343217 PRO0628Q9UI54 55 aa9.29□□□□□ -0.92
DUSP28-201ENST00000343217 K7ERS5 55 aa9.23□□□□□ -0.93
DUSP28-201ENST00000343217 A6NN06 94 aa9.22□□□□□ -0.93
DUSP28-201ENST00000343217 MACF1Q9UPN3 7388 aaKnown RBP9.22□□□□□ -0.93
DUSP28-201ENST00000343217 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
DUSP28-201ENST00000343217 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.95
DUSP28-201ENST00000343217 SYNE2Q8WXH0 6885 aaKnown RBP9.14□□□□□ -0.95
DUSP28-201ENST00000343217 KRTAP12-2P59991 146 aa9.12□□□□□ -0.95
DUSP28-201ENST00000343217 KRTAP19-8Q3LI54 63 aa9.07□□□□□ -0.96
DUSP28-201ENST00000343217 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
DUSP28-201ENST00000343217 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
DUSP28-201ENST00000343217 KRTAP6-3Q3LI67 103 aa8.96□□□□□ -0.97
DUSP28-201ENST00000343217 MT1BP07438 61 aa8.91□□□□□ -0.98
DUSP28-201ENST00000343217 CAMK2N1Q7Z7J9 78 aa8.91□□□□□ -0.98
DUSP28-201ENST00000343217 ROMO1P60602 79 aa8.78□□□□□ -1
DUSP28-201ENST00000343217 KRTAP10-5P60370 271 aa8.73□□□□□ -1.01
DUSP28-201ENST00000343217 C10orf95Q9H7T3 257 aa8.67□□□□□ -1.02
DUSP28-201ENST00000343217 KTN1-AS1Q86SY8 53 aa8.62□□□□□ -1.03
DUSP28-201ENST00000343217 PRO2289Q9P1D8 64 aa8.62□□□□□ -1.03
DUSP28-201ENST00000343217 NEBP20929 6669 aa8.61□□□□□ -1.03
DUSP28-201ENST00000343217 MUC12Q9UKN1 5478 aa8.61□□□□□ -1.03
DUSP28-201ENST00000343217 MT1XP80297 61 aa8.61□□□□□ -1.03
DUSP28-201ENST00000343217 SVIPQ8NHG7 77 aa8.55□□□□□ -1.04
DUSP28-201ENST00000343217 KRTAP5-9P26371 169 aa8.52□□□□□ -1.05
DUSP28-201ENST00000343217 KRTAP25-1Q3LHN0 102 aa8.5□□□□□ -1.05
DUSP28-201ENST00000343217 TNP1P09430 55 aa8.49□□□□□ -1.05
DUSP28-201ENST00000343217 KMT2DO14686 5537 aa8.4□□□□□ -1.06
DUSP28-201ENST00000343217 PRAC1Q96KF2 57 aa8.39□□□□□ -1.07
DUSP28-201ENST00000343217 MDN1Q9NU22 5596 aa8.34□□□□□ -1.07
DUSP28-201ENST00000343217 KRTAP20-1Q3LI63 56 aa8.34□□□□□ -1.07
DUSP28-201ENST00000343217 KRTAP23-1A1A580 65 aa8.25□□□□□ -1.09
DUSP28-201ENST00000343217 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
DUSP28-201ENST00000343217 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
DUSP28-201ENST00000343217 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
DUSP28-201ENST00000343217 SPRR2FQ96RM1 72 aa8.18□□□□□ -1.1
DUSP28-201ENST00000343217 KRTAP8-1Q8IUC2 63 aa8.1□□□□□ -1.11
DUSP28-201ENST00000343217 KRTAP2-3P0C7H8 128 aa8.1□□□□□ -1.11
DUSP28-201ENST00000343217 SPRR2EP22531 72 aa8.1□□□□□ -1.11
DUSP28-201ENST00000343217 SPRR2BP35325 72 aa8.1□□□□□ -1.11
DUSP28-201ENST00000343217 SPRR2AP35326 72 aa8.1□□□□□ -1.11
DUSP28-201ENST00000343217 KRTAP2-4Q9BYR9 128 aa8.1□□□□□ -1.11
DUSP28-201ENST00000343217 LCE3AQ5TA76 89 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms