RNA–Protein interactions for RNA: ENST00000342835.8

SPTB-201, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 1,723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-201ENST00000342835 A6NED7 52 aa11.32□□□□□ -0.6
SPTB-201ENST00000342835 SEC61GP60059 68 aa11.29□□□□□ -0.6
SPTB-201ENST00000342835 SEC61BP60468 96 aaKnown RBP11.26□□□□□ -0.61
SPTB-201ENST00000342835 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
SPTB-201ENST00000342835 CDC42SE1Q9NRR8 79 aa11.18□□□□□ -0.62
SPTB-201ENST00000342835 H1FX-AS1Q4G0G2 97 aa11.15□□□□□ -0.63
SPTB-201ENST00000342835 S4R3F8 94 aa11.15□□□□□ -0.63
SPTB-201ENST00000342835 UQCR11O14957 56 aa11.11□□□□□ -0.63
SPTB-201ENST00000342835 LCA10Q71F78 164 aa11.09□□□□□ -0.63
SPTB-201ENST00000342835 PMAIP1Q13794 54 aa11.08□□□□□ -0.64
SPTB-201ENST00000342835 HMCN2Q8NDA2 5059 aa11.07□□□□□ -0.64
SPTB-201ENST00000342835 LRP2P98164 4655 aa11.02□□□□□ -0.64
SPTB-201ENST00000342835 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
SPTB-201ENST00000342835 MIR22HGQ0VDD5 57 aa10.99□□□□□ -0.65
SPTB-201ENST00000342835 SPATA8Q6RVD6 105 aa10.99□□□□□ -0.65
SPTB-201ENST00000342835 A8MU10 97 aa10.98□□□□□ -0.65
SPTB-201ENST00000342835 LPAP08519 4548 aa10.97□□□□□ -0.65
SPTB-201ENST00000342835 A0A1B0GU33 70 aa10.92□□□□□ -0.66
SPTB-201ENST00000342835 CSAG1Q6PB30 78 aa10.87□□□□□ -0.67
SPTB-201ENST00000342835 KRTAP4-1Q9BYQ7 146 aa10.8□□□□□ -0.68
SPTB-201ENST00000342835 MUC17Q685J3 4493 aa10.78□□□□□ -0.68
SPTB-201ENST00000342835 UBR4Q5T4S7 5183 aa10.76□□□□□ -0.69
SPTB-201ENST00000342835 H0YAA0 97 aa10.73□□□□□ -0.69
SPTB-201ENST00000342835 KRTAP10-6P60371 365 aaPredicted RBP10.73□□□□□ -0.69
SPTB-201ENST00000342835 KTN1-AS1Q86SY8 53 aa10.72□□□□□ -0.69
SPTB-201ENST00000342835 KRTAP3-2Q9BYR7 98 aa10.71□□□□□ -0.69
SPTB-201ENST00000342835 A6NN06 94 aa10.69□□□□□ -0.7
SPTB-201ENST00000342835 ADM2Q7Z4H4 148 aa10.66□□□□□ -0.7
SPTB-201ENST00000342835 P0C880 135 aa10.58□□□□□ -0.72
SPTB-201ENST00000342835 KRTAP19-2Q3LHN2 52 aa10.58□□□□□ -0.72
SPTB-201ENST00000342835 K7ERS5 55 aa10.53□□□□□ -0.72
SPTB-201ENST00000342835 M0QZ58 72 aa10.48□□□□□ -0.73
SPTB-201ENST00000342835 RNF213Q63HN8 5207 aa10.48□□□□□ -0.73
SPTB-201ENST00000342835 KRTAP13-4Q3LI77 160 aa10.46□□□□□ -0.74
SPTB-201ENST00000342835 A0A0D9SG42 100 aa10.36□□□□□ -0.75
SPTB-201ENST00000342835 R4GN34 69 aa10.3□□□□□ -0.76
SPTB-201ENST00000342835 MUC2Q02817 5179 aa10.26□□□□□ -0.77
SPTB-201ENST00000342835 FLGP20930 4061 aaPredicted RBP10.24□□□□□ -0.77
SPTB-201ENST00000342835 LCE2CQ5TA81 110 aa10.21□□□□□ -0.77
SPTB-201ENST00000342835 KRTAP12-1P59990 96 aa10.14□□□□□ -0.79
SPTB-201ENST00000342835 CRIPTQ9P021 101 aa10.13□□□□□ -0.79
SPTB-201ENST00000342835 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
SPTB-201ENST00000342835 KRTAP12-2P59991 146 aa10.1□□□□□ -0.79
SPTB-201ENST00000342835 LORP23490 312 aaPredicted RBP10.07□□□□□ -0.8
SPTB-201ENST00000342835 ROMO1P60602 79 aa10.07□□□□□ -0.8
SPTB-201ENST00000342835 LINC01554Q52M75 96 aa10.07□□□□□ -0.8
SPTB-201ENST00000342835 M0R2T5 61 aa10.04□□□□□ -0.8
SPTB-201ENST00000342835 MT1HP80294 61 aa10.02□□□□□ -0.8
SPTB-201ENST00000342835 PRAC1Q96KF2 57 aa10.02□□□□□ -0.8
SPTB-201ENST00000342835 FAT4Q6V0I7 4981 aa9.97□□□□□ -0.81
SPTB-201ENST00000342835 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
SPTB-201ENST00000342835 KRTAP25-1Q3LHN0 102 aa9.79□□□□□ -0.84
SPTB-201ENST00000342835 SPRR2GQ9BYE4 73 aa9.73□□□□□ -0.85
SPTB-201ENST00000342835 MT2AP02795 61 aa9.71□□□□□ -0.85
SPTB-201ENST00000342835 CAMK2N1Q7Z7J9 78 aa9.7□□□□□ -0.86
SPTB-201ENST00000342835 KRTAP10-10P60014 251 aa9.7□□□□□ -0.86
SPTB-201ENST00000342835 KRTAP9-8Q9BYQ0 159 aa9.68□□□□□ -0.86
SPTB-201ENST00000342835 MT1FP04733 61 aa9.65□□□□□ -0.87
SPTB-201ENST00000342835 H3BS24 57 aa9.62□□□□□ -0.87
SPTB-201ENST00000342835 KRTAP19-1Q8IUB9 90 aa9.62□□□□□ -0.87
SPTB-201ENST00000342835 PLAC4Q8WY50 150 aa9.57□□□□□ -0.88
SPTB-201ENST00000342835 C10orf95Q9H7T3 257 aa9.55□□□□□ -0.88
SPTB-201ENST00000342835 KRTAP19-8Q3LI54 63 aa9.42□□□□□ -0.9
SPTB-201ENST00000342835 KRTAP9-2Q9BYQ4 174 aa9.41□□□□□ -0.9
SPTB-201ENST00000342835 KRTAP9-3Q9BYQ3 159 aa9.33□□□□□ -0.92
SPTB-201ENST00000342835 TNP1P09430 55 aa9.3□□□□□ -0.92
SPTB-201ENST00000342835 PP632Q6XCG6 107 aa9.28□□□□□ -0.92
SPTB-201ENST00000342835 MT1BP07438 61 aa9.22□□□□□ -0.93
SPTB-201ENST00000342835 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
SPTB-201ENST00000342835 KRTAP23-1A1A580 65 aa9.17□□□□□ -0.94
SPTB-201ENST00000342835 PRO2289Q9P1D8 64 aa9.02□□□□□ -0.97
SPTB-201ENST00000342835 KRTAP9-6A0A140TA67 174 aa9.01□□□□□ -0.97
SPTB-201ENST00000342835 KRTAP10-5P60370 271 aa9□□□□□ -0.97
SPTB-201ENST00000342835 MT1XP80297 61 aa9□□□□□ -0.97
SPTB-201ENST00000342835 FSIP2Q5CZC0 6907 aa8.99□□□□□ -0.97
SPTB-201ENST00000342835 LCE2BO14633 110 aa8.98□□□□□ -0.97
SPTB-201ENST00000342835 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
SPTB-201ENST00000342835 USH2AO75445 5202 aa8.76□□□□□ -1.01
SPTB-201ENST00000342835 LCE3AQ5TA76 89 aa8.74□□□□□ -1.01
SPTB-201ENST00000342835 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
SPTB-201ENST00000342835 KRTAP15-1Q3LI76 137 aa8.72□□□□□ -1.01
SPTB-201ENST00000342835 SSPOA2VEC9 5147 aa8.65□□□□□ -1.03
SPTB-201ENST00000342835 KRTAP10-7P60409 375 aaPredicted RBP8.64□□□□□ -1.03
SPTB-201ENST00000342835 KRTAP8-1Q8IUC2 63 aa8.63□□□□□ -1.03
SPTB-201ENST00000342835 NDUFAF8A1L188 74 aa8.51□□□□□ -1.05
SPTB-201ENST00000342835 KRTAP12-3P60328 96 aa8.43□□□□□ -1.06
SPTB-201ENST00000342835 KRTAP19-6Q3LI70 58 aa8.43□□□□□ -1.06
SPTB-201ENST00000342835 FCGBPQ9Y6R7 5405 aaPredicted RBP8.42□□□□□ -1.06
SPTB-201ENST00000342835 A0A0A0MQY5 61 aa8.31□□□□□ -1.08
SPTB-201ENST00000342835 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
SPTB-201ENST00000342835 SPRR5A0A1B0GTR4 108 aa8.26□□□□□ -1.09
SPTB-201ENST00000342835 LUZP6Q538Z0 58 aa8.26□□□□□ -1.09
SPTB-201ENST00000342835 KRTAP19-5Q3LI72 72 aa8.22□□□□□ -1.09
SPTB-201ENST00000342835 KRTAP4-8A0A0G2JLE6 195 aa8.16□□□□□ -1.1
SPTB-201ENST00000342835 KRTAP4-8Q9BYQ9 185 aa8.16□□□□□ -1.1
SPTB-201ENST00000342835 KRTAP9-7A8MTY7 169 aa8.12□□□□□ -1.11
SPTB-201ENST00000342835 MACF1Q9UPN3 7388 aaKnown RBP8.1□□□□□ -1.11
SPTB-201ENST00000342835 KRTAP19-7Q3SYF9 63 aa8.01□□□□□ -1.13
SPTB-201ENST00000342835 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
SPTB-201ENST00000342835 SYNE2Q8WXH0 6885 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms